RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 KRTAP19-3Q7Z4W3 81 aa6.75□□□□□ -1.33
TSPAN4-204ENST00000397404 MT1GP13640 62 aa6.73□□□□□ -1.33
TSPAN4-204ENST00000397404 MUC12Q9UKN1 5478 aa6.67□□□□□ -1.34
TSPAN4-204ENST00000397404 LCE3CQ5T5A8 94 aa6.66□□□□□ -1.34
TSPAN4-204ENST00000397404 LCE5AQ5TCM9 118 aa6.64□□□□□ -1.35
TSPAN4-204ENST00000397404 LCE1AQ5T7P2 110 aa6.61□□□□□ -1.35
TSPAN4-204ENST00000397404 SPRR2EP22531 72 aa6.59□□□□□ -1.36
TSPAN4-204ENST00000397404 SPRR2BP35325 72 aa6.59□□□□□ -1.36
TSPAN4-204ENST00000397404 SPRR2AP35326 72 aa6.59□□□□□ -1.36
TSPAN4-204ENST00000397404 MDN1Q9NU22 5596 aa6.58□□□□□ -1.36
TSPAN4-204ENST00000397404 SPRR5A0A1B0GTR4 108 aa6.54□□□□□ -1.36
TSPAN4-204ENST00000397404 MT1MQ8N339 61 aa6.54□□□□□ -1.36
TSPAN4-204ENST00000397404 SPRR2DP22532 72 aa6.37□□□□□ -1.39
TSPAN4-204ENST00000397404 KRTAP4-7Q9BYR0 210 aa6.36□□□□□ -1.39
TSPAN4-204ENST00000397404 LUZP6Q538Z0 58 aa6.35□□□□□ -1.39
TSPAN4-204ENST00000397404 NEBP20929 6669 aa6.35□□□□□ -1.39
TSPAN4-204ENST00000397404 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
TSPAN4-204ENST00000397404 KRTAP9-6A8MVA2 160 aa6.14□□□□□ -1.43
TSPAN4-204ENST00000397404 LCE3BQ5TA77 95 aa6.13□□□□□ -1.43
TSPAN4-204ENST00000397404 DSTQ03001 7570 aaKnown RBP6.1□□□□□ -1.43
TSPAN4-204ENST00000397404 KRTAP2-3P0C7H8 128 aa6.08□□□□□ -1.44
TSPAN4-204ENST00000397404 KRTAP2-4Q9BYR9 128 aa6.08□□□□□ -1.44
TSPAN4-204ENST00000397404 KRTAP20-1Q3LI63 56 aa6.05□□□□□ -1.44
TSPAN4-204ENST00000397404 LOC100996750A0A140TA64 210 aa5.99□□□□□ -1.45
TSPAN4-204ENST00000397404 KRTAP5-5Q701N2 237 aaPredicted RBP5.94□□□□□ -1.46
TSPAN4-204ENST00000397404 KRTAP2-2Q9BYT5 123 aa5.94□□□□□ -1.46
TSPAN4-204ENST00000397404 KRTAP2-1Q9BYU5 128 aa5.94□□□□□ -1.46
TSPAN4-204ENST00000397404 NDUFAF8A1L188 74 aa5.9□□□□□ -1.47
TSPAN4-204ENST00000397404 MT1AP04731 61 aa5.82□□□□□ -1.48
TSPAN4-204ENST00000397404 KRTAP5-4Q6L8H1 288 aa5.77□□□□□ -1.49
TSPAN4-204ENST00000397404 LCE4AQ5TA78 99 aa5.77□□□□□ -1.49
TSPAN4-204ENST00000397404 KRTAP6-1Q3LI64 71 aa5.65□□□□□ -1.5
TSPAN4-204ENST00000397404 KRTAP12-4P60329 112 aa5.64□□□□□ -1.51
TSPAN4-204ENST00000397404 H3BS24 57 aa5.62□□□□□ -1.51
TSPAN4-204ENST00000397404 KRTAP9-4Q9BYQ2 154 aa5.52□□□□□ -1.53
TSPAN4-204ENST00000397404 SYNE1Q8NF91 8797 aaKnown RBP5.52□□□□□ -1.53
TSPAN4-204ENST00000397404 MT4P47944 62 aa5.44□□□□□ -1.54
TSPAN4-204ENST00000397404 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
TSPAN4-204ENST00000397404 KRTAP4-6Q9BYQ5 205 aa5.37□□□□□ -1.55
