RNA–Protein interactions for RNA: ENST00000399523.5

UFD1-202, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 1 (best) BASIC

Gene UFD1, Length 1,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-202ENST00000399523 LCE3AQ5TA76 89 aa5.9□□□□□ -1.46
UFD1-202ENST00000399523 MUC5ACP98088 5654 aa5.88□□□□□ -1.47
UFD1-202ENST00000399523 CCDC179H3BU77 68 aa5.87□□□□□ -1.47
UFD1-202ENST00000399523 SYNE1Q8NF91 8797 aaKnown RBP5.86□□□□□ -1.47
UFD1-202ENST00000399523 MUC5BQ9HC84 5762 aaPredicted RBP5.84□□□□□ -1.47
UFD1-202ENST00000399523 SPINT4Q6UDR6 99 aa5.84□□□□□ -1.47
UFD1-202ENST00000399523 KRTAP12-1P59990 96 aa5.78□□□□□ -1.48
UFD1-202ENST00000399523 TMEM258P61165 79 aa5.78□□□□□ -1.48
UFD1-202ENST00000399523 KRTAP5-8O75690 187 aa5.74□□□□□ -1.49
UFD1-202ENST00000399523 SPATA8Q6RVD6 105 aa5.74□□□□□ -1.49
UFD1-202ENST00000399523 ATP5EP56381 51 aaPredicted RBP5.72□□□□□ -1.49
UFD1-202ENST00000399523 TNP1P09430 55 aa5.69□□□□□ -1.5
UFD1-202ENST00000399523 KRTAP12-3P60328 96 aa5.68□□□□□ -1.5
UFD1-202ENST00000399523 KRTAP5-2Q701N4 177 aa5.67□□□□□ -1.5
UFD1-202ENST00000399523 H7BZZ5 65 aa5.66□□□□□ -1.5
UFD1-202ENST00000399523 RPS28P62857 69 aaKnown RBP5.65□□□□□ -1.5
UFD1-202ENST00000399523 H3BS24 57 aa5.64□□□□□ -1.51
UFD1-202ENST00000399523 SNURFQ9Y675 71 aa5.63□□□□□ -1.51
UFD1-202ENST00000399523 SERP1Q9Y6X1 66 aa5.58□□□□□ -1.52
UFD1-202ENST00000399523 A0A1B0GU33 70 aa5.57□□□□□ -1.52
UFD1-202ENST00000399523 SEC61GP60059 68 aa5.57□□□□□ -1.52
UFD1-202ENST00000399523 KRTAP9-9Q9BYP9 154 aa5.54□□□□□ -1.52
UFD1-202ENST00000399523 SPANXA2-OT1Q8N9U9 137 aa5.53□□□□□ -1.52
UFD1-202ENST00000399523 OBSCNQ5VST9 7968 aa5.46□□□□□ -1.54
UFD1-202ENST00000399523 SMIM26A0A096LP01 95 aa5.45□□□□□ -1.54
UFD1-202ENST00000399523 COA5Q86WW8 74 aa5.4□□□□□ -1.54
UFD1-202ENST00000399523 KRTAP6-1Q3LI64 71 aa5.39□□□□□ -1.55
UFD1-202ENST00000399523 A8MU10 97 aa5.38□□□□□ -1.55
UFD1-202ENST00000399523 MT1AP04731 61 aa5.37□□□□□ -1.55
UFD1-202ENST00000399523 V9GYY9 64 aa5.36□□□□□ -1.55
UFD1-202ENST00000399523 KRTAP19-4Q3LI73 84 aa5.35□□□□□ -1.55
UFD1-202ENST00000399523 Q1T7F1 81 aa5.31□□□□□ -1.56
UFD1-202ENST00000399523 KRTAP6-2Q3LI66 62 aa5.28□□□□□ -1.56
UFD1-202ENST00000399523 KRTAP9-4Q9BYQ2 154 aa5.28□□□□□ -1.56
UFD1-202ENST00000399523 KRTAP5-1Q6L8H4 278 aa5.22□□□□□ -1.57
UFD1-202ENST00000399523 LINC01558Q9Y6Z2 57 aa5.18□□□□□ -1.58
UFD1-202ENST00000399523 LCE3CQ5T5A8 94 aa5.17□□□□□ -1.58
UFD1-202ENST00000399523 A0A1B0GU69 56 aa5.13□□□□□ -1.59
UFD1-202ENST00000399523 KRTAP25-1Q3LHN0 102 aa5.13□□□□□ -1.59
