RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 NEBP20929 6669 aa6.93□□□□□ -1.3
LMNB1-202ENST00000395354 SPRR2EP22531 72 aa6.93□□□□□ -1.3
LMNB1-202ENST00000395354 SPRR2BP35325 72 aa6.93□□□□□ -1.3
LMNB1-202ENST00000395354 SPRR2AP35326 72 aa6.93□□□□□ -1.3
LMNB1-202ENST00000395354 KRTAP19-4Q3LI73 84 aa6.93□□□□□ -1.3
LMNB1-202ENST00000395354 LCE1AQ5T7P2 110 aa6.92□□□□□ -1.3
LMNB1-202ENST00000395354 MDN1Q9NU22 5596 aa6.89□□□□□ -1.31
LMNB1-202ENST00000395354 LUZP6Q538Z0 58 aa6.86□□□□□ -1.31
LMNB1-202ENST00000395354 LCE3CQ5T5A8 94 aa6.83□□□□□ -1.32
LMNB1-202ENST00000395354 MT1LQ93083 61 aa6.82□□□□□ -1.32
LMNB1-202ENST00000395354 KRTAP19-3Q7Z4W3 81 aa6.79□□□□□ -1.32
LMNB1-202ENST00000395354 NDUFAF8A1L188 74 aa6.78□□□□□ -1.32
LMNB1-202ENST00000395354 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
LMNB1-202ENST00000395354 MT1GP13640 62 aa6.71□□□□□ -1.34
LMNB1-202ENST00000395354 SPRR2DP22532 72 aa6.69□□□□□ -1.34
LMNB1-202ENST00000395354 MT1MQ8N339 61 aa6.59□□□□□ -1.35
LMNB1-202ENST00000395354 KRTAP4-7Q9BYR0 210 aa6.56□□□□□ -1.36
LMNB1-202ENST00000395354 KRTAP20-1Q3LI63 56 aa6.53□□□□□ -1.36
LMNB1-202ENST00000395354 KRTAP2-3P0C7H8 128 aa6.52□□□□□ -1.36
LMNB1-202ENST00000395354 KRTAP2-4Q9BYR9 128 aa6.52□□□□□ -1.36
LMNB1-202ENST00000395354 LCE3BQ5TA77 95 aa6.47□□□□□ -1.37
LMNB1-202ENST00000395354 KRTAP4-3Q9BYR4 195 aa6.44□□□□□ -1.38
LMNB1-202ENST00000395354 KRTAP9-6A8MVA2 160 aa6.43□□□□□ -1.38
LMNB1-202ENST00000395354 DSTQ03001 7570 aaKnown RBP6.39□□□□□ -1.39
LMNB1-202ENST00000395354 KRTAP2-2Q9BYT5 123 aa6.35□□□□□ -1.39
LMNB1-202ENST00000395354 KRTAP2-1Q9BYU5 128 aa6.35□□□□□ -1.39
LMNB1-202ENST00000395354 H3BS24 57 aa6.18□□□□□ -1.42
LMNB1-202ENST00000395354 LOC100996750A0A140TA64 210 aa6.15□□□□□ -1.42
LMNB1-202ENST00000395354 A0A0A0MQY5 61 aa6.04□□□□□ -1.44
LMNB1-202ENST00000395354 KRTAP5-5Q701N2 237 aaPredicted RBP5.97□□□□□ -1.45
LMNB1-202ENST00000395354 LCE4AQ5TA78 99 aa5.93□□□□□ -1.46
LMNB1-202ENST00000395354 KRTAP5-4Q6L8H1 288 aa5.93□□□□□ -1.46
LMNB1-202ENST00000395354 KRTAP4-9Q9BYQ8 210 aa5.89□□□□□ -1.47
LMNB1-202ENST00000395354 MT4P47944 62 aa5.82□□□□□ -1.48
LMNB1-202ENST00000395354 MT1AP04731 61 aa5.81□□□□□ -1.48
LMNB1-202ENST00000395354 LCE1DQ5T752 114 aa5.79□□□□□ -1.48
LMNB1-202ENST00000395354 KRTAP4-6Q9BYQ5 205 aa5.72□□□□□ -1.49
LMNB1-202ENST00000395354 KRTAP6-1Q3LI64 71 aa5.72□□□□□ -1.49
LMNB1-202ENST00000395354 KRTAP12-4P60329 112 aa5.71□□□□□ -1.5
