RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 FCGBPQ9Y6R7 5405 aaPredicted RBP7.78□□□□□ -1.16
RARA-202ENST00000394081 KRTAP9-7A8MTY7 169 aa7.73□□□□□ -1.17
RARA-202ENST00000394081 KRTAP4-7Q9BYR0 210 aa7.72□□□□□ -1.17
RARA-202ENST00000394081 MT1LQ93083 61 aa7.7□□□□□ -1.18
RARA-202ENST00000394081 KMT2DO14686 5537 aa7.64□□□□□ -1.19
RARA-202ENST00000394081 MT1EP04732 61 aa7.62□□□□□ -1.19
RARA-202ENST00000394081 MACF1Q9UPN3 7388 aaKnown RBP7.61□□□□□ -1.19
RARA-202ENST00000394081 SYNE2Q8WXH0 6885 aaKnown RBP7.56□□□□□ -1.2
RARA-202ENST00000394081 KRTAP19-6Q3LI70 58 aa7.45□□□□□ -1.22
RARA-202ENST00000394081 KRTAP12-4P60329 112 aa7.21□□□□□ -1.25
RARA-202ENST00000394081 LOC100996750A0A140TA64 210 aa7.17□□□□□ -1.26
RARA-202ENST00000394081 KRTAP6-3Q3LI67 103 aa7.17□□□□□ -1.26
RARA-202ENST00000394081 MT1GP13640 62 aa7.13□□□□□ -1.27
RARA-202ENST00000394081 MT1MQ8N339 61 aa7.08□□□□□ -1.28
RARA-202ENST00000394081 KRTAP4-3Q9BYR4 195 aa7.08□□□□□ -1.28
RARA-202ENST00000394081 MUC12Q9UKN1 5478 aa7.06□□□□□ -1.28
RARA-202ENST00000394081 KRTAP19-3Q7Z4W3 81 aa7.03□□□□□ -1.28
RARA-202ENST00000394081 NEBP20929 6669 aa7□□□□□ -1.29
RARA-202ENST00000394081 MDN1Q9NU22 5596 aa6.85□□□□□ -1.31
RARA-202ENST00000394081 MT1AP04731 61 aa6.85□□□□□ -1.31
RARA-202ENST00000394081 KRTAP5-9P26371 169 aa6.79□□□□□ -1.32
RARA-202ENST00000394081 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
RARA-202ENST00000394081 KRTAP20-1Q3LI63 56 aa6.73□□□□□ -1.33
RARA-202ENST00000394081 LCE3BQ5TA77 95 aa6.71□□□□□ -1.34
RARA-202ENST00000394081 SPRR2FQ96RM1 72 aa6.61□□□□□ -1.35
RARA-202ENST00000394081 LCE3DQ9BYE3 92 aa6.59□□□□□ -1.36
RARA-202ENST00000394081 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
RARA-202ENST00000394081 LCE3EQ5T5B0 92 aa6.57□□□□□ -1.36
RARA-202ENST00000394081 SPRR2EP22531 72 aa6.53□□□□□ -1.36
RARA-202ENST00000394081 SPRR2BP35325 72 aa6.53□□□□□ -1.36
RARA-202ENST00000394081 SPRR2AP35326 72 aa6.53□□□□□ -1.36
RARA-202ENST00000394081 KRTAP6-1Q3LI64 71 aa6.49□□□□□ -1.37
RARA-202ENST00000394081 KRTAP5-5Q701N2 237 aaPredicted RBP6.48□□□□□ -1.37
RARA-202ENST00000394081 LCE1AQ5T7P2 110 aa6.44□□□□□ -1.38
RARA-202ENST00000394081 PRM1P04553 51 aa6.42□□□□□ -1.38
RARA-202ENST00000394081 SYNE1Q8NF91 8797 aaKnown RBP6.33□□□□□ -1.4
RARA-202ENST00000394081 SPRR2DP22532 72 aa6.3□□□□□ -1.4
RARA-202ENST00000394081 KRTAP2-2Q9BYT5 123 aa6.28□□□□□ -1.4
RARA-202ENST00000394081 DSTQ03001 7570 aaKnown RBP6.24□□□□□ -1.41
