RNA–Protein interactions for RNA: ENST00000396364.7

FXN-202, Transcript of frataxin, humanhuman

TSL 5 BASIC

Gene FXN, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-202ENST00000396364 SPRR2DP22532 72 aa7.69□□□□□ -1.18
FXN-202ENST00000396364 PMAIP1Q13794 54 aa7.68□□□□□ -1.18
FXN-202ENST00000396364 MT1GP13640 62 aa7.63□□□□□ -1.19
FXN-202ENST00000396364 LCE5AQ5TCM9 118 aa7.62□□□□□ -1.19
FXN-202ENST00000396364 MT1LQ93083 61 aa7.6□□□□□ -1.19
FXN-202ENST00000396364 PRO0628Q9UI54 55 aa7.6□□□□□ -1.19
FXN-202ENST00000396364 KRTAP20-1Q3LI63 56 aa7.59□□□□□ -1.19
FXN-202ENST00000396364 KRTAP2-3P0C7H8 128 aa7.55□□□□□ -1.2
FXN-202ENST00000396364 KRTAP2-4Q9BYR9 128 aa7.55□□□□□ -1.2
FXN-202ENST00000396364 KRTAP19-4Q3LI73 84 aa7.47□□□□□ -1.21
FXN-202ENST00000396364 KRTAP15-1Q3LI76 137 aa7.45□□□□□ -1.22
FXN-202ENST00000396364 MT1MQ8N339 61 aa7.44□□□□□ -1.22
FXN-202ENST00000396364 LCE3BQ5TA77 95 aa7.42□□□□□ -1.22
FXN-202ENST00000396364 KRTAP2-2Q9BYT5 123 aa7.35□□□□□ -1.23
FXN-202ENST00000396364 KRTAP2-1Q9BYU5 128 aa7.35□□□□□ -1.23
FXN-202ENST00000396364 DSTQ03001 7570 aaKnown RBP7.25□□□□□ -1.25
FXN-202ENST00000396364 LCE3CQ5T5A8 94 aa7.19□□□□□ -1.26
FXN-202ENST00000396364 KRTAP4-7Q9BYR0 210 aa7.18□□□□□ -1.26
FXN-202ENST00000396364 KRTAP4-3Q9BYR4 195 aa7.17□□□□□ -1.26
FXN-202ENST00000396364 KTN1-AS1Q86SY8 53 aa7.14□□□□□ -1.27
FXN-202ENST00000396364 PRAC1Q96KF2 57 aa7.14□□□□□ -1.27
FXN-202ENST00000396364 LCE4AQ5TA78 99 aa6.86□□□□□ -1.31
FXN-202ENST00000396364 SVIPQ8NHG7 77 aa6.81□□□□□ -1.32
FXN-202ENST00000396364 LOC100996750A0A140TA64 210 aa6.79□□□□□ -1.32
FXN-202ENST00000396364 KRTAP5-4Q6L8H1 288 aa6.75□□□□□ -1.33
FXN-202ENST00000396364 KRTAP5-5Q701N2 237 aaPredicted RBP6.74□□□□□ -1.33
FXN-202ENST00000396364 KRTAP4-9Q9BYQ8 210 aa6.68□□□□□ -1.34
FXN-202ENST00000396364 KRTAP9-6A8MVA2 160 aa6.65□□□□□ -1.34
FXN-202ENST00000396364 MT4P47944 62 aa6.65□□□□□ -1.34
FXN-202ENST00000396364 LCE1DQ5T752 114 aa6.63□□□□□ -1.35
FXN-202ENST00000396364 KRTAP12-4P60329 112 aa6.55□□□□□ -1.36
FXN-202ENST00000396364 MT1AP04731 61 aa6.51□□□□□ -1.37
FXN-202ENST00000396364 SPRR5A0A1B0GTR4 108 aa6.48□□□□□ -1.37
FXN-202ENST00000396364 KRTAP4-6Q9BYQ5 205 aa6.46□□□□□ -1.38
FXN-202ENST00000396364 HMCN1Q96RW7 5635 aa6.44□□□□□ -1.38
FXN-202ENST00000396364 KRTAP6-1Q3LI64 71 aa6.38□□□□□ -1.39
FXN-202ENST00000396364 SYNE1Q8NF91 8797 aaKnown RBP6.38□□□□□ -1.39
FXN-202ENST00000396364 KRTAP20-2Q3LI61 65 aa6.35□□□□□ -1.39
