RNA–Protein interactions for RNA: ENST00000399196.1

LINC00243-201, long intergenic non-protein coding RNA 243, humanhuman

TSL 2 BASIC

Gene LINC00243, Length 2,052 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00243-201ENST00000399196 KRTAP12-3P60328 96 aa3.56□□□□□ -1.84
LINC00243-201ENST00000399196 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
LINC00243-201ENST00000399196 KRTAP19-5Q3LI72 72 aa3.53□□□□□ -1.84
LINC00243-201ENST00000399196 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.53□□□□□ -1.84
LINC00243-201ENST00000399196 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
LINC00243-201ENST00000399196 SYNE2Q8WXH0 6885 aaKnown RBP3.51□□□□□ -1.85
LINC00243-201ENST00000399196 LOC100996750A0A140TA64 210 aa3.49□□□□□ -1.85
LINC00243-201ENST00000399196 KRTAP4-6Q9BYQ5 205 aa3.49□□□□□ -1.85
LINC00243-201ENST00000399196 KRTAP19-7Q3SYF9 63 aa3.47□□□□□ -1.85
LINC00243-201ENST00000399196 LCE1AQ5T7P2 110 aa3.43□□□□□ -1.86
LINC00243-201ENST00000399196 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
LINC00243-201ENST00000399196 MT1EP04732 61 aa3.39□□□□□ -1.87
LINC00243-201ENST00000399196 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
LINC00243-201ENST00000399196 KRTAP6-3Q3LI67 103 aa3.36□□□□□ -1.87
LINC00243-201ENST00000399196 SPRR2FQ96RM1 72 aa3.35□□□□□ -1.87
LINC00243-201ENST00000399196 MT3P25713 68 aa3.34□□□□□ -1.88
LINC00243-201ENST00000399196 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.88
LINC00243-201ENST00000399196 KRTAP4-7Q9BYR0 210 aa3.34□□□□□ -1.88
LINC00243-201ENST00000399196 MT1LQ93083 61 aa3.32□□□□□ -1.88
LINC00243-201ENST00000399196 MDN1Q9NU22 5596 aa3.31□□□□□ -1.88
LINC00243-201ENST00000399196 KRTAP9-6A8MVA2 160 aa3.27□□□□□ -1.89
LINC00243-201ENST00000399196 KRTAP19-3Q7Z4W3 81 aa3.25□□□□□ -1.89
LINC00243-201ENST00000399196 MT1GP13640 62 aa3.23□□□□□ -1.89
LINC00243-201ENST00000399196 NEBP20929 6669 aa3.22□□□□□ -1.89
LINC00243-201ENST00000399196 SPRR2EP22531 72 aa3.21□□□□□ -1.89
LINC00243-201ENST00000399196 SPRR2BP35325 72 aa3.21□□□□□ -1.89
LINC00243-201ENST00000399196 SPRR2AP35326 72 aa3.21□□□□□ -1.89
LINC00243-201ENST00000399196 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
LINC00243-201ENST00000399196 MT1MQ8N339 61 aa3.19□□□□□ -1.9
LINC00243-201ENST00000399196 LCE1EQ5T753 118 aa3.15□□□□□ -1.9
LINC00243-201ENST00000399196 DSTQ03001 7570 aaKnown RBP3.1□□□□□ -1.91
LINC00243-201ENST00000399196 SPRR2DP22532 72 aa3.1□□□□□ -1.91
LINC00243-201ENST00000399196 KRTAP20-1Q3LI63 56 aa3.05□□□□□ -1.92
LINC00243-201ENST00000399196 LCE1DQ5T752 114 aa3.02□□□□□ -1.93
LINC00243-201ENST00000399196 KRTAP2-3P0C7H8 128 aa3□□□□□ -1.93
LINC00243-201ENST00000399196 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
LINC00243-201ENST00000399196 KRTAP2-4Q9BYR9 128 aa3□□□□□ -1.93
LINC00243-201ENST00000399196 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
LINC00243-201ENST00000399196 LCE3BQ5TA77 95 aa2.99□□□□□ -1.93
LINC00243-201ENST00000399196 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
LINC00243-201ENST00000399196 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
LINC00243-201ENST00000399196 KRTAP4-12Q9BQ66 201 aa2.92□□□□□ -1.94
LINC00243-201ENST00000399196 KRTAP5-3Q6L8H2 238 aa2.89□□□□□ -1.95
LINC00243-201ENST00000399196 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
LINC00243-201ENST00000399196 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
LINC00243-201ENST00000399196 KRTAP6-1Q3LI64 71 aa2.83□□□□□ -1.96
LINC00243-201ENST00000399196 MT1AP04731 61 aa2.82□□□□□ -1.96
LINC00243-201ENST00000399196 SYNE1Q8NF91 8797 aaKnown RBP2.81□□□□□ -1.96
LINC00243-201ENST00000399196 KRTAP5-4Q6L8H1 288 aa2.78□□□□□ -1.96
LINC00243-201ENST00000399196 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
LINC00243-201ENST00000399196 KRTAP4-9Q9BYQ8 210 aa2.75□□□□□ -1.97
LINC00243-201ENST00000399196 MT4P47944 62 aa2.72□□□□□ -1.97
LINC00243-201ENST00000399196 KRTAP4-2Q9BYR5 136 aa2.67□□□□□ -1.98
LINC00243-201ENST00000399196 KRTAP20-2Q3LI61 65 aa2.61□□□□□ -1.99
LINC00243-201ENST00000399196 KRTAP6-2Q3LI66 62 aa2.59□□□□□ -2
LINC00243-201ENST00000399196 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
LINC00243-201ENST00000399196 KRTAP5-2Q701N4 177 aa2.5□□□□□ -2.01
LINC00243-201ENST00000399196 KRTAP4-11Q9BYQ6 195 aa2.49□□□□□ -2.01
LINC00243-201ENST00000399196 KRTAP5-7Q6L8G8 165 aa2.48□□□□□ -2.01
LINC00243-201ENST00000399196 AHNAK2Q8IVF2 5795 aa2.46□□□□□ -2.02
LINC00243-201ENST00000399196 PRM1P04553 51 aa2.4□□□□□ -2.03
LINC00243-201ENST00000399196 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
LINC00243-201ENST00000399196 AHNAKQ09666 5890 aaKnown RBP2.34□□□□□ -2.04
LINC00243-201ENST00000399196 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
LINC00243-201ENST00000399196 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
LINC00243-201ENST00000399196 KRTAP5-1Q6L8H4 278 aa2.19□□□□□ -2.06
LINC00243-201ENST00000399196 MUC5ACP98088 5654 aa2.15□□□□□ -2.06
LINC00243-201ENST00000399196 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
LINC00243-201ENST00000399196 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
LINC00243-201ENST00000399196 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.01□□□□□ -2.09
LINC00243-201ENST00000399196 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
LINC00243-201ENST00000399196 KRTAP4-4Q9BYR3 166 aa1.84□□□□□ -2.11
LINC00243-201ENST00000399196 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
LINC00243-201ENST00000399196 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
LINC00243-201ENST00000399196 PHGR1C9JFL3 82 aa1.56□□□□□ -2.16
LINC00243-201ENST00000399196 KRTAP21-1Q3LI58 79 aa1.56□□□□□ -2.16
LINC00243-201ENST00000399196 MUC16Q8WXI7 14507 aa1.03□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 4.8 ms