RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 KRTAP9-6A8MVA2 160 aa6.45□□□□□ -1.38
SIL1-202ENST00000394817 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
SIL1-202ENST00000394817 MUC12Q9UKN1 5478 aa6.36□□□□□ -1.39
SIL1-202ENST00000394817 SYNE2Q8WXH0 6885 aaKnown RBP6.31□□□□□ -1.4
SIL1-202ENST00000394817 SPRR2FQ96RM1 72 aa6.29□□□□□ -1.4
SIL1-202ENST00000394817 KRTAP19-3Q7Z4W3 81 aa6.22□□□□□ -1.41
SIL1-202ENST00000394817 INE1O15225 51 aa6.19□□□□□ -1.42
SIL1-202ENST00000394817 MT1GP13640 62 aa6.19□□□□□ -1.42
SIL1-202ENST00000394817 KRTAP2-3P0C7H8 128 aa6.17□□□□□ -1.42
SIL1-202ENST00000394817 MT1MQ8N339 61 aa6.17□□□□□ -1.42
SIL1-202ENST00000394817 KRTAP2-4Q9BYR9 128 aa6.17□□□□□ -1.42
SIL1-202ENST00000394817 KRTAP2-1Q9BYU5 128 aa6.17□□□□□ -1.42
SIL1-202ENST00000394817 KRTAP4-3Q9BYR4 195 aa6.11□□□□□ -1.43
SIL1-202ENST00000394817 KRTAP5-9P26371 169 aa6.11□□□□□ -1.43
SIL1-202ENST00000394817 MDN1Q9NU22 5596 aa6.08□□□□□ -1.44
SIL1-202ENST00000394817 LCE5AQ5TCM9 118 aa6.07□□□□□ -1.44
SIL1-202ENST00000394817 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.07□□□□□ -1.44
SIL1-202ENST00000394817 LOC100996750A0A140TA64 210 aa6.02□□□□□ -1.45
SIL1-202ENST00000394817 LCE1AQ5T7P2 110 aa5.97□□□□□ -1.45
SIL1-202ENST00000394817 KRTAP6-3Q3LI67 103 aa5.92□□□□□ -1.46
SIL1-202ENST00000394817 SPRR2EP22531 72 aa5.91□□□□□ -1.46
SIL1-202ENST00000394817 SPRR2BP35325 72 aa5.91□□□□□ -1.46
SIL1-202ENST00000394817 SPRR2AP35326 72 aa5.91□□□□□ -1.46
SIL1-202ENST00000394817 KRTAP9-7A8MTY7 169 aa5.86□□□□□ -1.47
SIL1-202ENST00000394817 DSTQ03001 7570 aaKnown RBP5.85□□□□□ -1.47
SIL1-202ENST00000394817 SPRR2DP22532 72 aa5.68□□□□□ -1.5
SIL1-202ENST00000394817 NEBP20929 6669 aa5.62□□□□□ -1.51
SIL1-202ENST00000394817 MT1AP04731 61 aa5.52□□□□□ -1.53
SIL1-202ENST00000394817 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
SIL1-202ENST00000394817 KRTAP6-1Q3LI64 71 aa5.51□□□□□ -1.53
SIL1-202ENST00000394817 LCE3BQ5TA77 95 aa5.49□□□□□ -1.53
SIL1-202ENST00000394817 KRTAP12-4P60329 112 aa5.33□□□□□ -1.56
SIL1-202ENST00000394817 KRTAP4-9Q9BYQ8 210 aa5.29□□□□□ -1.56
SIL1-202ENST00000394817 SYNE1Q8NF91 8797 aaKnown RBP5.25□□□□□ -1.57
SIL1-202ENST00000394817 KRTAP20-1Q3LI63 56 aa5.2□□□□□ -1.58
SIL1-202ENST00000394817 KRTAP9-4Q9BYQ2 154 aa5.2□□□□□ -1.58
SIL1-202ENST00000394817 KRTAP5-4Q6L8H1 288 aa5.14□□□□□ -1.59
SIL1-202ENST00000394817 LCE3DQ9BYE3 92 aa5.14□□□□□ -1.59
SIL1-202ENST00000394817 KRTAP2-2Q9BYT5 123 aa5.07□□□□□ -1.6
SIL1-202ENST00000394817 LCE3EQ5T5B0 92 aa5.05□□□□□ -1.6