LMNB1-202ENST00000395354 SYNE1Q8NF91 8797 aaKnown RBP5.67□□□□□ -1.5
LMNB1-202ENST00000395354 INE1O15225 51 aa5.67□□□□□ -1.5
LMNB1-202ENST00000395354 HMCN1Q96RW7 5635 aa5.64□□□□□ -1.51
LMNB1-202ENST00000395354 KRTAP20-2Q3LI61 65 aa5.57□□□□□ -1.52
LMNB1-202ENST00000395354 KRTAP9-4Q9BYQ2 154 aa5.51□□□□□ -1.53
LMNB1-202ENST00000395354 KRTAP5-3Q6L8H2 238 aa5.38□□□□□ -1.55
LMNB1-202ENST00000395354 KRTAP6-2Q3LI66 62 aa5.33□□□□□ -1.56
LMNB1-202ENST00000395354 KRTAP5-2Q701N4 177 aa5.29□□□□□ -1.56
LMNB1-202ENST00000395354 MT3P25713 68 aa5.26□□□□□ -1.57
LMNB1-202ENST00000395354 GPR98Q8WXG9 6306 aa5.22□□□□□ -1.57
LMNB1-202ENST00000395354 AHNAK2Q8IVF2 5795 aa5.19□□□□□ -1.58
LMNB1-202ENST00000395354 LCE3DQ9BYE3 92 aa5.16□□□□□ -1.58
LMNB1-202ENST00000395354 KRTAP5-10Q6L8G5 202 aa5.08□□□□□ -1.6
LMNB1-202ENST00000395354 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
LMNB1-202ENST00000395354 KRTAP4-11Q9BYQ6 195 aa4.95□□□□□ -1.62
LMNB1-202ENST00000395354 OBSCNQ5VST9 7968 aa4.9□□□□□ -1.63
LMNB1-202ENST00000395354 KRTAP5-7Q6L8G8 165 aa4.78□□□□□ -1.64
LMNB1-202ENST00000395354 KRTAP5-8O75690 187 aa4.77□□□□□ -1.65
LMNB1-202ENST00000395354 LCE1EQ5T753 118 aa4.67□□□□□ -1.66
LMNB1-202ENST00000395354 KRTAP5-1Q6L8H4 278 aa4.65□□□□□ -1.66
LMNB1-202ENST00000395354 MUC5ACP98088 5654 aa4.49□□□□□ -1.69
LMNB1-202ENST00000395354 PRM1P04553 51 aa4.43□□□□□ -1.7
LMNB1-202ENST00000395354 KRTAP9-9Q9BYP9 154 aa4.42□□□□□ -1.7
LMNB1-202ENST00000395354 LCE1BQ5T7P3 118 aa4.38□□□□□ -1.71
LMNB1-202ENST00000395354 KRTAP4-2Q9BYR5 136 aa4.36□□□□□ -1.71
LMNB1-202ENST00000395354 LCE1CQ5T751 118 aa4.34□□□□□ -1.71
LMNB1-202ENST00000395354 MUC5BQ9HC84 5762 aaPredicted RBP4.21□□□□□ -1.73
LMNB1-202ENST00000395354 AHNAKQ09666 5890 aaKnown RBP4.16□□□□□ -1.74
LMNB1-202ENST00000395354 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.01□□□□□ -1.77
LMNB1-202ENST00000395354 KRTAP5-11Q6L8G4 156 aa3.85□□□□□ -1.79
LMNB1-202ENST00000395354 KRTAP4-12Q9BQ66 201 aa3.79□□□□□ -1.8
LMNB1-202ENST00000395354 KRTAP21-2Q3LI59 83 aa3.76□□□□□ -1.81
LMNB1-202ENST00000395354 LCE1FQ5T754 118 aa3.62□□□□□ -1.83
LMNB1-202ENST00000395354 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
LMNB1-202ENST00000395354 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
LMNB1-202ENST00000395354 MUC19Q7Z5P9 8384 aa2.99□□□□□ -1.93
LMNB1-202ENST00000395354 KRTAP21-1Q3LI58 79 aa2.77□□□□□ -1.97
LMNB1-202ENST00000395354 MUC16Q8WXI7 14507 aa2.12□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms