RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
SEC13-204ENST00000397099 V9GYY9 64 aa4.99□□□□□ -1.61
SEC13-204ENST00000397099 K7ERS5 55 aa4.95□□□□□ -1.62
SEC13-204ENST00000397099 MIR22HGQ0VDD5 57 aa4.95□□□□□ -1.62
SEC13-204ENST00000397099 MT1LQ93083 61 aa4.95□□□□□ -1.62
SEC13-204ENST00000397099 GPR98Q8WXG9 6306 aa4.95□□□□□ -1.62
SEC13-204ENST00000397099 Q1T7F1 81 aa4.94□□□□□ -1.62
SEC13-204ENST00000397099 MT1MQ8N339 61 aa4.93□□□□□ -1.62
SEC13-204ENST00000397099 KRTAP25-1Q3LHN0 102 aa4.88□□□□□ -1.63
SEC13-204ENST00000397099 LCE1DQ5T752 114 aa4.87□□□□□ -1.63
SEC13-204ENST00000397099 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
SEC13-204ENST00000397099 MT4P47944 62 aa4.83□□□□□ -1.64
SEC13-204ENST00000397099 LCE4AQ5TA78 99 aa4.83□□□□□ -1.64
SEC13-204ENST00000397099 PSPHP1O15172 72 aa4.81□□□□□ -1.64
SEC13-204ENST00000397099 KRTAP4-3Q9BYR4 195 aa4.79□□□□□ -1.64
SEC13-204ENST00000397099 HMCN1Q96RW7 5635 aa4.76□□□□□ -1.65
SEC13-204ENST00000397099 KRTAP19-4Q3LI73 84 aa4.76□□□□□ -1.65
SEC13-204ENST00000397099 KRTAP23-1A1A580 65 aa4.75□□□□□ -1.65
SEC13-204ENST00000397099 A6NED7 52 aa4.71□□□□□ -1.66
SEC13-204ENST00000397099 KRTAP5-4Q6L8H1 288 aa4.7□□□□□ -1.66
SEC13-204ENST00000397099 KRTAP4-6Q9BYQ5 205 aa4.64□□□□□ -1.67
SEC13-204ENST00000397099 KRTAP4-7Q9BYR0 210 aa4.63□□□□□ -1.67
SEC13-204ENST00000397099 CDC42SE1Q9NRR8 79 aa4.63□□□□□ -1.67
SEC13-204ENST00000397099 AHNAK2Q8IVF2 5795 aa4.59□□□□□ -1.68
SEC13-204ENST00000397099 KRTAP15-1Q3LI76 137 aa4.56□□□□□ -1.68
SEC13-204ENST00000397099 KRTAP5-10Q6L8G5 202 aa4.55□□□□□ -1.68
SEC13-204ENST00000397099 ROMO1P60602 79 aa4.53□□□□□ -1.68
SEC13-204ENST00000397099 KRTAP5-5Q701N2 237 aaPredicted RBP4.53□□□□□ -1.68
SEC13-204ENST00000397099 KRTAP12-4P60329 112 aa4.48□□□□□ -1.69
SEC13-204ENST00000397099 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
SEC13-204ENST00000397099 LCE3CQ5T5A8 94 aa4.47□□□□□ -1.69
SEC13-204ENST00000397099 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
SEC13-204ENST00000397099 BRK1Q8WUW1 75 aa4.45□□□□□ -1.7
SEC13-204ENST00000397099 KRTAP5-3Q6L8H2 238 aa4.43□□□□□ -1.7
SEC13-204ENST00000397099 LOC100996750A0A140TA64 210 aa4.4□□□□□ -1.71
SEC13-204ENST00000397099 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
SEC13-204ENST00000397099 SYNE1Q8NF91 8797 aaKnown RBP4.36□□□□□ -1.71
SEC13-204ENST00000397099 PRO0628Q9UI54 55 aa4.31□□□□□ -1.72
SEC13-204ENST00000397099 MT1AP04731 61 aa4.24□□□□□ -1.73
SEC13-204ENST00000397099 PMAIP1Q13794 54 aa4.22□□□□□ -1.73
SEC13-204ENST00000397099 KRTAP6-1Q3LI64 71 aa4.16□□□□□ -1.74
SEC13-204ENST00000397099 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
SEC13-204ENST00000397099 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
SEC13-204ENST00000397099 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
SEC13-204ENST00000397099 KRTAP4-11Q9BYQ6 195 aa4.1□□□□□ -1.75
SEC13-204ENST00000397099 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
SEC13-204ENST00000397099 KRTAP6-2Q3LI66 62 aa3.98□□□□□ -1.77
SEC13-204ENST00000397099 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
SEC13-204ENST00000397099 MT3P25713 68 aa3.91□□□□□ -1.78
SEC13-204ENST00000397099 PRAC1Q96KF2 57 aa3.91□□□□□ -1.78
SEC13-204ENST00000397099 OBSCNQ5VST9 7968 aa3.87□□□□□ -1.79
SEC13-204ENST00000397099 KRTAP9-9Q9BYP9 154 aa3.81□□□□□ -1.8
SEC13-204ENST00000397099 MUC5ACP98088 5654 aa3.79□□□□□ -1.8
SEC13-204ENST00000397099 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
SEC13-204ENST00000397099 AHNAKQ09666 5890 aaKnown RBP3.76□□□□□ -1.81
SEC13-204ENST00000397099 KRTAP5-1Q6L8H4 278 aa3.69□□□□□ -1.82
SEC13-204ENST00000397099 H3BS24 57 aa3.65□□□□□ -1.83
SEC13-204ENST00000397099 LCE1EQ5T753 118 aa3.62□□□□□ -1.83
SEC13-204ENST00000397099 A0A0A0MQY5 61 aa3.46□□□□□ -1.86
SEC13-204ENST00000397099 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
SEC13-204ENST00000397099 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
SEC13-204ENST00000397099 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
SEC13-204ENST00000397099 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
SEC13-204ENST00000397099 LCE3DQ9BYE3 92 aa3.26□□□□□ -1.89
SEC13-204ENST00000397099 KRTAP4-12Q9BQ66 201 aa3.09□□□□□ -1.91
SEC13-204ENST00000397099 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
SEC13-204ENST00000397099 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.05□□□□□ -1.92
SEC13-204ENST00000397099 NDUFAF8A1L188 74 aa3.02□□□□□ -1.93
SEC13-204ENST00000397099 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
SEC13-204ENST00000397099 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
SEC13-204ENST00000397099 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
SEC13-204ENST00000397099 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
SEC13-204ENST00000397099 INE1O15225 51 aa2.59□□□□□ -1.99
SEC13-204ENST00000397099 KRTAP4-4Q9BYR3 166 aa2.54□□□□□ -2
SEC13-204ENST00000397099 MUC19Q7Z5P9 8384 aa2.38□□□□□ -2.03
SEC13-204ENST00000397099 PRM1P04553 51 aa2.27□□□□□ -2.05
SEC13-204ENST00000397099 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
SEC13-204ENST00000397099 MUC16Q8WXI7 14507 aa1.74□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 182.8 ms