UFD1-202ENST00000399523 PRR15LQ9BU68 103 aa5.13□□□□□ -1.59
UFD1-202ENST00000399523 PSPHP1O15172 72 aa5.11□□□□□ -1.59
UFD1-202ENST00000399523 PRO0628Q9UI54 55 aa5.1□□□□□ -1.59
UFD1-202ENST00000399523 KRTAP4-12Q9BQ66 201 aa5.09□□□□□ -1.59
UFD1-202ENST00000399523 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
UFD1-202ENST00000399523 BRK1Q8WUW1 75 aa5.06□□□□□ -1.6
UFD1-202ENST00000399523 A6NED7 52 aa5.02□□□□□ -1.61
UFD1-202ENST00000399523 CDC42SE1Q9NRR8 79 aa4.99□□□□□ -1.61
UFD1-202ENST00000399523 MT3P25713 68 aa4.95□□□□□ -1.62
UFD1-202ENST00000399523 UQCR11O14957 56 aa4.94□□□□□ -1.62
UFD1-202ENST00000399523 KRTAP9-6A8MVA2 160 aa4.92□□□□□ -1.62
UFD1-202ENST00000399523 KRTAP4-2Q9BYR5 136 aa4.88□□□□□ -1.63
UFD1-202ENST00000399523 MIR22HGQ0VDD5 57 aa4.87□□□□□ -1.63
UFD1-202ENST00000399523 A0A0A0MQY5 61 aa4.84□□□□□ -1.63
UFD1-202ENST00000399523 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
UFD1-202ENST00000399523 PMAIP1Q13794 54 aa4.8□□□□□ -1.64
UFD1-202ENST00000399523 LCE1EQ5T753 118 aa4.74□□□□□ -1.65
UFD1-202ENST00000399523 K7ERS5 55 aa4.72□□□□□ -1.65
UFD1-202ENST00000399523 KTN1-AS1Q86SY8 53 aa4.71□□□□□ -1.66
UFD1-202ENST00000399523 ROMO1P60602 79 aa4.47□□□□□ -1.69
UFD1-202ENST00000399523 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
UFD1-202ENST00000399523 LCE1CQ5T751 118 aa4.4□□□□□ -1.71
UFD1-202ENST00000399523 PRAC1Q96KF2 57 aa4.39□□□□□ -1.71
UFD1-202ENST00000399523 KRTAP5-11Q6L8G4 156 aa4.18□□□□□ -1.74
UFD1-202ENST00000399523 LCE1FQ5T754 118 aa4.11□□□□□ -1.75
UFD1-202ENST00000399523 PHGR1C9JFL3 82 aa4.03□□□□□ -1.76
UFD1-202ENST00000399523 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
UFD1-202ENST00000399523 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
UFD1-202ENST00000399523 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
UFD1-202ENST00000399523 KRTAP21-2Q3LI59 83 aa3.57□□□□□ -1.84
UFD1-202ENST00000399523 LCE3DQ9BYE3 92 aa3.57□□□□□ -1.84
UFD1-202ENST00000399523 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.87
UFD1-202ENST00000399523 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
UFD1-202ENST00000399523 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
UFD1-202ENST00000399523 INE1O15225 51 aa3.13□□□□□ -1.91
UFD1-202ENST00000399523 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
UFD1-202ENST00000399523 MUC16Q8WXI7 14507 aa2.43□□□□□ -2.02
UFD1-202ENST00000399523 PRM1P04553 51 aa2.3□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 5.4 ms