SIL1-202ENST00000394817 MT4P47944 62 aa4.99□□□□□ -1.61
SIL1-202ENST00000394817 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
SIL1-202ENST00000394817 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
SIL1-202ENST00000394817 KRTAP4-6Q9BYQ5 205 aa4.97□□□□□ -1.61
SIL1-202ENST00000394817 MT3P25713 68 aa4.96□□□□□ -1.62
SIL1-202ENST00000394817 HMCN1Q96RW7 5635 aa4.87□□□□□ -1.63
SIL1-202ENST00000394817 LCE1DQ5T752 114 aa4.84□□□□□ -1.63
SIL1-202ENST00000394817 KRTAP20-2Q3LI61 65 aa4.83□□□□□ -1.64
SIL1-202ENST00000394817 KRTAP5-2Q701N4 177 aa4.7□□□□□ -1.66
SIL1-202ENST00000394817 PRM1P04553 51 aa4.68□□□□□ -1.66
SIL1-202ENST00000394817 KRTAP5-3Q6L8H2 238 aa4.64□□□□□ -1.67
SIL1-202ENST00000394817 OBSCNQ5VST9 7968 aa4.58□□□□□ -1.68
SIL1-202ENST00000394817 AHNAK2Q8IVF2 5795 aa4.24□□□□□ -1.73
SIL1-202ENST00000394817 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
SIL1-202ENST00000394817 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
SIL1-202ENST00000394817 MUC5ACP98088 5654 aa4.12□□□□□ -1.75
SIL1-202ENST00000394817 KRTAP5-1Q6L8H4 278 aa4.06□□□□□ -1.76
SIL1-202ENST00000394817 LCE1BQ5T7P3 118 aa4.01□□□□□ -1.77
SIL1-202ENST00000394817 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
SIL1-202ENST00000394817 GPR98Q8WXG9 6306 aa4.01□□□□□ -1.77
SIL1-202ENST00000394817 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
SIL1-202ENST00000394817 KRTAP4-2Q9BYR5 136 aa3.94□□□□□ -1.78
SIL1-202ENST00000394817 LCE1CQ5T751 118 aa3.92□□□□□ -1.78
SIL1-202ENST00000394817 KRTAP5-7Q6L8G8 165 aa3.83□□□□□ -1.8
SIL1-202ENST00000394817 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.72□□□□□ -1.81
SIL1-202ENST00000394817 KRTAP21-2Q3LI59 83 aa3.6□□□□□ -1.83
SIL1-202ENST00000394817 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
SIL1-202ENST00000394817 KRTAP9-9Q9BYP9 154 aa3.56□□□□□ -1.84
SIL1-202ENST00000394817 MUC5BQ9HC84 5762 aaPredicted RBP3.52□□□□□ -1.85
SIL1-202ENST00000394817 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
SIL1-202ENST00000394817 KRTAP4-12Q9BQ66 201 aa3.31□□□□□ -1.88
SIL1-202ENST00000394817 AHNAKQ09666 5890 aaKnown RBP3.23□□□□□ -1.89
SIL1-202ENST00000394817 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
SIL1-202ENST00000394817 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
SIL1-202ENST00000394817 KRTAP21-1Q3LI58 79 aa2.95□□□□□ -1.94
SIL1-202ENST00000394817 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
SIL1-202ENST00000394817 MUC16Q8WXI7 14507 aa1.95□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 94.5 ms