RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 KRTAP5-7Q6L8G8 165 aa4.12□□□□□ -1.75
SYNE4-203ENST00000397428 SERP1Q9Y6X1 66 aa4.1□□□□□ -1.75
SYNE4-203ENST00000397428 SEC61GP60059 68 aa4.09□□□□□ -1.75
SYNE4-203ENST00000397428 A0A1B0GU33 70 aa4.08□□□□□ -1.76
SYNE4-203ENST00000397428 KRTAP5-3Q6L8H2 238 aa4.08□□□□□ -1.76
SYNE4-203ENST00000397428 C10orf95Q9H7T3 257 aa4.07□□□□□ -1.76
SYNE4-203ENST00000397428 COA5Q86WW8 74 aa4.06□□□□□ -1.76
SYNE4-203ENST00000397428 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
SYNE4-203ENST00000397428 SERP2Q8N6R1 65 aa4.01□□□□□ -1.77
SYNE4-203ENST00000397428 KRTAP20-2Q3LI61 65 aa4□□□□□ -1.77
SYNE4-203ENST00000397428 KRTAP4-7Q9BYR0 210 aa4□□□□□ -1.77
SYNE4-203ENST00000397428 TNP1P09430 55 aa3.99□□□□□ -1.77
SYNE4-203ENST00000397428 SPRR5A0A1B0GTR4 108 aa3.97□□□□□ -1.77
SYNE4-203ENST00000397428 KRTAP5-5Q701N2 237 aaPredicted RBP3.95□□□□□ -1.78
SYNE4-203ENST00000397428 SMIM26A0A096LP01 95 aa3.94□□□□□ -1.78
SYNE4-203ENST00000397428 K7ERU9 68 aa3.94□□□□□ -1.78
SYNE4-203ENST00000397428 A8MU10 97 aa3.92□□□□□ -1.78
SYNE4-203ENST00000397428 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
SYNE4-203ENST00000397428 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
SYNE4-203ENST00000397428 A0A1B0GU69 56 aa3.86□□□□□ -1.79
SYNE4-203ENST00000397428 H7BZZ5 65 aa3.81□□□□□ -1.8
SYNE4-203ENST00000397428 PRAC1Q96KF2 57 aa3.8□□□□□ -1.8
SYNE4-203ENST00000397428 COX7CP15954 63 aa3.79□□□□□ -1.8
SYNE4-203ENST00000397428 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
SYNE4-203ENST00000397428 KRTAP4-11Q9BYQ6 195 aa3.73□□□□□ -1.81
SYNE4-203ENST00000397428 KRTAP5-2Q701N4 177 aa3.68□□□□□ -1.82
SYNE4-203ENST00000397428 PRR15LQ9BU68 103 aa3.65□□□□□ -1.83
SYNE4-203ENST00000397428 KRTAP25-1Q3LHN0 102 aa3.64□□□□□ -1.83
SYNE4-203ENST00000397428 KRTAP5-8O75690 187 aa3.61□□□□□ -1.83
SYNE4-203ENST00000397428 LCE3CQ5T5A8 94 aa3.6□□□□□ -1.83
SYNE4-203ENST00000397428 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
SYNE4-203ENST00000397428 LINC01558Q9Y6Z2 57 aa3.6□□□□□ -1.83
SYNE4-203ENST00000397428 MT1AP04731 61 aa3.58□□□□□ -1.84
SYNE4-203ENST00000397428 KRTAP6-1Q3LI64 71 aa3.58□□□□□ -1.84
SYNE4-203ENST00000397428 UQCR11O14957 56 aa3.55□□□□□ -1.84
SYNE4-203ENST00000397428 MUC5ACP98088 5654 aa3.53□□□□□ -1.84
SYNE4-203ENST00000397428 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
SYNE4-203ENST00000397428 NDUFAF8A1L188 74 aa3.51□□□□□ -1.85
SYNE4-203ENST00000397428 OBSCNQ5VST9 7968 aa3.5□□□□□ -1.85