FXN-202ENST00000396364 GPR98Q8WXG9 6306 aa6.33□□□□□ -1.4
FXN-202ENST00000396364 KRTAP9-4Q9BYQ2 154 aa6.22□□□□□ -1.41
FXN-202ENST00000396364 LUZP6Q538Z0 58 aa6.15□□□□□ -1.42
FXN-202ENST00000396364 KRTAP5-3Q6L8H2 238 aa6.11□□□□□ -1.43
FXN-202ENST00000396364 KRTAP6-2Q3LI66 62 aa6.01□□□□□ -1.45
FXN-202ENST00000396364 KRTAP5-2Q701N4 177 aa6.01□□□□□ -1.45
FXN-202ENST00000396364 AHNAK2Q8IVF2 5795 aa5.98□□□□□ -1.45
FXN-202ENST00000396364 MT3P25713 68 aa5.97□□□□□ -1.45
FXN-202ENST00000396364 KRTAP5-10Q6L8G5 202 aa5.85□□□□□ -1.47
FXN-202ENST00000396364 KRTAP4-11Q9BYQ6 195 aa5.67□□□□□ -1.5
FXN-202ENST00000396364 KRTAP5-7Q6L8G8 165 aa5.6□□□□□ -1.51
FXN-202ENST00000396364 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
FXN-202ENST00000396364 KRTAP5-8O75690 187 aa5.44□□□□□ -1.54
FXN-202ENST00000396364 NDUFAF8A1L188 74 aa5.38□□□□□ -1.55
FXN-202ENST00000396364 LCE1EQ5T753 118 aa5.34□□□□□ -1.55
FXN-202ENST00000396364 LCE3DQ9BYE3 92 aa5.33□□□□□ -1.56
FXN-202ENST00000396364 KRTAP5-1Q6L8H4 278 aa5.27□□□□□ -1.57
FXN-202ENST00000396364 KRTAP9-9Q9BYP9 154 aa5.14□□□□□ -1.59
FXN-202ENST00000396364 LCE3EQ5T5B0 92 aa5.11□□□□□ -1.59
FXN-202ENST00000396364 MUC5ACP98088 5654 aa5.07□□□□□ -1.6
FXN-202ENST00000396364 LCE1BQ5T7P3 118 aa4.96□□□□□ -1.62
FXN-202ENST00000396364 LCE1CQ5T751 118 aa4.94□□□□□ -1.62
FXN-202ENST00000396364 AHNAKQ09666 5890 aaKnown RBP4.94□□□□□ -1.62
FXN-202ENST00000396364 MUC5BQ9HC84 5762 aaPredicted RBP4.93□□□□□ -1.62
FXN-202ENST00000396364 KRTAP4-2Q9BYR5 136 aa4.9□□□□□ -1.63
FXN-202ENST00000396364 A0A0A0MQY5 61 aa4.69□□□□□ -1.66
FXN-202ENST00000396364 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.55□□□□□ -1.68
FXN-202ENST00000396364 INE1O15225 51 aa4.52□□□□□ -1.69
FXN-202ENST00000396364 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
FXN-202ENST00000396364 KRTAP4-12Q9BQ66 201 aa4.29□□□□□ -1.72
FXN-202ENST00000396364 H3BS24 57 aa4.23□□□□□ -1.73
FXN-202ENST00000396364 LCE1FQ5T754 118 aa4.21□□□□□ -1.74
FXN-202ENST00000396364 KRTAP21-2Q3LI59 83 aa4.19□□□□□ -1.74
FXN-202ENST00000396364 PRM1P04553 51 aa4.12□□□□□ -1.75
FXN-202ENST00000396364 PHGR1C9JFL3 82 aa3.78□□□□□ -1.8
FXN-202ENST00000396364 KRTAP4-4Q9BYR3 166 aa3.73□□□□□ -1.81
FXN-202ENST00000396364 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
FXN-202ENST00000396364 KRTAP21-1Q3LI58 79 aa2.62□□□□□ -1.99
FXN-202ENST00000396364 MUC16Q8WXI7 14507 aa2.41□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 68.7 ms