RNA–Protein interactions for RNA: ENST00000398842.7

CDH23-206, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 1,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-206ENST00000398842 KRTAP19-4Q3LI73 84 aa8.17□□□□□ -1.1
CDH23-206ENST00000398842 KRTAP5-9P26371 169 aa8.16□□□□□ -1.1
CDH23-206ENST00000398842 MUC12Q9UKN1 5478 aa8.11□□□□□ -1.11
CDH23-206ENST00000398842 LUZP6Q538Z0 58 aa8.1□□□□□ -1.11
CDH23-206ENST00000398842 NDUFAF8A1L188 74 aa8.05□□□□□ -1.12
CDH23-206ENST00000398842 KRTAP19-3Q7Z4W3 81 aa8.02□□□□□ -1.13
CDH23-206ENST00000398842 KRTAP4-7Q9BYR0 210 aa8.02□□□□□ -1.13
CDH23-206ENST00000398842 MDN1Q9NU22 5596 aa7.96□□□□□ -1.14
CDH23-206ENST00000398842 MT1GP13640 62 aa7.95□□□□□ -1.14
CDH23-206ENST00000398842 MT1MQ8N339 61 aa7.89□□□□□ -1.15
CDH23-206ENST00000398842 LCE5AQ5TCM9 118 aa7.88□□□□□ -1.15
CDH23-206ENST00000398842 SPRR2EP22531 72 aa7.87□□□□□ -1.15
CDH23-206ENST00000398842 SPRR2BP35325 72 aa7.87□□□□□ -1.15
CDH23-206ENST00000398842 SPRR2AP35326 72 aa7.87□□□□□ -1.15
CDH23-206ENST00000398842 LCE1AQ5T7P2 110 aa7.87□□□□□ -1.15
CDH23-206ENST00000398842 KRTAP9-6A8MVA2 160 aa7.82□□□□□ -1.16
CDH23-206ENST00000398842 H3BS24 57 aa7.78□□□□□ -1.16
CDH23-206ENST00000398842 KRTAP4-3Q9BYR4 195 aa7.76□□□□□ -1.17
CDH23-206ENST00000398842 NEBP20929 6669 aa7.68□□□□□ -1.18
CDH23-206ENST00000398842 SPRR2DP22532 72 aa7.59□□□□□ -1.2
CDH23-206ENST00000398842 LOC100996750A0A140TA64 210 aa7.53□□□□□ -1.2
CDH23-206ENST00000398842 DSTQ03001 7570 aaKnown RBP7.46□□□□□ -1.21
CDH23-206ENST00000398842 LCE3BQ5TA77 95 aa7.31□□□□□ -1.24
CDH23-206ENST00000398842 KRTAP2-3P0C7H8 128 aa7.26□□□□□ -1.25
CDH23-206ENST00000398842 KRTAP2-4Q9BYR9 128 aa7.26□□□□□ -1.25
CDH23-206ENST00000398842 KRTAP2-1Q9BYU5 128 aa7.26□□□□□ -1.25
CDH23-206ENST00000398842 KRTAP20-1Q3LI63 56 aa7.21□□□□□ -1.25
CDH23-206ENST00000398842 KRTAP5-5Q701N2 237 aaPredicted RBP7.12□□□□□ -1.27
CDH23-206ENST00000398842 A0A0A0MQY5 61 aa7.09□□□□□ -1.27
CDH23-206ENST00000398842 KRTAP2-2Q9BYT5 123 aa7.06□□□□□ -1.28
CDH23-206ENST00000398842 MT1AP04731 61 aa7□□□□□ -1.29
CDH23-206ENST00000398842 KRTAP6-1Q3LI64 71 aa6.95□□□□□ -1.3
CDH23-206ENST00000398842 KRTAP5-4Q6L8H1 288 aa6.74□□□□□ -1.33
CDH23-206ENST00000398842 SYNE1Q8NF91 8797 aaKnown RBP6.68□□□□□ -1.34
CDH23-206ENST00000398842 LCE4AQ5TA78 99 aa6.68□□□□□ -1.34
CDH23-206ENST00000398842 KRTAP4-9Q9BYQ8 210 aa6.67□□□□□ -1.34
CDH23-206ENST00000398842 MT4P47944 62 aa6.64□□□□□ -1.35
CDH23-206ENST00000398842 KRTAP9-4Q9BYQ2 154 aa6.64□□□□□ -1.35
CDH23-206ENST00000398842 INE1O15225 51 aa6.62□□□□□ -1.35
