RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 KRTAP9-6A8MVA2 160 aa3.62□□□□□ -1.83
CPSF1P1-201ENST00000397477 MACF1Q9UPN3 7388 aaKnown RBP3.6□□□□□ -1.83
CPSF1P1-201ENST00000397477 MT1EP04732 61 aa3.59□□□□□ -1.83
CPSF1P1-201ENST00000397477 MT1LQ93083 61 aa3.59□□□□□ -1.83
CPSF1P1-201ENST00000397477 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
CPSF1P1-201ENST00000397477 SYNE1Q8NF91 8797 aaKnown RBP3.57□□□□□ -1.84
CPSF1P1-201ENST00000397477 LOC100996750A0A140TA64 210 aa3.55□□□□□ -1.84
CPSF1P1-201ENST00000397477 MT1GP13640 62 aa3.55□□□□□ -1.84
CPSF1P1-201ENST00000397477 SPRR2FQ96RM1 72 aa3.55□□□□□ -1.84
CPSF1P1-201ENST00000397477 LCE2DQ5TA82 110 aaPredicted RBP3.54□□□□□ -1.84
CPSF1P1-201ENST00000397477 KRTAP19-6Q3LI70 58 aa3.52□□□□□ -1.85
CPSF1P1-201ENST00000397477 KRTAP9-7A8MTY7 169 aa3.41□□□□□ -1.86
CPSF1P1-201ENST00000397477 KRTAP19-3Q7Z4W3 81 aa3.41□□□□□ -1.86
CPSF1P1-201ENST00000397477 MT1MQ8N339 61 aa3.39□□□□□ -1.87
CPSF1P1-201ENST00000397477 MDN1Q9NU22 5596 aa3.34□□□□□ -1.87
CPSF1P1-201ENST00000397477 LCE3BQ5TA77 95 aa3.33□□□□□ -1.88
CPSF1P1-201ENST00000397477 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.32□□□□□ -1.88
CPSF1P1-201ENST00000397477 KRTAP2-3P0C7H8 128 aa3.32□□□□□ -1.88
CPSF1P1-201ENST00000397477 KRTAP2-4Q9BYR9 128 aa3.32□□□□□ -1.88
CPSF1P1-201ENST00000397477 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
CPSF1P1-201ENST00000397477 KRTAP19-4Q3LI73 84 aa3.29□□□□□ -1.88
CPSF1P1-201ENST00000397477 KRTAP4-9Q9BYQ8 210 aa3.23□□□□□ -1.89
CPSF1P1-201ENST00000397477 SPRR2EP22531 72 aa3.22□□□□□ -1.89
CPSF1P1-201ENST00000397477 SPRR2BP35325 72 aa3.22□□□□□ -1.89
CPSF1P1-201ENST00000397477 SPRR2AP35326 72 aa3.22□□□□□ -1.89
CPSF1P1-201ENST00000397477 KRTAP12-4P60329 112 aa3.22□□□□□ -1.89
CPSF1P1-201ENST00000397477 LCE5AQ5TCM9 118 aa3.2□□□□□ -1.9
CPSF1P1-201ENST00000397477 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
CPSF1P1-201ENST00000397477 LCE1AQ5T7P2 110 aa3.09□□□□□ -1.92
CPSF1P1-201ENST00000397477 SPRR2DP22532 72 aa3.08□□□□□ -1.92
CPSF1P1-201ENST00000397477 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
CPSF1P1-201ENST00000397477 KRTAP20-1Q3LI63 56 aa3.02□□□□□ -1.93
CPSF1P1-201ENST00000397477 NEBP20929 6669 aa3.02□□□□□ -1.93
CPSF1P1-201ENST00000397477 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
CPSF1P1-201ENST00000397477 MT1AP04731 61 aa2.99□□□□□ -1.93
CPSF1P1-201ENST00000397477 LCE3EQ5T5B0 92 aa2.94□□□□□ -1.94
CPSF1P1-201ENST00000397477 KRTAP5-9P26371 169 aa2.92□□□□□ -1.94
CPSF1P1-201ENST00000397477 MT4P47944 62 aa2.9□□□□□ -1.95
CPSF1P1-201ENST00000397477 KRTAP6-2Q3LI66 62 aa2.85□□□□□ -1.95
CPSF1P1-201ENST00000397477 PRM1P04553 51 aa2.85□□□□□ -1.95
