RNA–Protein interactions for RNA: ENST00000396222.6

LDHA-204, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 1,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-204ENST00000396222 MT3P25713 68 aa3.35□□□□□ -1.87
LDHA-204ENST00000396222 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
LDHA-204ENST00000396222 KRTAP19-8Q3LI54 63 aa3.28□□□□□ -1.89
LDHA-204ENST00000396222 KRTAP5-2Q701N4 177 aa3.26□□□□□ -1.89
LDHA-204ENST00000396222 PP632Q6XCG6 107 aa3.23□□□□□ -1.89
LDHA-204ENST00000396222 PRO2289Q9P1D8 64 aa3.22□□□□□ -1.89
LDHA-204ENST00000396222 TNP1P09430 55 aa3.2□□□□□ -1.9
LDHA-204ENST00000396222 MT1BP07438 61 aa3.18□□□□□ -1.9
LDHA-204ENST00000396222 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
LDHA-204ENST00000396222 SYNE2Q8WXH0 6885 aaKnown RBP3.13□□□□□ -1.91
LDHA-204ENST00000396222 KRTAP2-2Q9BYT5 123 aa3.12□□□□□ -1.91
LDHA-204ENST00000396222 KRTAP10-5P60370 271 aa3.1□□□□□ -1.91
LDHA-204ENST00000396222 MT1XP80297 61 aa3.1□□□□□ -1.91
LDHA-204ENST00000396222 KRTAP20-1Q3LI63 56 aa3.07□□□□□ -1.92
LDHA-204ENST00000396222 MACF1Q9UPN3 7388 aaKnown RBP3.06□□□□□ -1.92
LDHA-204ENST00000396222 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
LDHA-204ENST00000396222 NEBP20929 6669 aa3.05□□□□□ -1.92
LDHA-204ENST00000396222 FCGBPQ9Y6R7 5405 aaPredicted RBP3.04□□□□□ -1.92
LDHA-204ENST00000396222 USH2AO75445 5202 aa3.03□□□□□ -1.92
LDHA-204ENST00000396222 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
LDHA-204ENST00000396222 LCE3CQ5T5A8 94 aa3.02□□□□□ -1.93
LDHA-204ENST00000396222 KRTAP19-6Q3LI70 58 aa3.01□□□□□ -1.93
LDHA-204ENST00000396222 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
LDHA-204ENST00000396222 LCE3AQ5TA76 89 aa2.96□□□□□ -1.94
LDHA-204ENST00000396222 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
LDHA-204ENST00000396222 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
LDHA-204ENST00000396222 OBSCNQ5VST9 7968 aa2.93□□□□□ -1.94
LDHA-204ENST00000396222 KRTAP8-1Q8IUC2 63 aa2.93□□□□□ -1.94
LDHA-204ENST00000396222 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
LDHA-204ENST00000396222 HMCN1Q96RW7 5635 aa2.93□□□□□ -1.94
LDHA-204ENST00000396222 KRTAP12-3P60328 96 aa2.89□□□□□ -1.95
LDHA-204ENST00000396222 INE1O15225 51 aa2.86□□□□□ -1.95
LDHA-204ENST00000396222 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
LDHA-204ENST00000396222 MUC12Q9UKN1 5478 aa2.84□□□□□ -1.95
LDHA-204ENST00000396222 KMT2DO14686 5537 aa2.82□□□□□ -1.96
LDHA-204ENST00000396222 KRTAP19-5Q3LI72 72 aa2.81□□□□□ -1.96
LDHA-204ENST00000396222 KRTAP2-3P0C7H8 128 aa2.79□□□□□ -1.96
