RNA–Protein interactions for RNA: ENST00000398493.5

MBD1-208, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 5 BASIC

Gene MBD1, Length 1,845 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-208ENST00000398493 KRTAP5-9P26371 169 aa6.9□□□□□ -1.3
MBD1-208ENST00000398493 KRTAP19-5Q3LI72 72 aa6.83□□□□□ -1.32
MBD1-208ENST00000398493 SPRR2FQ96RM1 72 aa6.82□□□□□ -1.32
MBD1-208ENST00000398493 KRTAP20-1Q3LI63 56 aa6.69□□□□□ -1.34
MBD1-208ENST00000398493 KRTAP19-7Q3SYF9 63 aa6.69□□□□□ -1.34
MBD1-208ENST00000398493 A0A0A0MQY5 61 aa6.64□□□□□ -1.35
MBD1-208ENST00000398493 LCE1AQ5T7P2 110 aa6.6□□□□□ -1.35
MBD1-208ENST00000398493 MT1EP04732 61 aa6.59□□□□□ -1.35
MBD1-208ENST00000398493 SPRR2EP22531 72 aa6.59□□□□□ -1.35
MBD1-208ENST00000398493 SPRR2BP35325 72 aa6.59□□□□□ -1.35
MBD1-208ENST00000398493 SPRR2AP35326 72 aa6.59□□□□□ -1.35
MBD1-208ENST00000398493 KRTAP19-4Q3LI73 84 aa6.58□□□□□ -1.36
MBD1-208ENST00000398493 LCE3CQ5T5A8 94 aa6.56□□□□□ -1.36
MBD1-208ENST00000398493 KRTAP2-3P0C7H8 128 aa6.48□□□□□ -1.37
MBD1-208ENST00000398493 KRTAP2-4Q9BYR9 128 aa6.48□□□□□ -1.37
MBD1-208ENST00000398493 MT1LQ93083 61 aa6.43□□□□□ -1.38
MBD1-208ENST00000398493 KRTAP19-3Q7Z4W3 81 aa6.41□□□□□ -1.38
MBD1-208ENST00000398493 LCE5AQ5TCM9 118 aa6.38□□□□□ -1.39
MBD1-208ENST00000398493 SPRR2DP22532 72 aa6.35□□□□□ -1.39
MBD1-208ENST00000398493 MT1GP13640 62 aa6.29□□□□□ -1.4
MBD1-208ENST00000398493 DSTQ03001 7570 aaKnown RBP6.29□□□□□ -1.4
MBD1-208ENST00000398493 KRTAP2-2Q9BYT5 123 aa6.27□□□□□ -1.41
MBD1-208ENST00000398493 KRTAP2-1Q9BYU5 128 aa6.27□□□□□ -1.41
MBD1-208ENST00000398493 KRTAP4-7Q9BYR0 210 aa6.25□□□□□ -1.41
MBD1-208ENST00000398493 MT1MQ8N339 61 aa6.23□□□□□ -1.41
MBD1-208ENST00000398493 LCE3BQ5TA77 95 aa6.15□□□□□ -1.42
MBD1-208ENST00000398493 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.43
MBD1-208ENST00000398493 KRTAP9-6A8MVA2 160 aa6.14□□□□□ -1.43
MBD1-208ENST00000398493 INE1O15225 51 aa6.13□□□□□ -1.43
MBD1-208ENST00000398493 LOC100996750A0A140TA64 210 aa5.85□□□□□ -1.47
MBD1-208ENST00000398493 KRTAP4-9Q9BYQ8 210 aa5.76□□□□□ -1.49
MBD1-208ENST00000398493 KRTAP5-5Q701N2 237 aaPredicted RBP5.69□□□□□ -1.5
MBD1-208ENST00000398493 GPR98Q8WXG9 6306 aa5.68□□□□□ -1.5
MBD1-208ENST00000398493 KRTAP5-4Q6L8H1 288 aa5.65□□□□□ -1.5
MBD1-208ENST00000398493 LCE4AQ5TA78 99 aa5.62□□□□□ -1.51
MBD1-208ENST00000398493 HMCN1Q96RW7 5635 aa5.6□□□□□ -1.51
MBD1-208ENST00000398493 LCE1DQ5T752 114 aa5.58□□□□□ -1.52
MBD1-208ENST00000398493 SYNE1Q8NF91 8797 aaKnown RBP5.56□□□□□ -1.52
MBD1-208ENST00000398493 MT4P47944 62 aa5.56□□□□□ -1.52