CDH23-206ENST00000398842 LCE1DQ5T752 114 aa6.55□□□□□ -1.36
CDH23-206ENST00000398842 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
CDH23-206ENST00000398842 KRTAP12-4P60329 112 aa6.52□□□□□ -1.37
CDH23-206ENST00000398842 HMCN1Q96RW7 5635 aa6.43□□□□□ -1.38
CDH23-206ENST00000398842 KRTAP6-2Q3LI66 62 aa6.36□□□□□ -1.39
CDH23-206ENST00000398842 KRTAP20-2Q3LI61 65 aa6.34□□□□□ -1.39
CDH23-206ENST00000398842 MT3P25713 68 aa6.31□□□□□ -1.4
CDH23-206ENST00000398842 LCE3DQ9BYE3 92 aa6.18□□□□□ -1.42
CDH23-206ENST00000398842 KRTAP5-2Q701N4 177 aa6.13□□□□□ -1.43
CDH23-206ENST00000398842 KRTAP5-3Q6L8H2 238 aa6.11□□□□□ -1.43
CDH23-206ENST00000398842 LCE3EQ5T5B0 92 aa6.02□□□□□ -1.45
CDH23-206ENST00000398842 AHNAK2Q8IVF2 5795 aa5.81□□□□□ -1.48
CDH23-206ENST00000398842 OBSCNQ5VST9 7968 aa5.8□□□□□ -1.48
CDH23-206ENST00000398842 KRTAP5-10Q6L8G5 202 aa5.6□□□□□ -1.51
CDH23-206ENST00000398842 KRTAP4-11Q9BYQ6 195 aa5.58□□□□□ -1.52
CDH23-206ENST00000398842 GPR98Q8WXG9 6306 aa5.51□□□□□ -1.53
CDH23-206ENST00000398842 LCE1EQ5T753 118 aa5.45□□□□□ -1.54
CDH23-206ENST00000398842 KRTAP5-8O75690 187 aa5.38□□□□□ -1.55
CDH23-206ENST00000398842 PRM1P04553 51 aa5.32□□□□□ -1.56
CDH23-206ENST00000398842 KRTAP5-1Q6L8H4 278 aa5.3□□□□□ -1.56
CDH23-206ENST00000398842 KRTAP5-7Q6L8G8 165 aa5.22□□□□□ -1.57
CDH23-206ENST00000398842 LCE1BQ5T7P3 118 aa5.12□□□□□ -1.59
CDH23-206ENST00000398842 MUC5ACP98088 5654 aa5.11□□□□□ -1.59
CDH23-206ENST00000398842 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
CDH23-206ENST00000398842 LCE1CQ5T751 118 aa5.09□□□□□ -1.59
CDH23-206ENST00000398842 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
CDH23-206ENST00000398842 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.79□□□□□ -1.64
CDH23-206ENST00000398842 MUC5BQ9HC84 5762 aaPredicted RBP4.7□□□□□ -1.66
CDH23-206ENST00000398842 KRTAP21-2Q3LI59 83 aa4.55□□□□□ -1.68
CDH23-206ENST00000398842 KRTAP5-11Q6L8G4 156 aa4.48□□□□□ -1.69
CDH23-206ENST00000398842 AHNAKQ09666 5890 aaKnown RBP4.44□□□□□ -1.7
CDH23-206ENST00000398842 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
CDH23-206ENST00000398842 LCE1FQ5T754 118 aa4.04□□□□□ -1.76
CDH23-206ENST00000398842 KRTAP4-4Q9BYR3 166 aa4.03□□□□□ -1.76
CDH23-206ENST00000398842 PHGR1C9JFL3 82 aa3.85□□□□□ -1.79
CDH23-206ENST00000398842 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
CDH23-206ENST00000398842 KRTAP21-1Q3LI58 79 aa3.29□□□□□ -1.88
CDH23-206ENST00000398842 MUC16Q8WXI7 14507 aa2.48□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 53 ms