RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 KRTAP19-5Q3LI72 72 aa5.49□□□□□ -1.53
TM9SF1-202ENST00000396854 SPRR2FQ96RM1 72 aa5.49□□□□□ -1.53
TM9SF1-202ENST00000396854 MT1EP04732 61 aa5.43□□□□□ -1.54
TM9SF1-202ENST00000396854 MUC12Q9UKN1 5478 aa5.33□□□□□ -1.56
TM9SF1-202ENST00000396854 LCE1AQ5T7P2 110 aa5.3□□□□□ -1.56
TM9SF1-202ENST00000396854 SPRR2EP22531 72 aa5.27□□□□□ -1.57
TM9SF1-202ENST00000396854 SPRR2BP35325 72 aa5.27□□□□□ -1.57
TM9SF1-202ENST00000396854 SPRR2AP35326 72 aa5.27□□□□□ -1.57
TM9SF1-202ENST00000396854 MT1LQ93083 61 aa5.27□□□□□ -1.57
TM9SF1-202ENST00000396854 KRTAP19-3Q7Z4W3 81 aa5.27□□□□□ -1.57
TM9SF1-202ENST00000396854 MDN1Q9NU22 5596 aa5.23□□□□□ -1.57
TM9SF1-202ENST00000396854 LCE3CQ5T5A8 94 aa5.23□□□□□ -1.57
TM9SF1-202ENST00000396854 LCE5AQ5TCM9 118 aa5.22□□□□□ -1.57
TM9SF1-202ENST00000396854 MT1GP13640 62 aa5.2□□□□□ -1.58
TM9SF1-202ENST00000396854 INE1O15225 51 aa5.17□□□□□ -1.58
TM9SF1-202ENST00000396854 KRTAP19-4Q3LI73 84 aa5.17□□□□□ -1.58
TM9SF1-202ENST00000396854 NEBP20929 6669 aa5.15□□□□□ -1.59
TM9SF1-202ENST00000396854 MT1MQ8N339 61 aa5.12□□□□□ -1.59
TM9SF1-202ENST00000396854 SPRR2DP22532 72 aa5.09□□□□□ -1.59
TM9SF1-202ENST00000396854 KRTAP4-7Q9BYR0 210 aa5.03□□□□□ -1.6
TM9SF1-202ENST00000396854 KRTAP9-6A8MVA2 160 aa5.02□□□□□ -1.61
TM9SF1-202ENST00000396854 KRTAP4-3Q9BYR4 195 aa4.97□□□□□ -1.61
TM9SF1-202ENST00000396854 LCE3BQ5TA77 95 aa4.92□□□□□ -1.62
TM9SF1-202ENST00000396854 KRTAP2-3P0C7H8 128 aa4.9□□□□□ -1.62
TM9SF1-202ENST00000396854 KRTAP2-4Q9BYR9 128 aa4.9□□□□□ -1.62
TM9SF1-202ENST00000396854 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
TM9SF1-202ENST00000396854 KRTAP2-1Q9BYU5 128 aa4.88□□□□□ -1.63
TM9SF1-202ENST00000396854 DSTQ03001 7570 aaKnown RBP4.87□□□□□ -1.63
TM9SF1-202ENST00000396854 KRTAP2-2Q9BYT5 123 aa4.79□□□□□ -1.64
TM9SF1-202ENST00000396854 LOC100996750A0A140TA64 210 aa4.74□□□□□ -1.65
TM9SF1-202ENST00000396854 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
TM9SF1-202ENST00000396854 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
TM9SF1-202ENST00000396854 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
TM9SF1-202ENST00000396854 MT1AP04731 61 aa4.49□□□□□ -1.69
TM9SF1-202ENST00000396854 KRTAP6-1Q3LI64 71 aa4.44□□□□□ -1.7
TM9SF1-202ENST00000396854 KRTAP4-9Q9BYQ8 210 aa4.42□□□□□ -1.7
TM9SF1-202ENST00000396854 MT4P47944 62 aa4.4□□□□□ -1.71
TM9SF1-202ENST00000396854 LCE1DQ5T752 114 aa4.4□□□□□ -1.71
TM9SF1-202ENST00000396854 SYNE1Q8NF91 8797 aaKnown RBP4.39□□□□□ -1.71
TM9SF1-202ENST00000396854 KRTAP12-4P60329 112 aa4.37□□□□□ -1.71