SYNE4-203ENST00000397428 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
SYNE4-203ENST00000397428 ANAPC13Q9BS18 74 aa3.47□□□□□ -1.85
SYNE4-203ENST00000397428 ATP5EP56381 51 aaPredicted RBP3.46□□□□□ -1.86
SYNE4-203ENST00000397428 MIR22HGQ0VDD5 57 aa3.44□□□□□ -1.86
SYNE4-203ENST00000397428 CCDC179H3BU77 68 aa3.43□□□□□ -1.86
SYNE4-203ENST00000397428 MT3P25713 68 aa3.43□□□□□ -1.86
SYNE4-203ENST00000397428 MUC5BQ9HC84 5762 aaPredicted RBP3.43□□□□□ -1.86
SYNE4-203ENST00000397428 KRTAP9-6A8MVA2 160 aa3.41□□□□□ -1.86
SYNE4-203ENST00000397428 K7ERS5 55 aa3.4□□□□□ -1.87
SYNE4-203ENST00000397428 KRTAP5-1Q6L8H4 278 aa3.34□□□□□ -1.87
SYNE4-203ENST00000397428 TMEM258P61165 79 aa3.27□□□□□ -1.89
SYNE4-203ENST00000397428 Q1T7F1 81 aa3.24□□□□□ -1.89
SYNE4-203ENST00000397428 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
SYNE4-203ENST00000397428 PSPHP1O15172 72 aa3.2□□□□□ -1.9
SYNE4-203ENST00000397428 CDC42SE1Q9NRR8 79 aa3.18□□□□□ -1.9
SYNE4-203ENST00000397428 V9GYY9 64 aa3.18□□□□□ -1.9
SYNE4-203ENST00000397428 ROMO1P60602 79 aa3.14□□□□□ -1.91
SYNE4-203ENST00000397428 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
SYNE4-203ENST00000397428 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
SYNE4-203ENST00000397428 A6NED7 52 aa3.06□□□□□ -1.92
SYNE4-203ENST00000397428 LCE1BQ5T7P3 118 aa2.9□□□□□ -1.95
SYNE4-203ENST00000397428 LCE1CQ5T751 118 aa2.89□□□□□ -1.95
SYNE4-203ENST00000397428 PRO0628Q9UI54 55 aa2.85□□□□□ -1.95
SYNE4-203ENST00000397428 BRK1Q8WUW1 75 aa2.71□□□□□ -1.98
SYNE4-203ENST00000397428 PMAIP1Q13794 54 aa2.67□□□□□ -1.98
SYNE4-203ENST00000397428 KRTAP5-11Q6L8G4 156 aa2.64□□□□□ -1.99
SYNE4-203ENST00000397428 LUZP6Q538Z0 58 aa2.63□□□□□ -1.99
SYNE4-203ENST00000397428 LCE3EQ5T5B0 92 aa2.63□□□□□ -1.99
SYNE4-203ENST00000397428 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.61□□□□□ -1.99
SYNE4-203ENST00000397428 KTN1-AS1Q86SY8 53 aa2.6□□□□□ -1.99
SYNE4-203ENST00000397428 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
SYNE4-203ENST00000397428 PHGR1C9JFL3 82 aa2.45□□□□□ -2.02
SYNE4-203ENST00000397428 KRTAP21-2Q3LI59 83 aa2.38□□□□□ -2.03
SYNE4-203ENST00000397428 KRTAP4-4Q9BYR3 166 aa2.19□□□□□ -2.06
SYNE4-203ENST00000397428 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
SYNE4-203ENST00000397428 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
SYNE4-203ENST00000397428 INE1O15225 51 aa1.77□□□□□ -2.13
SYNE4-203ENST00000397428 PRM1P04553 51 aa1.58□□□□□ -2.16
SYNE4-203ENST00000397428 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 55.9 ms