LDHA-204ENST00000396222 KRTAP2-4Q9BYR9 128 aa2.79□□□□□ -1.96
LDHA-204ENST00000396222 LCE3EQ5T5B0 92 aa2.77□□□□□ -1.97
LDHA-204ENST00000396222 KRTAP19-7Q3SYF9 63 aa2.75□□□□□ -1.97
LDHA-204ENST00000396222 MT1EP04732 61 aa2.72□□□□□ -1.97
LDHA-204ENST00000396222 SPRR2FQ96RM1 72 aa2.69□□□□□ -1.98
LDHA-204ENST00000396222 MT1LQ93083 61 aa2.68□□□□□ -1.98
LDHA-204ENST00000396222 KRTAP2-1Q9BYU5 128 aa2.67□□□□□ -1.98
LDHA-204ENST00000396222 MDN1Q9NU22 5596 aa2.67□□□□□ -1.98
LDHA-204ENST00000396222 MT1GP13640 62 aa2.65□□□□□ -1.99
LDHA-204ENST00000396222 KRTAP19-3Q7Z4W3 81 aa2.64□□□□□ -1.99
LDHA-204ENST00000396222 MT1MQ8N339 61 aa2.56□□□□□ -2
LDHA-204ENST00000396222 SPRR2EP22531 72 aa2.55□□□□□ -2
LDHA-204ENST00000396222 SPRR2BP35325 72 aa2.55□□□□□ -2
LDHA-204ENST00000396222 SPRR2AP35326 72 aa2.55□□□□□ -2
LDHA-204ENST00000396222 KRTAP9-6A8MVA2 160 aa2.54□□□□□ -2
LDHA-204ENST00000396222 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
LDHA-204ENST00000396222 LCE3DQ9BYE3 92 aa2.49□□□□□ -2.01
LDHA-204ENST00000396222 SPRR2DP22532 72 aa2.46□□□□□ -2.02
LDHA-204ENST00000396222 DSTQ03001 7570 aaKnown RBP2.4□□□□□ -2.03
LDHA-204ENST00000396222 KRTAP5-10Q6L8G5 202 aa2.36□□□□□ -2.03
LDHA-204ENST00000396222 KRTAP5-7Q6L8G8 165 aa2.36□□□□□ -2.03
LDHA-204ENST00000396222 MT1AP04731 61 aa2.3□□□□□ -2.04
LDHA-204ENST00000396222 KRTAP5-5Q701N2 237 aaPredicted RBP2.29□□□□□ -2.04
LDHA-204ENST00000396222 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
LDHA-204ENST00000396222 KRTAP6-1Q3LI64 71 aa2.23□□□□□ -2.05
LDHA-204ENST00000396222 KRTAP12-4P60329 112 aa2.23□□□□□ -2.05
LDHA-204ENST00000396222 MT4P47944 62 aa2.21□□□□□ -2.06
LDHA-204ENST00000396222 MUC5BQ9HC84 5762 aaPredicted RBP2.16□□□□□ -2.06
LDHA-204ENST00000396222 MUC5ACP98088 5654 aa2.09□□□□□ -2.07
LDHA-204ENST00000396222 SYNE1Q8NF91 8797 aaKnown RBP2.07□□□□□ -2.08
LDHA-204ENST00000396222 KRTAP20-2Q3LI61 65 aa2.06□□□□□ -2.08
LDHA-204ENST00000396222 KRTAP6-2Q3LI66 62 aa2.06□□□□□ -2.08
LDHA-204ENST00000396222 PRM1P04553 51 aa1.9□□□□□ -2.11
LDHA-204ENST00000396222 LCE1CQ5T751 118 aa1.74□□□□□ -2.13
LDHA-204ENST00000396222 LCE1BQ5T7P3 118 aa1.74□□□□□ -2.13
LDHA-204ENST00000396222 MUC19Q7Z5P9 8384 aa1.56□□□□□ -2.16
LDHA-204ENST00000396222 PHGR1C9JFL3 82 aa1.46□□□□□ -2.18
LDHA-204ENST00000396222 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
LDHA-204ENST00000396222 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
LDHA-204ENST00000396222 MUC16Q8WXI7 14507 aa0.82□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 29.9 ms