RARA-202ENST00000394081 KRTAP6-2Q3LI66 62 aa6.1□□□□□ -1.43
RARA-202ENST00000394081 KRTAP9-4Q9BYQ2 154 aa6.06□□□□□ -1.44
RARA-202ENST00000394081 MT3P25713 68 aa5.81□□□□□ -1.48
RARA-202ENST00000394081 GPR98Q8WXG9 6306 aa5.76□□□□□ -1.49
RARA-202ENST00000394081 LCE1DQ5T752 114 aa5.64□□□□□ -1.51
RARA-202ENST00000394081 HMCN1Q96RW7 5635 aa5.59□□□□□ -1.51
RARA-202ENST00000394081 MT4P47944 62 aa5.59□□□□□ -1.51
RARA-202ENST00000394081 LCE4AQ5TA78 99 aa5.49□□□□□ -1.53
RARA-202ENST00000394081 KRTAP4-6Q9BYQ5 205 aa5.43□□□□□ -1.54
RARA-202ENST00000394081 KRTAP5-4Q6L8H1 288 aa5.42□□□□□ -1.54
RARA-202ENST00000394081 AHNAK2Q8IVF2 5795 aa5.39□□□□□ -1.55
RARA-202ENST00000394081 KRTAP5-10Q6L8G5 202 aa5.29□□□□□ -1.56
RARA-202ENST00000394081 OBSCNQ5VST9 7968 aa5.25□□□□□ -1.57
RARA-202ENST00000394081 KRTAP20-2Q3LI61 65 aa5.15□□□□□ -1.58
RARA-202ENST00000394081 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
RARA-202ENST00000394081 KRTAP5-7Q6L8G8 165 aa5.07□□□□□ -1.6
RARA-202ENST00000394081 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
RARA-202ENST00000394081 LCE1EQ5T753 118 aa4.9□□□□□ -1.62
RARA-202ENST00000394081 MUC5ACP98088 5654 aa4.84□□□□□ -1.64
RARA-202ENST00000394081 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
RARA-202ENST00000394081 KRTAP5-1Q6L8H4 278 aa4.69□□□□□ -1.66
RARA-202ENST00000394081 KRTAP5-8O75690 187 aa4.59□□□□□ -1.67
RARA-202ENST00000394081 MUC5BQ9HC84 5762 aaPredicted RBP4.49□□□□□ -1.69
RARA-202ENST00000394081 LCE1BQ5T7P3 118 aa4.47□□□□□ -1.69
RARA-202ENST00000394081 AHNAKQ09666 5890 aaKnown RBP4.41□□□□□ -1.7
RARA-202ENST00000394081 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
RARA-202ENST00000394081 KRTAP4-2Q9BYR5 136 aa4.35□□□□□ -1.71
RARA-202ENST00000394081 KRTAP9-9Q9BYP9 154 aa4.33□□□□□ -1.72
RARA-202ENST00000394081 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.25□□□□□ -1.73
RARA-202ENST00000394081 KRTAP21-2Q3LI59 83 aa4.2□□□□□ -1.74
RARA-202ENST00000394081 KRTAP21-1Q3LI58 79 aa4.19□□□□□ -1.74
RARA-202ENST00000394081 KRTAP5-11Q6L8G4 156 aa3.74□□□□□ -1.81
RARA-202ENST00000394081 KRTAP4-4Q9BYR3 166 aa3.69□□□□□ -1.82
RARA-202ENST00000394081 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
RARA-202ENST00000394081 KRTAP4-12Q9BQ66 201 aa3.61□□□□□ -1.83
RARA-202ENST00000394081 MUC19Q7Z5P9 8384 aa3.54□□□□□ -1.84
RARA-202ENST00000394081 PHGR1C9JFL3 82 aa3.21□□□□□ -1.9
RARA-202ENST00000394081 MUC16Q8WXI7 14507 aa2.22□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 7.8 ms