RNA–Protein interactions for RNA: ENST00000394011.7

RALGPS1-206, Transcript of Ral GEF with PH domain and SH3 binding motif 1, humanhuman

TSL 1 (best) BASIC

Gene RALGPS1, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RALGPS1-206ENST00000394011 K7ERS5 55 aa7.15□□□□□ -1.26
RALGPS1-206ENST00000394011 LCE3AQ5TA76 89 aa7.13□□□□□ -1.27
RALGPS1-206ENST00000394011 RPS28P62857 69 aaKnown RBP7.11□□□□□ -1.27
RALGPS1-206ENST00000394011 A6NED7 52 aa7.07□□□□□ -1.28
RALGPS1-206ENST00000394011 MT1GP13640 62 aa7.06□□□□□ -1.28
RALGPS1-206ENST00000394011 LCE1DQ5T752 114 aa7.01□□□□□ -1.29
RALGPS1-206ENST00000394011 HMCN1Q96RW7 5635 aa6.99□□□□□ -1.29
RALGPS1-206ENST00000394011 MT1MQ8N339 61 aa6.97□□□□□ -1.29
RALGPS1-206ENST00000394011 KRTAP25-1Q3LHN0 102 aa6.96□□□□□ -1.3
RALGPS1-206ENST00000394011 MT1LQ93083 61 aa6.94□□□□□ -1.3
RALGPS1-206ENST00000394011 PP632Q6XCG6 107 aa6.93□□□□□ -1.3
RALGPS1-206ENST00000394011 AHNAK2Q8IVF2 5795 aa6.92□□□□□ -1.3
RALGPS1-206ENST00000394011 LCE4AQ5TA78 99 aa6.91□□□□□ -1.3
RALGPS1-206ENST00000394011 KRTAP12-3P60328 96 aa6.87□□□□□ -1.31
RALGPS1-206ENST00000394011 MT4P47944 62 aa6.86□□□□□ -1.31
RALGPS1-206ENST00000394011 KRTAP5-10Q6L8G5 202 aa6.85□□□□□ -1.31
RALGPS1-206ENST00000394011 KRTAP4-3Q9BYR4 195 aa6.84□□□□□ -1.31
RALGPS1-206ENST00000394011 KRTAP5-4Q6L8H1 288 aa6.82□□□□□ -1.32
RALGPS1-206ENST00000394011 CDC42SE1Q9NRR8 79 aa6.77□□□□□ -1.33
RALGPS1-206ENST00000394011 KRTAP4-6Q9BYQ5 205 aa6.71□□□□□ -1.34
RALGPS1-206ENST00000394011 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
RALGPS1-206ENST00000394011 ROMO1P60602 79 aa6.68□□□□□ -1.34
RALGPS1-206ENST00000394011 KRTAP5-7Q6L8G8 165 aa6.67□□□□□ -1.34
RALGPS1-206ENST00000394011 KRTAP4-7Q9BYR0 210 aa6.62□□□□□ -1.35
RALGPS1-206ENST00000394011 KRTAP5-3Q6L8H2 238 aa6.53□□□□□ -1.36
RALGPS1-206ENST00000394011 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
RALGPS1-206ENST00000394011 KRTAP19-4Q3LI73 84 aa6.47□□□□□ -1.37
RALGPS1-206ENST00000394011 KRTAP5-5Q701N2 237 aaPredicted RBP6.47□□□□□ -1.37
RALGPS1-206ENST00000394011 KRTAP20-2Q3LI61 65 aa6.42□□□□□ -1.38
RALGPS1-206ENST00000394011 SPRR5A0A1B0GTR4 108 aa6.34□□□□□ -1.39
RALGPS1-206ENST00000394011 LCE3CQ5T5A8 94 aa6.34□□□□□ -1.39
RALGPS1-206ENST00000394011 BRK1Q8WUW1 75 aa6.31□□□□□ -1.4
RALGPS1-206ENST00000394011 LOC100996750A0A140TA64 210 aa6.28□□□□□ -1.4
RALGPS1-206ENST00000394011 SYNE1Q8NF91 8797 aaKnown RBP6.24□□□□□ -1.41
RALGPS1-206ENST00000394011 KRTAP12-4P60329 112 aa6.22□□□□□ -1.41
RALGPS1-206ENST00000394011 KRTAP9-6A8MVA2 160 aa5.95□□□□□ -1.46
RALGPS1-206ENST00000394011 KRTAP5-2Q701N4 177 aa5.95□□□□□ -1.46
