RNA–Protein interactions for RNA: ENST00000395098.5

VPS26A-203, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5 BASIC

Gene VPS26A, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-203ENST00000395098 KRTAP6-3Q3LI67 103 aa4.66□□□□□ -1.66
VPS26A-203ENST00000395098 MDN1Q9NU22 5596 aa4.62□□□□□ -1.67
VPS26A-203ENST00000395098 KRTAP19-3Q7Z4W3 81 aa4.6□□□□□ -1.67
VPS26A-203ENST00000395098 KRTAP4-7Q9BYR0 210 aa4.58□□□□□ -1.68
VPS26A-203ENST00000395098 KRTAP9-7A8MTY7 169 aa4.57□□□□□ -1.68
VPS26A-203ENST00000395098 LCE1AQ5T7P2 110 aa4.57□□□□□ -1.68
VPS26A-203ENST00000395098 LCE3CQ5T5A8 94 aa4.56□□□□□ -1.68
VPS26A-203ENST00000395098 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
VPS26A-203ENST00000395098 MT1GP13640 62 aa4.54□□□□□ -1.68
VPS26A-203ENST00000395098 SPRR2EP22531 72 aa4.52□□□□□ -1.69
VPS26A-203ENST00000395098 SPRR2BP35325 72 aa4.52□□□□□ -1.69
VPS26A-203ENST00000395098 SPRR2AP35326 72 aa4.52□□□□□ -1.69
VPS26A-203ENST00000395098 MT1MQ8N339 61 aa4.52□□□□□ -1.69
VPS26A-203ENST00000395098 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
VPS26A-203ENST00000395098 KRTAP4-3Q9BYR4 195 aa4.48□□□□□ -1.69
VPS26A-203ENST00000395098 SPRR5A0A1B0GTR4 108 aa4.47□□□□□ -1.69
VPS26A-203ENST00000395098 NEBP20929 6669 aa4.41□□□□□ -1.7
VPS26A-203ENST00000395098 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
VPS26A-203ENST00000395098 DSTQ03001 7570 aaKnown RBP4.37□□□□□ -1.71
VPS26A-203ENST00000395098 SPRR2DP22532 72 aa4.35□□□□□ -1.71
VPS26A-203ENST00000395098 LUZP6Q538Z0 58 aa4.21□□□□□ -1.73
VPS26A-203ENST00000395098 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
VPS26A-203ENST00000395098 NDUFAF8A1L188 74 aa4.12□□□□□ -1.75
VPS26A-203ENST00000395098 KRTAP5-5Q701N2 237 aaPredicted RBP4.08□□□□□ -1.76
VPS26A-203ENST00000395098 KRTAP2-3P0C7H8 128 aa4.08□□□□□ -1.76
VPS26A-203ENST00000395098 KRTAP2-4Q9BYR9 128 aa4.08□□□□□ -1.76
VPS26A-203ENST00000395098 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
VPS26A-203ENST00000395098 KRTAP2-2Q9BYT5 123 aa3.99□□□□□ -1.77
VPS26A-203ENST00000395098 KRTAP2-1Q9BYU5 128 aa3.99□□□□□ -1.77
VPS26A-203ENST00000395098 MT1AP04731 61 aa3.96□□□□□ -1.78
VPS26A-203ENST00000395098 KRTAP6-1Q3LI64 71 aa3.96□□□□□ -1.78
VPS26A-203ENST00000395098 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
VPS26A-203ENST00000395098 SYNE1Q8NF91 8797 aaKnown RBP3.92□□□□□ -1.78
VPS26A-203ENST00000395098 LCE4AQ5TA78 99 aa3.83□□□□□ -1.8
VPS26A-203ENST00000395098 MT4P47944 62 aa3.81□□□□□ -1.8
VPS26A-203ENST00000395098 KRTAP4-9Q9BYQ8 210 aa3.81□□□□□ -1.8
VPS26A-203ENST00000395098 KRTAP9-9Q9BYP9 154 aa3.77□□□□□ -1.81
VPS26A-203ENST00000395098 KRTAP9-4Q9BYQ2 154 aa3.77□□□□□ -1.81
