RNA–Protein interactions for RNA: ENST00000395794.2

CXCL12-205, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 1,052 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-205ENST00000395794 MT1EP04732 61 aa5.11□□□□□ -1.59
CXCL12-205ENST00000395794 KRTAP5-11Q6L8G4 156 aa5.1□□□□□ -1.59
CXCL12-205ENST00000395794 KRTAP19-3Q7Z4W3 81 aa5.08□□□□□ -1.6
CXCL12-205ENST00000395794 PRR15LQ9BU68 103 aa5.08□□□□□ -1.6
CXCL12-205ENST00000395794 A8MU10 97 aa5.06□□□□□ -1.6
CXCL12-205ENST00000395794 ATP5EP56381 51 aaPredicted RBP5.06□□□□□ -1.6
CXCL12-205ENST00000395794 DSTQ03001 7570 aaKnown RBP5.05□□□□□ -1.6
CXCL12-205ENST00000395794 CCDC179H3BU77 68 aa5.04□□□□□ -1.6
CXCL12-205ENST00000395794 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
CXCL12-205ENST00000395794 TNP1P09430 55 aa4.99□□□□□ -1.61
CXCL12-205ENST00000395794 PP632Q6XCG6 107 aa4.99□□□□□ -1.61
CXCL12-205ENST00000395794 MT1GP13640 62 aa4.98□□□□□ -1.61
CXCL12-205ENST00000395794 LINC01558Q9Y6Z2 57 aa4.94□□□□□ -1.62
CXCL12-205ENST00000395794 C10orf95Q9H7T3 257 aa4.93□□□□□ -1.62
CXCL12-205ENST00000395794 LCE3AQ5TA76 89 aa4.9□□□□□ -1.63
CXCL12-205ENST00000395794 TMEM258P61165 79 aa4.89□□□□□ -1.63
CXCL12-205ENST00000395794 GPR98Q8WXG9 6306 aa4.88□□□□□ -1.63
CXCL12-205ENST00000395794 UQCR11O14957 56 aa4.87□□□□□ -1.63
CXCL12-205ENST00000395794 MT1MQ8N339 61 aa4.87□□□□□ -1.63
CXCL12-205ENST00000395794 MT1LQ93083 61 aa4.87□□□□□ -1.63
CXCL12-205ENST00000395794 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
CXCL12-205ENST00000395794 KRTAP12-3P60328 96 aa4.75□□□□□ -1.65
CXCL12-205ENST00000395794 MIR22HGQ0VDD5 57 aa4.75□□□□□ -1.65
CXCL12-205ENST00000395794 K7ERS5 55 aa4.74□□□□□ -1.65
CXCL12-205ENST00000395794 KRTAP4-3Q9BYR4 195 aa4.73□□□□□ -1.65
CXCL12-205ENST00000395794 MT4P47944 62 aa4.72□□□□□ -1.65
CXCL12-205ENST00000395794 HMCN1Q96RW7 5635 aa4.72□□□□□ -1.65
CXCL12-205ENST00000395794 KRTAP25-1Q3LHN0 102 aa4.69□□□□□ -1.66
CXCL12-205ENST00000395794 V9GYY9 64 aa4.69□□□□□ -1.66
CXCL12-205ENST00000395794 PRAC1Q96KF2 57 aa4.65□□□□□ -1.67
CXCL12-205ENST00000395794 PSPHP1O15172 72 aa4.63□□□□□ -1.67
CXCL12-205ENST00000395794 KRTAP5-4Q6L8H1 288 aa4.63□□□□□ -1.67
CXCL12-205ENST00000395794 Q1T7F1 81 aa4.59□□□□□ -1.67
CXCL12-205ENST00000395794 AHNAK2Q8IVF2 5795 aa4.56□□□□□ -1.68
CXCL12-205ENST00000395794 KRTAP5-1Q6L8H4 278 aa4.56□□□□□ -1.68
CXCL12-205ENST00000395794 A6NED7 52 aa4.5□□□□□ -1.69
CXCL12-205ENST00000395794 CDC42SE1Q9NRR8 79 aa4.44□□□□□ -1.7
CXCL12-205ENST00000395794 KRTAP5-5Q701N2 237 aaPredicted RBP4.43□□□□□ -1.7
CXCL12-205ENST00000395794 KRTAP12-4P60329 112 aa4.42□□□□□ -1.7
CXCL12-205ENST00000395794 KRTAP5-10Q6L8G5 202 aa4.4□□□□□ -1.71
CXCL12-205ENST00000395794 SPRR5A0A1B0GTR4 108 aa4.39□□□□□ -1.71
CXCL12-205ENST00000395794 KRTAP20-2Q3LI61 65 aa4.39□□□□□ -1.71
CXCL12-205ENST00000395794 KRTAP4-4Q9BYR3 166 aa4.38□□□□□ -1.71
CXCL12-205ENST00000395794 MT3P25713 68 aa4.36□□□□□ -1.71
CXCL12-205ENST00000395794 LCE3CQ5T5A8 94 aa4.36□□□□□ -1.71
CXCL12-205ENST00000395794 ROMO1P60602 79 aa4.35□□□□□ -1.71
CXCL12-205ENST00000395794 RPS28P62857 69 aaKnown RBP4.32□□□□□ -1.72
CXCL12-205ENST00000395794 SYNE1Q8NF91 8797 aaKnown RBP4.29□□□□□ -1.72
CXCL12-205ENST00000395794 KRTAP5-7Q6L8G8 165 aa4.26□□□□□ -1.73
CXCL12-205ENST00000395794 MT1AP04731 61 aa4.16□□□□□ -1.74
CXCL12-205ENST00000395794 KRTAP9-6A8MVA2 160 aa4.12□□□□□ -1.75
CXCL12-205ENST00000395794 KRTAP6-1Q3LI64 71 aa4.12□□□□□ -1.75
CXCL12-205ENST00000395794 PRO0628Q9UI54 55 aa4.07□□□□□ -1.76
CXCL12-205ENST00000395794 KRTAP5-2Q701N4 177 aa4.05□□□□□ -1.76
CXCL12-205ENST00000395794 NDUFAF8A1L188 74 aa3.97□□□□□ -1.77
CXCL12-205ENST00000395794 KRTAP6-2Q3LI66 62 aa3.96□□□□□ -1.78
CXCL12-205ENST00000395794 PMAIP1Q13794 54 aa3.92□□□□□ -1.78
CXCL12-205ENST00000395794 OBSCNQ5VST9 7968 aa3.89□□□□□ -1.79
CXCL12-205ENST00000395794 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
CXCL12-205ENST00000395794 AHNAKQ09666 5890 aaKnown RBP3.82□□□□□ -1.8
CXCL12-205ENST00000395794 BRK1Q8WUW1 75 aa3.81□□□□□ -1.8
CXCL12-205ENST00000395794 LUZP6Q538Z0 58 aa3.79□□□□□ -1.8
CXCL12-205ENST00000395794 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
CXCL12-205ENST00000395794 MUC5ACP98088 5654 aa3.75□□□□□ -1.81
CXCL12-205ENST00000395794 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
CXCL12-205ENST00000395794 KTN1-AS1Q86SY8 53 aa3.53□□□□□ -1.84
CXCL12-205ENST00000395794 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
CXCL12-205ENST00000395794 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
CXCL12-205ENST00000395794 LCE3EQ5T5B0 92 aa3.17□□□□□ -1.9
CXCL12-205ENST00000395794 LCE3DQ9BYE3 92 aa3.16□□□□□ -1.9
CXCL12-205ENST00000395794 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
CXCL12-205ENST00000395794 PHGR1C9JFL3 82 aa2.6□□□□□ -1.99
CXCL12-205ENST00000395794 INE1O15225 51 aa2.59□□□□□ -1.99
CXCL12-205ENST00000395794 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
CXCL12-205ENST00000395794 PRM1P04553 51 aa2.2□□□□□ -2.06
CXCL12-205ENST00000395794 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
CXCL12-205ENST00000395794 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 116.5 ms