RNA–Protein interactions for RNA: ENST00000395453.2

SCAF11-203, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCAF11, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-203ENST00000395453 MT3P25713 68 aa4.97□□□□□ -1.61
SCAF11-203ENST00000395453 COX7CP15954 63 aa4.97□□□□□ -1.61
SCAF11-203ENST00000395453 KRTAP12-1P59990 96 aa4.97□□□□□ -1.61
SCAF11-203ENST00000395453 SPINT4Q6UDR6 99 aa4.95□□□□□ -1.62
SCAF11-203ENST00000395453 H7BZZ5 65 aa4.94□□□□□ -1.62
SCAF11-203ENST00000395453 KRTAP19-5Q3LI72 72 aa4.92□□□□□ -1.62
SCAF11-203ENST00000395453 CYSTM1Q9H1C7 97 aa4.92□□□□□ -1.62
SCAF11-203ENST00000395453 MT1GP13640 62 aa4.9□□□□□ -1.63
SCAF11-203ENST00000395453 KRTAP5-7Q6L8G8 165 aa4.89□□□□□ -1.63
SCAF11-203ENST00000395453 KRTAP5-4Q6L8H1 288 aa4.88□□□□□ -1.63
SCAF11-203ENST00000395453 SMIM26A0A096LP01 95 aa4.83□□□□□ -1.64
SCAF11-203ENST00000395453 PP632Q6XCG6 107 aa4.83□□□□□ -1.64
SCAF11-203ENST00000395453 A0A1B0GU69 56 aa4.82□□□□□ -1.64
SCAF11-203ENST00000395453 KRTAP4-4Q9BYR3 166 aa4.81□□□□□ -1.64
SCAF11-203ENST00000395453 MT1MQ8N339 61 aa4.8□□□□□ -1.64
SCAF11-203ENST00000395453 MT1LQ93083 61 aa4.8□□□□□ -1.64
SCAF11-203ENST00000395453 A8MU10 97 aa4.79□□□□□ -1.64
SCAF11-203ENST00000395453 LCE3AQ5TA76 89 aa4.75□□□□□ -1.65
SCAF11-203ENST00000395453 C10orf95Q9H7T3 257 aa4.75□□□□□ -1.65
SCAF11-203ENST00000395453 TNP1P09430 55 aa4.72□□□□□ -1.65
SCAF11-203ENST00000395453 SPRR5A0A1B0GTR4 108 aa4.72□□□□□ -1.65
SCAF11-203ENST00000395453 ANAPC13Q9BS18 74 aa4.7□□□□□ -1.66
SCAF11-203ENST00000395453 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
SCAF11-203ENST00000395453 KRTAP9-6A8MVA2 160 aa4.66□□□□□ -1.66
SCAF11-203ENST00000395453 PRR15LQ9BU68 103 aa4.64□□□□□ -1.67
SCAF11-203ENST00000395453 CCDC179H3BU77 68 aa4.63□□□□□ -1.67
SCAF11-203ENST00000395453 ATP5EP56381 51 aaPredicted RBP4.61□□□□□ -1.67
SCAF11-203ENST00000395453 LINC01558Q9Y6Z2 57 aa4.61□□□□□ -1.67
SCAF11-203ENST00000395453 KRTAP12-3P60328 96 aa4.57□□□□□ -1.68
SCAF11-203ENST00000395453 KRTAP20-2Q3LI61 65 aa4.56□□□□□ -1.68
SCAF11-203ENST00000395453 SVIPQ8NHG7 77 aa4.54□□□□□ -1.68
SCAF11-203ENST00000395453 UQCR11O14957 56 aa4.5□□□□□ -1.69
SCAF11-203ENST00000395453 KRTAP5-5Q701N2 237 aaPredicted RBP4.45□□□□□ -1.7
SCAF11-203ENST00000395453 TMEM258P61165 79 aa4.44□□□□□ -1.7
SCAF11-203ENST00000395453 KRTAP25-1Q3LHN0 102 aa4.43□□□□□ -1.7
SCAF11-203ENST00000395453 KRTAP12-4P60329 112 aa4.41□□□□□ -1.7
SCAF11-203ENST00000395453 MIR22HGQ0VDD5 57 aa4.38□□□□□ -1.71
SCAF11-203ENST00000395453 OBSCNQ5VST9 7968 aa4.36□□□□□ -1.71