TSPAN4-204ENST00000397404 KRTAP4-9Q9BYQ8 210 aa5.37□□□□□ -1.55
TSPAN4-204ENST00000397404 KRTAP20-2Q3LI61 65 aa5.36□□□□□ -1.55
TSPAN4-204ENST00000397404 HMCN1Q96RW7 5635 aa5.35□□□□□ -1.55
TSPAN4-204ENST00000397404 A0A0A0MQY5 61 aa5.33□□□□□ -1.56
TSPAN4-204ENST00000397404 MT3P25713 68 aa5.32□□□□□ -1.56
TSPAN4-204ENST00000397404 KRTAP6-2Q3LI66 62 aa5.25□□□□□ -1.57
TSPAN4-204ENST00000397404 KRTAP5-2Q701N4 177 aa5.21□□□□□ -1.58
TSPAN4-204ENST00000397404 KRTAP5-3Q6L8H2 238 aa5.17□□□□□ -1.58
TSPAN4-204ENST00000397404 INE1O15225 51 aa5.07□□□□□ -1.6
TSPAN4-204ENST00000397404 LCE3DQ9BYE3 92 aa5□□□□□ -1.61
TSPAN4-204ENST00000397404 GPR98Q8WXG9 6306 aa4.98□□□□□ -1.61
TSPAN4-204ENST00000397404 LCE3EQ5T5B0 92 aa4.86□□□□□ -1.63
TSPAN4-204ENST00000397404 AHNAK2Q8IVF2 5795 aa4.83□□□□□ -1.64
TSPAN4-204ENST00000397404 LCE1EQ5T753 118 aa4.72□□□□□ -1.65
TSPAN4-204ENST00000397404 KRTAP5-10Q6L8G5 202 aa4.72□□□□□ -1.65
TSPAN4-204ENST00000397404 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
TSPAN4-204ENST00000397404 OBSCNQ5VST9 7968 aa4.67□□□□□ -1.66
TSPAN4-204ENST00000397404 KRTAP5-7Q6L8G8 165 aa4.5□□□□□ -1.69
TSPAN4-204ENST00000397404 KRTAP5-8O75690 187 aa4.49□□□□□ -1.69
TSPAN4-204ENST00000397404 KRTAP5-1Q6L8H4 278 aa4.49□□□□□ -1.69
TSPAN4-204ENST00000397404 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
TSPAN4-204ENST00000397404 LCE1CQ5T751 118 aa4.36□□□□□ -1.71
TSPAN4-204ENST00000397404 LCE1BQ5T7P3 118 aa4.36□□□□□ -1.71
TSPAN4-204ENST00000397404 KRTAP4-2Q9BYR5 136 aa4.26□□□□□ -1.73
TSPAN4-204ENST00000397404 KRTAP9-9Q9BYP9 154 aa4.17□□□□□ -1.74
TSPAN4-204ENST00000397404 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
TSPAN4-204ENST00000397404 PRM1P04553 51 aa4.07□□□□□ -1.76
TSPAN4-204ENST00000397404 MUC5BQ9HC84 5762 aaPredicted RBP3.96□□□□□ -1.77
TSPAN4-204ENST00000397404 AHNAKQ09666 5890 aaKnown RBP3.9□□□□□ -1.79
TSPAN4-204ENST00000397404 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
TSPAN4-204ENST00000397404 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
TSPAN4-204ENST00000397404 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
TSPAN4-204ENST00000397404 KRTAP4-12Q9BQ66 201 aa3.45□□□□□ -1.86
TSPAN4-204ENST00000397404 PHGR1C9JFL3 82 aa3.28□□□□□ -1.88
TSPAN4-204ENST00000397404 KRTAP4-4Q9BYR3 166 aa3.18□□□□□ -1.9
TSPAN4-204ENST00000397404 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
TSPAN4-204ENST00000397404 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
TSPAN4-204ENST00000397404 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 42 ms