CPSF1P1-201ENST00000397477 KRTAP9-4Q9BYQ2 154 aa2.82□□□□□ -1.96
CPSF1P1-201ENST00000397477 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
CPSF1P1-201ENST00000397477 MT3P25713 68 aa2.78□□□□□ -1.96
CPSF1P1-201ENST00000397477 KRTAP2-2Q9BYT5 123 aa2.75□□□□□ -1.97
CPSF1P1-201ENST00000397477 GPR98Q8WXG9 6306 aa2.69□□□□□ -1.98
CPSF1P1-201ENST00000397477 KRTAP4-6Q9BYQ5 205 aa2.68□□□□□ -1.98
CPSF1P1-201ENST00000397477 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
CPSF1P1-201ENST00000397477 LCE1DQ5T752 114 aa2.57□□□□□ -2
CPSF1P1-201ENST00000397477 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
CPSF1P1-201ENST00000397477 LCE1EQ5T753 118 aa2.52□□□□□ -2.01
CPSF1P1-201ENST00000397477 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
CPSF1P1-201ENST00000397477 KRTAP20-2Q3LI61 65 aa2.49□□□□□ -2.01
CPSF1P1-201ENST00000397477 KRTAP5-4Q6L8H1 288 aa2.45□□□□□ -2.02
CPSF1P1-201ENST00000397477 LCE4AQ5TA78 99 aa2.45□□□□□ -2.02
CPSF1P1-201ENST00000397477 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.02
CPSF1P1-201ENST00000397477 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
CPSF1P1-201ENST00000397477 LCE1FQ5T754 118 aa2.37□□□□□ -2.03
CPSF1P1-201ENST00000397477 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
CPSF1P1-201ENST00000397477 MUC5BQ9HC84 5762 aaPredicted RBP2.25□□□□□ -2.05
CPSF1P1-201ENST00000397477 KRTAP5-3Q6L8H2 238 aa2.24□□□□□ -2.05
CPSF1P1-201ENST00000397477 KRTAP5-10Q6L8G5 202 aa2.22□□□□□ -2.05
CPSF1P1-201ENST00000397477 KRTAP4-11Q9BYQ6 195 aa2.21□□□□□ -2.06
CPSF1P1-201ENST00000397477 KRTAP5-7Q6L8G8 165 aa2.2□□□□□ -2.06
CPSF1P1-201ENST00000397477 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
CPSF1P1-201ENST00000397477 KRTAP4-2Q9BYR5 136 aa2.05□□□□□ -2.08
CPSF1P1-201ENST00000397477 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
CPSF1P1-201ENST00000397477 KRTAP4-12Q9BQ66 201 aa2.02□□□□□ -2.09
CPSF1P1-201ENST00000397477 AHNAKQ09666 5890 aaKnown RBP2.02□□□□□ -2.09
CPSF1P1-201ENST00000397477 KRTAP5-1Q6L8H4 278 aa2.01□□□□□ -2.09
CPSF1P1-201ENST00000397477 KRTAP9-9Q9BYP9 154 aa2□□□□□ -2.09
CPSF1P1-201ENST00000397477 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
CPSF1P1-201ENST00000397477 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
CPSF1P1-201ENST00000397477 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
CPSF1P1-201ENST00000397477 KRTAP5-11Q6L8G4 156 aa1.7□□□□□ -2.14
CPSF1P1-201ENST00000397477 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
CPSF1P1-201ENST00000397477 PHGR1C9JFL3 82 aa1.49□□□□□ -2.17
CPSF1P1-201ENST00000397477 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 80.5 ms