SCAF11-203ENST00000395453 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
SCAF11-203ENST00000395453 AHNAKQ09666 5890 aaKnown RBP4.31□□□□□ -1.72
SCAF11-203ENST00000395453 K7ERS5 55 aa4.29□□□□□ -1.72
SCAF11-203ENST00000395453 LCE1FQ5T754 118 aa4.28□□□□□ -1.72
SCAF11-203ENST00000395453 MUC5ACP98088 5654 aa4.27□□□□□ -1.73
SCAF11-203ENST00000395453 V9GYY9 64 aa4.23□□□□□ -1.73
SCAF11-203ENST00000395453 PSPHP1O15172 72 aa4.22□□□□□ -1.73
SCAF11-203ENST00000395453 Q1T7F1 81 aa4.22□□□□□ -1.73
SCAF11-203ENST00000395453 MUC5BQ9HC84 5762 aaPredicted RBP4.22□□□□□ -1.73
SCAF11-203ENST00000395453 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.73
SCAF11-203ENST00000395453 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
SCAF11-203ENST00000395453 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
SCAF11-203ENST00000395453 MT1AP04731 61 aa4.08□□□□□ -1.76
SCAF11-203ENST00000395453 KRTAP6-1Q3LI64 71 aa4.07□□□□□ -1.76
SCAF11-203ENST00000395453 A6NED7 52 aa4.06□□□□□ -1.76
SCAF11-203ENST00000395453 CDC42SE1Q9NRR8 79 aa4.06□□□□□ -1.76
SCAF11-203ENST00000395453 PCP4P48539 62 aa4.01□□□□□ -1.77
SCAF11-203ENST00000395453 ROMO1P60602 79 aa4.01□□□□□ -1.77
SCAF11-203ENST00000395453 RPS28P62857 69 aaKnown RBP3.97□□□□□ -1.77
SCAF11-203ENST00000395453 KRTAP6-2Q3LI66 62 aa3.9□□□□□ -1.79
SCAF11-203ENST00000395453 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
SCAF11-203ENST00000395453 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
SCAF11-203ENST00000395453 LCE1CQ5T751 118 aa3.51□□□□□ -1.85
SCAF11-203ENST00000395453 LCE1BQ5T7P3 118 aa3.51□□□□□ -1.85
SCAF11-203ENST00000395453 NDUFAF8A1L188 74 aa3.36□□□□□ -1.87
SCAF11-203ENST00000395453 BRK1Q8WUW1 75 aa3.33□□□□□ -1.88
SCAF11-203ENST00000395453 PRAC1Q96KF2 57 aa3.2□□□□□ -1.9
SCAF11-203ENST00000395453 PMAIP1Q13794 54 aa3.14□□□□□ -1.91
SCAF11-203ENST00000395453 PRO0628Q9UI54 55 aa3.02□□□□□ -1.93
SCAF11-203ENST00000395453 LCE3DQ9BYE3 92 aa3.01□□□□□ -1.93
SCAF11-203ENST00000395453 PHGR1C9JFL3 82 aa2.94□□□□□ -1.94
SCAF11-203ENST00000395453 MUC19Q7Z5P9 8384 aa2.94□□□□□ -1.94
SCAF11-203ENST00000395453 KTN1-AS1Q86SY8 53 aa2.83□□□□□ -1.96
SCAF11-203ENST00000395453 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
SCAF11-203ENST00000395453 LUZP6Q538Z0 58 aa2.59□□□□□ -2
SCAF11-203ENST00000395453 KRTAP21-1Q3LI58 79 aa2.26□□□□□ -2.05
SCAF11-203ENST00000395453 PRM1P04553 51 aa2.03□□□□□ -2.08
SCAF11-203ENST00000395453 INE1O15225 51 aa1.83□□□□□ -2.12
SCAF11-203ENST00000395453 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 75.4 ms