RNA–Protein interactions for RNA: ENST00000395090.5

RTN1-203, Transcript of reticulon 1, humanhuman

TSL 2 BASIC

Gene RTN1, Length 1,609 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-203ENST00000395090 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.88□□□□□ -1.63
RTN1-203ENST00000395090 PLAC4Q8WY50 150 aa4.86□□□□□ -1.63
RTN1-203ENST00000395090 CAMK2N1Q7Z7J9 78 aa4.78□□□□□ -1.64
RTN1-203ENST00000395090 USH2AO75445 5202 aa4.76□□□□□ -1.65
RTN1-203ENST00000395090 MT1XP80297 61 aa4.72□□□□□ -1.65
RTN1-203ENST00000395090 C10orf95Q9H7T3 257 aa4.7□□□□□ -1.66
RTN1-203ENST00000395090 KRTAP19-6Q3LI70 58 aa4.68□□□□□ -1.66
RTN1-203ENST00000395090 PRO2289Q9P1D8 64 aa4.67□□□□□ -1.66
RTN1-203ENST00000395090 SSPOA2VEC9 5147 aa4.62□□□□□ -1.67
RTN1-203ENST00000395090 FSIP2Q5CZC0 6907 aa4.57□□□□□ -1.68
RTN1-203ENST00000395090 TNP1P09430 55 aa4.56□□□□□ -1.68
RTN1-203ENST00000395090 CRCT1Q9UGL9 99 aa4.54□□□□□ -1.68
RTN1-203ENST00000395090 FCGBPQ9Y6R7 5405 aaPredicted RBP4.46□□□□□ -1.7
RTN1-203ENST00000395090 KRTAP5-9P26371 169 aa4.45□□□□□ -1.7
RTN1-203ENST00000395090 PP632Q6XCG6 107 aa4.41□□□□□ -1.7
RTN1-203ENST00000395090 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
RTN1-203ENST00000395090 KRTAP8-1Q8IUC2 63 aa4.32□□□□□ -1.72
RTN1-203ENST00000395090 KMT2DO14686 5537 aa4.26□□□□□ -1.73
RTN1-203ENST00000395090 KRTAP19-5Q3LI72 72 aa4.23□□□□□ -1.73
RTN1-203ENST00000395090 KRTAP19-7Q3SYF9 63 aa4.23□□□□□ -1.73
RTN1-203ENST00000395090 KRTAP5-1Q6L8H4 278 aa4.23□□□□□ -1.73
RTN1-203ENST00000395090 KRTAP12-3P60328 96 aa4.22□□□□□ -1.73
RTN1-203ENST00000395090 KRTAP5-4Q6L8H1 288 aa4.17□□□□□ -1.74
RTN1-203ENST00000395090 MT1EP04732 61 aa4.14□□□□□ -1.75
RTN1-203ENST00000395090 LCE3DQ9BYE3 92 aa4.13□□□□□ -1.75
RTN1-203ENST00000395090 MACF1Q9UPN3 7388 aaKnown RBP4.13□□□□□ -1.75
RTN1-203ENST00000395090 SPRR5A0A1B0GTR4 108 aa4.12□□□□□ -1.75
RTN1-203ENST00000395090 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
RTN1-203ENST00000395090 SPRR2FQ96RM1 72 aa4.1□□□□□ -1.75
RTN1-203ENST00000395090 LUZP6Q538Z0 58 aa4.06□□□□□ -1.76
RTN1-203ENST00000395090 MT1LQ93083 61 aa4.05□□□□□ -1.76
RTN1-203ENST00000395090 KRTAP4-4Q9BYR3 166 aa4.03□□□□□ -1.76
RTN1-203ENST00000395090 SYNE2Q8WXH0 6885 aaKnown RBP4.01□□□□□ -1.77
RTN1-203ENST00000395090 KRTAP19-3Q7Z4W3 81 aa4□□□□□ -1.77
RTN1-203ENST00000395090 MUC12Q9UKN1 5478 aa3.99□□□□□ -1.77
RTN1-203ENST00000395090 MT1GP13640 62 aa3.98□□□□□ -1.77
RTN1-203ENST00000395090 SPRR2EP22531 72 aa3.91□□□□□ -1.78
RTN1-203ENST00000395090 SPRR2BP35325 72 aa3.91□□□□□ -1.78
RTN1-203ENST00000395090 SPRR2AP35326 72 aa3.91□□□□□ -1.78
RTN1-203ENST00000395090 MT1MQ8N339 61 aa3.91□□□□□ -1.78
RTN1-203ENST00000395090 MDN1Q9NU22 5596 aa3.87□□□□□ -1.79
RTN1-203ENST00000395090 KRTAP5-5Q701N2 237 aaPredicted RBP3.87□□□□□ -1.79
RTN1-203ENST00000395090 KRTAP4-3Q9BYR4 195 aa3.81□□□□□ -1.8
RTN1-203ENST00000395090 SPRR2DP22532 72 aa3.77□□□□□ -1.81
RTN1-203ENST00000395090 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
RTN1-203ENST00000395090 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
RTN1-203ENST00000395090 NEBP20929 6669 aa3.68□□□□□ -1.82
RTN1-203ENST00000395090 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
RTN1-203ENST00000395090 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
RTN1-203ENST00000395090 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
RTN1-203ENST00000395090 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
RTN1-203ENST00000395090 DSTQ03001 7570 aaKnown RBP3.6□□□□□ -1.83
RTN1-203ENST00000395090 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
RTN1-203ENST00000395090 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
RTN1-203ENST00000395090 INE1O15225 51 aa3.52□□□□□ -1.85
RTN1-203ENST00000395090 MT1AP04731 61 aa3.44□□□□□ -1.86
RTN1-203ENST00000395090 KRTAP6-1Q3LI64 71 aa3.41□□□□□ -1.86
RTN1-203ENST00000395090 KRTAP5-8O75690 187 aa3.33□□□□□ -1.88
RTN1-203ENST00000395090 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
RTN1-203ENST00000395090 MT4P47944 62 aa3.26□□□□□ -1.89
RTN1-203ENST00000395090 HMCN1Q96RW7 5635 aa3.26□□□□□ -1.89
RTN1-203ENST00000395090 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
RTN1-203ENST00000395090 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
RTN1-203ENST00000395090 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.91
RTN1-203ENST00000395090 KRTAP5-7Q6L8G8 165 aa3.02□□□□□ -1.93
RTN1-203ENST00000395090 GPR98Q8WXG9 6306 aa2.97□□□□□ -1.93
RTN1-203ENST00000395090 KRTAP5-10Q6L8G5 202 aa2.88□□□□□ -1.95
RTN1-203ENST00000395090 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
RTN1-203ENST00000395090 AHNAK2Q8IVF2 5795 aa2.82□□□□□ -1.96
RTN1-203ENST00000395090 PRM1P04553 51 aa2.6□□□□□ -1.99
RTN1-203ENST00000395090 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
RTN1-203ENST00000395090 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
RTN1-203ENST00000395090 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
RTN1-203ENST00000395090 AHNAKQ09666 5890 aaKnown RBP2.27□□□□□ -2.05
RTN1-203ENST00000395090 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
RTN1-203ENST00000395090 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
RTN1-203ENST00000395090 MUC16Q8WXI7 14507 aa1.33□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 93.5 ms