VPS26A-203ENST00000395098 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
VPS26A-203ENST00000395098 LCE1DQ5T752 114 aa3.75□□□□□ -1.81
VPS26A-203ENST00000395098 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
VPS26A-203ENST00000395098 HMCN1Q96RW7 5635 aa3.72□□□□□ -1.81
VPS26A-203ENST00000395098 KRTAP20-2Q3LI61 65 aa3.68□□□□□ -1.82
VPS26A-203ENST00000395098 KRTAP6-2Q3LI66 62 aa3.66□□□□□ -1.82
VPS26A-203ENST00000395098 MT3P25713 68 aa3.58□□□□□ -1.84
VPS26A-203ENST00000395098 KRTAP5-3Q6L8H2 238 aa3.57□□□□□ -1.84
VPS26A-203ENST00000395098 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
VPS26A-203ENST00000395098 KRTAP5-2Q701N4 177 aa3.55□□□□□ -1.84
VPS26A-203ENST00000395098 A0A0A0MQY5 61 aa3.52□□□□□ -1.85
VPS26A-203ENST00000395098 H3BS24 57 aa3.43□□□□□ -1.86
VPS26A-203ENST00000395098 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
VPS26A-203ENST00000395098 LCE3DQ9BYE3 92 aa3.4□□□□□ -1.86
VPS26A-203ENST00000395098 KRTAP4-11Q9BYQ6 195 aa3.37□□□□□ -1.87
VPS26A-203ENST00000395098 INE1O15225 51 aa3.32□□□□□ -1.88
VPS26A-203ENST00000395098 AHNAK2Q8IVF2 5795 aa3.31□□□□□ -1.88
VPS26A-203ENST00000395098 LCE3EQ5T5B0 92 aa3.29□□□□□ -1.88
VPS26A-203ENST00000395098 KRTAP5-10Q6L8G5 202 aa3.15□□□□□ -1.9
VPS26A-203ENST00000395098 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
VPS26A-203ENST00000395098 KRTAP5-8O75690 187 aa3.1□□□□□ -1.91
VPS26A-203ENST00000395098 KRTAP5-1Q6L8H4 278 aa3.1□□□□□ -1.91
VPS26A-203ENST00000395098 GPR98Q8WXG9 6306 aa3.08□□□□□ -1.92
VPS26A-203ENST00000395098 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
VPS26A-203ENST00000395098 MUC5ACP98088 5654 aa2.97□□□□□ -1.93
VPS26A-203ENST00000395098 KRTAP5-7Q6L8G8 165 aa2.96□□□□□ -1.94
VPS26A-203ENST00000395098 LCE1CQ5T751 118 aa2.92□□□□□ -1.94
VPS26A-203ENST00000395098 PRM1P04553 51 aa2.86□□□□□ -1.95
VPS26A-203ENST00000395098 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.72□□□□□ -1.97
VPS26A-203ENST00000395098 MUC5BQ9HC84 5762 aaPredicted RBP2.69□□□□□ -1.98
VPS26A-203ENST00000395098 KRTAP21-2Q3LI59 83 aa2.59□□□□□ -1.99
VPS26A-203ENST00000395098 KRTAP5-11Q6L8G4 156 aa2.58□□□□□ -2
VPS26A-203ENST00000395098 AHNAKQ09666 5890 aaKnown RBP2.51□□□□□ -2.01
VPS26A-203ENST00000395098 KRTAP4-4Q9BYR3 166 aa2.34□□□□□ -2.03
VPS26A-203ENST00000395098 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
VPS26A-203ENST00000395098 PHGR1C9JFL3 82 aa2.23□□□□□ -2.05
VPS26A-203ENST00000395098 MUC19Q7Z5P9 8384 aa2.05□□□□□ -2.08
VPS26A-203ENST00000395098 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
VPS26A-203ENST00000395098 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms