RNA–Protein interactions for RNA: ENST00000396634.5

HLA-A-204, Transcript of major histocompatibility complex, class I, A, humanhuman

APPRIS P1 BASIC

Gene HLA-A, Length 1,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-204ENST00000396634 MDN1Q9NU22 5596 aa6.55□□□□□ -1.36
HLA-A-204ENST00000396634 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
HLA-A-204ENST00000396634 KRTAP19-7Q3SYF9 63 aa6.45□□□□□ -1.38
HLA-A-204ENST00000396634 SPRR2EP22531 72 aa6.43□□□□□ -1.38
HLA-A-204ENST00000396634 SPRR2BP35325 72 aa6.43□□□□□ -1.38
HLA-A-204ENST00000396634 SPRR2AP35326 72 aa6.43□□□□□ -1.38
HLA-A-204ENST00000396634 KRTAP19-5Q3LI72 72 aa6.43□□□□□ -1.38
HLA-A-204ENST00000396634 NEBP20929 6669 aa6.4□□□□□ -1.38
HLA-A-204ENST00000396634 LCE1AQ5T7P2 110 aa6.4□□□□□ -1.39
HLA-A-204ENST00000396634 MT1EP04732 61 aa6.36□□□□□ -1.39
HLA-A-204ENST00000396634 KRTAP12-3P60328 96 aa6.2□□□□□ -1.42
HLA-A-204ENST00000396634 SPRR2DP22532 72 aa6.19□□□□□ -1.42
HLA-A-204ENST00000396634 KRTAP19-3Q7Z4W3 81 aa6.19□□□□□ -1.42
HLA-A-204ENST00000396634 MT1LQ93083 61 aa6.15□□□□□ -1.42
HLA-A-204ENST00000396634 LCE5AQ5TCM9 118 aa6.15□□□□□ -1.43
HLA-A-204ENST00000396634 KRTAP20-1Q3LI63 56 aa6.11□□□□□ -1.43
HLA-A-204ENST00000396634 MT1GP13640 62 aa6.05□□□□□ -1.44
HLA-A-204ENST00000396634 MT1MQ8N339 61 aa6.02□□□□□ -1.44
HLA-A-204ENST00000396634 KRTAP2-3P0C7H8 128 aa6.02□□□□□ -1.45
HLA-A-204ENST00000396634 KRTAP2-4Q9BYR9 128 aa6.02□□□□□ -1.45
HLA-A-204ENST00000396634 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
HLA-A-204ENST00000396634 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
HLA-A-204ENST00000396634 KRTAP4-3Q9BYR4 195 aa5.99□□□□□ -1.45
HLA-A-204ENST00000396634 DSTQ03001 7570 aaKnown RBP5.98□□□□□ -1.45
HLA-A-204ENST00000396634 KRTAP2-2Q9BYT5 123 aa5.85□□□□□ -1.47
HLA-A-204ENST00000396634 KRTAP2-1Q9BYU5 128 aa5.85□□□□□ -1.47
HLA-A-204ENST00000396634 LCE3CQ5T5A8 94 aa5.75□□□□□ -1.49
HLA-A-204ENST00000396634 LOC100996750A0A140TA64 210 aa5.66□□□□□ -1.5
HLA-A-204ENST00000396634 KRTAP19-4Q3LI73 84 aa5.64□□□□□ -1.51
HLA-A-204ENST00000396634 KRTAP4-9Q9BYQ8 210 aa5.55□□□□□ -1.52
HLA-A-204ENST00000396634 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
HLA-A-204ENST00000396634 KRTAP5-5Q701N2 237 aaPredicted RBP5.46□□□□□ -1.54
HLA-A-204ENST00000396634 MT4P47944 62 aa5.45□□□□□ -1.54
HLA-A-204ENST00000396634 KRTAP5-4Q6L8H1 288 aa5.43□□□□□ -1.54
HLA-A-204ENST00000396634 LCE1DQ5T752 114 aa5.42□□□□□ -1.54
HLA-A-204ENST00000396634 LCE4AQ5TA78 99 aa5.41□□□□□ -1.54
HLA-A-204ENST00000396634 KRTAP4-6Q9BYQ5 205 aa5.34□□□□□ -1.55
HLA-A-204ENST00000396634 HMCN1Q96RW7 5635 aa5.34□□□□□ -1.55
HLA-A-204ENST00000396634 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
HLA-A-204ENST00000396634 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.57
HLA-A-204ENST00000396634 MT1AP04731 61 aa5.2□□□□□ -1.58
HLA-A-204ENST00000396634 KRTAP12-4P60329 112 aa5.16□□□□□ -1.58
HLA-A-204ENST00000396634 KRTAP20-2Q3LI61 65 aa5.14□□□□□ -1.59
HLA-A-204ENST00000396634 GPR98Q8WXG9 6306 aa5.09□□□□□ -1.6
HLA-A-204ENST00000396634 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
HLA-A-204ENST00000396634 KRTAP5-3Q6L8H2 238 aa4.96□□□□□ -1.61
HLA-A-204ENST00000396634 AHNAK2Q8IVF2 5795 aa4.93□□□□□ -1.62
HLA-A-204ENST00000396634 KRTAP6-2Q3LI66 62 aa4.9□□□□□ -1.62
HLA-A-204ENST00000396634 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
HLA-A-204ENST00000396634 KRTAP5-10Q6L8G5 202 aa4.77□□□□□ -1.65
HLA-A-204ENST00000396634 MT3P25713 68 aa4.71□□□□□ -1.66
HLA-A-204ENST00000396634 OBSCNQ5VST9 7968 aa4.65□□□□□ -1.67
HLA-A-204ENST00000396634 KRTAP4-11Q9BYQ6 195 aa4.58□□□□□ -1.68
HLA-A-204ENST00000396634 LCE3EQ5T5B0 92 aa4.49□□□□□ -1.69
HLA-A-204ENST00000396634 KRTAP5-7Q6L8G8 165 aa4.47□□□□□ -1.69
HLA-A-204ENST00000396634 LCE3DQ9BYE3 92 aa4.47□□□□□ -1.69
HLA-A-204ENST00000396634 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
HLA-A-204ENST00000396634 PRM1P04553 51 aa4.41□□□□□ -1.7
HLA-A-204ENST00000396634 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
HLA-A-204ENST00000396634 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
HLA-A-204ENST00000396634 KRTAP5-1Q6L8H4 278 aa4.29□□□□□ -1.72
HLA-A-204ENST00000396634 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
HLA-A-204ENST00000396634 MUC5ACP98088 5654 aa4.15□□□□□ -1.74
HLA-A-204ENST00000396634 LCE1BQ5T7P3 118 aa4.05□□□□□ -1.76
HLA-A-204ENST00000396634 KRTAP4-2Q9BYR5 136 aa4.03□□□□□ -1.76
HLA-A-204ENST00000396634 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
HLA-A-204ENST00000396634 LCE1CQ5T751 118 aa3.9□□□□□ -1.78
HLA-A-204ENST00000396634 AHNAKQ09666 5890 aaKnown RBP3.89□□□□□ -1.79
HLA-A-204ENST00000396634 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
HLA-A-204ENST00000396634 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
HLA-A-204ENST00000396634 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
HLA-A-204ENST00000396634 LCE1FQ5T754 118 aa3.23□□□□□ -1.89
HLA-A-204ENST00000396634 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
HLA-A-204ENST00000396634 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
HLA-A-204ENST00000396634 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
HLA-A-204ENST00000396634 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
HLA-A-204ENST00000396634 MUC16Q8WXI7 14507 aa1.92□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 12.2 ms