MBD1-208ENST00000398493 KRTAP4-6Q9BYQ5 205 aa5.49□□□□□ -1.53
MBD1-208ENST00000398493 MT1AP04731 61 aa5.47□□□□□ -1.53
MBD1-208ENST00000398493 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
MBD1-208ENST00000398493 AHNAK2Q8IVF2 5795 aa5.35□□□□□ -1.55
MBD1-208ENST00000398493 KRTAP12-4P60329 112 aa5.34□□□□□ -1.55
MBD1-208ENST00000398493 KRTAP20-2Q3LI61 65 aa5.31□□□□□ -1.56
MBD1-208ENST00000398493 KRTAP5-10Q6L8G5 202 aa5.23□□□□□ -1.57
MBD1-208ENST00000398493 KRTAP9-4Q9BYQ2 154 aa5.19□□□□□ -1.58
MBD1-208ENST00000398493 KRTAP5-3Q6L8H2 238 aa5.15□□□□□ -1.59
MBD1-208ENST00000398493 KRTAP6-2Q3LI66 62 aa5.04□□□□□ -1.6
MBD1-208ENST00000398493 KRTAP5-7Q6L8G8 165 aa5.04□□□□□ -1.6
MBD1-208ENST00000398493 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
MBD1-208ENST00000398493 LCE3DQ9BYE3 92 aa5□□□□□ -1.61
MBD1-208ENST00000398493 MT3P25713 68 aa4.98□□□□□ -1.61
MBD1-208ENST00000398493 LCE3EQ5T5B0 92 aa4.9□□□□□ -1.62
MBD1-208ENST00000398493 OBSCNQ5VST9 7968 aa4.86□□□□□ -1.63
MBD1-208ENST00000398493 KRTAP4-11Q9BYQ6 195 aa4.72□□□□□ -1.65
MBD1-208ENST00000398493 KRTAP5-8O75690 187 aa4.57□□□□□ -1.68
MBD1-208ENST00000398493 MUC5ACP98088 5654 aa4.47□□□□□ -1.69
MBD1-208ENST00000398493 PRM1P04553 51 aa4.46□□□□□ -1.7
MBD1-208ENST00000398493 KRTAP5-1Q6L8H4 278 aa4.45□□□□□ -1.7
MBD1-208ENST00000398493 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
MBD1-208ENST00000398493 MUC5BQ9HC84 5762 aaPredicted RBP4.41□□□□□ -1.7
MBD1-208ENST00000398493 LCE1EQ5T753 118 aa4.37□□□□□ -1.71
MBD1-208ENST00000398493 KRTAP9-9Q9BYP9 154 aa4.34□□□□□ -1.71
MBD1-208ENST00000398493 KRTAP4-2Q9BYR5 136 aa4.15□□□□□ -1.75
MBD1-208ENST00000398493 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
MBD1-208ENST00000398493 LCE1CQ5T751 118 aa4.08□□□□□ -1.76
MBD1-208ENST00000398493 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.77□□□□□ -1.81
MBD1-208ENST00000398493 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
MBD1-208ENST00000398493 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
MBD1-208ENST00000398493 KRTAP21-2Q3LI59 83 aa3.55□□□□□ -1.84
MBD1-208ENST00000398493 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
MBD1-208ENST00000398493 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.89
MBD1-208ENST00000398493 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
MBD1-208ENST00000398493 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
MBD1-208ENST00000398493 KRTAP21-1Q3LI58 79 aa2.85□□□□□ -1.95
MBD1-208ENST00000398493 MUC16Q8WXI7 14507 aa2.03□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 75.2 ms