TM9SF1-202ENST00000396854 KRTAP4-6Q9BYQ5 205 aa4.36□□□□□ -1.71
TM9SF1-202ENST00000396854 KRTAP9-4Q9BYQ2 154 aa4.28□□□□□ -1.72
TM9SF1-202ENST00000396854 KRTAP20-2Q3LI61 65 aa4.28□□□□□ -1.72
TM9SF1-202ENST00000396854 HMCN1Q96RW7 5635 aa4.28□□□□□ -1.72
TM9SF1-202ENST00000396854 KRTAP5-3Q6L8H2 238 aa4.14□□□□□ -1.75
TM9SF1-202ENST00000396854 KRTAP6-2Q3LI66 62 aa4.12□□□□□ -1.75
TM9SF1-202ENST00000396854 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
TM9SF1-202ENST00000396854 MT3P25713 68 aa4.07□□□□□ -1.76
TM9SF1-202ENST00000396854 LCE3DQ9BYE3 92 aa4.02□□□□□ -1.77
TM9SF1-202ENST00000396854 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
TM9SF1-202ENST00000396854 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.79
TM9SF1-202ENST00000396854 KRTAP5-10Q6L8G5 202 aa3.82□□□□□ -1.8
TM9SF1-202ENST00000396854 PRM1P04553 51 aa3.77□□□□□ -1.81
TM9SF1-202ENST00000396854 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
TM9SF1-202ENST00000396854 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
TM9SF1-202ENST00000396854 GPR98Q8WXG9 6306 aa3.67□□□□□ -1.82
TM9SF1-202ENST00000396854 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
TM9SF1-202ENST00000396854 LCE1EQ5T753 118 aa3.63□□□□□ -1.83
TM9SF1-202ENST00000396854 KRTAP5-7Q6L8G8 165 aa3.59□□□□□ -1.83
TM9SF1-202ENST00000396854 KRTAP5-1Q6L8H4 278 aa3.59□□□□□ -1.83
TM9SF1-202ENST00000396854 MUC5ACP98088 5654 aa3.4□□□□□ -1.87
TM9SF1-202ENST00000396854 KRTAP4-2Q9BYR5 136 aa3.38□□□□□ -1.87
TM9SF1-202ENST00000396854 LCE1CQ5T751 118 aa3.37□□□□□ -1.87
TM9SF1-202ENST00000396854 LCE1BQ5T7P3 118 aa3.37□□□□□ -1.87
TM9SF1-202ENST00000396854 KRTAP9-9Q9BYP9 154 aa3.33□□□□□ -1.88
TM9SF1-202ENST00000396854 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
TM9SF1-202ENST00000396854 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
TM9SF1-202ENST00000396854 MUC5BQ9HC84 5762 aaPredicted RBP3.13□□□□□ -1.91
TM9SF1-202ENST00000396854 KRTAP5-11Q6L8G4 156 aa3.01□□□□□ -1.93
TM9SF1-202ENST00000396854 AHNAKQ09666 5890 aaKnown RBP2.98□□□□□ -1.93
TM9SF1-202ENST00000396854 KRTAP21-2Q3LI59 83 aa2.93□□□□□ -1.94
TM9SF1-202ENST00000396854 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
TM9SF1-202ENST00000396854 PHGR1C9JFL3 82 aa2.57□□□□□ -2
TM9SF1-202ENST00000396854 KRTAP4-4Q9BYR3 166 aa2.57□□□□□ -2
TM9SF1-202ENST00000396854 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
TM9SF1-202ENST00000396854 MUC19Q7Z5P9 8384 aa2.23□□□□□ -2.05
TM9SF1-202ENST00000396854 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 44.2 ms