RALGPS1-206ENST00000394011 PMAIP1Q13794 54 aa5.94□□□□□ -1.46
RALGPS1-206ENST00000394011 AHNAKQ09666 5890 aaKnown RBP5.94□□□□□ -1.46
RALGPS1-206ENST00000394011 MT1AP04731 61 aa5.9□□□□□ -1.46
RALGPS1-206ENST00000394011 KRTAP6-1Q3LI64 71 aa5.9□□□□□ -1.46
RALGPS1-206ENST00000394011 KRTAP4-11Q9BYQ6 195 aa5.9□□□□□ -1.46
RALGPS1-206ENST00000394011 MUC5ACP98088 5654 aa5.83□□□□□ -1.48
RALGPS1-206ENST00000394011 MUC5BQ9HC84 5762 aaPredicted RBP5.82□□□□□ -1.48
RALGPS1-206ENST00000394011 KRTAP5-8O75690 187 aa5.75□□□□□ -1.49
RALGPS1-206ENST00000394011 KRTAP9-4Q9BYQ2 154 aa5.72□□□□□ -1.49
RALGPS1-206ENST00000394011 PRAC1Q96KF2 57 aa5.67□□□□□ -1.5
RALGPS1-206ENST00000394011 KRTAP6-2Q3LI66 62 aa5.65□□□□□ -1.5
RALGPS1-206ENST00000394011 PRO0628Q9UI54 55 aa5.64□□□□□ -1.51
RALGPS1-206ENST00000394011 OBSCNQ5VST9 7968 aa5.53□□□□□ -1.52
RALGPS1-206ENST00000394011 KRTAP9-9Q9BYP9 154 aa5.53□□□□□ -1.52
RALGPS1-206ENST00000394011 MT3P25713 68 aa5.41□□□□□ -1.54
RALGPS1-206ENST00000394011 KRTAP5-1Q6L8H4 278 aa5.37□□□□□ -1.55
RALGPS1-206ENST00000394011 KTN1-AS1Q86SY8 53 aa5.36□□□□□ -1.55
RALGPS1-206ENST00000394011 SVIPQ8NHG7 77 aa5.16□□□□□ -1.58
RALGPS1-206ENST00000394011 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
RALGPS1-206ENST00000394011 KRTAP4-2Q9BYR5 136 aa4.81□□□□□ -1.64
RALGPS1-206ENST00000394011 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
RALGPS1-206ENST00000394011 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
RALGPS1-206ENST00000394011 LCE1CQ5T751 118 aa4.66□□□□□ -1.66
RALGPS1-206ENST00000394011 LCE3DQ9BYE3 92 aa4.63□□□□□ -1.67
RALGPS1-206ENST00000394011 LCE3EQ5T5B0 92 aa4.4□□□□□ -1.71
RALGPS1-206ENST00000394011 KRTAP4-12Q9BQ66 201 aa4.39□□□□□ -1.71
RALGPS1-206ENST00000394011 KRTAP5-11Q6L8G4 156 aa4.25□□□□□ -1.73
RALGPS1-206ENST00000394011 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.24□□□□□ -1.73
RALGPS1-206ENST00000394011 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
RALGPS1-206ENST00000394011 NDUFAF8A1L188 74 aa4.01□□□□□ -1.77
RALGPS1-206ENST00000394011 PHGR1C9JFL3 82 aa3.99□□□□□ -1.77
RALGPS1-206ENST00000394011 KRTAP21-2Q3LI59 83 aa3.91□□□□□ -1.78
RALGPS1-206ENST00000394011 KRTAP4-4Q9BYR3 166 aa3.58□□□□□ -1.84
RALGPS1-206ENST00000394011 PRM1P04553 51 aa3.43□□□□□ -1.86
RALGPS1-206ENST00000394011 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
RALGPS1-206ENST00000394011 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
RALGPS1-206ENST00000394011 INE1O15225 51 aa3.24□□□□□ -1.89
RALGPS1-206ENST00000394011 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
RALGPS1-206ENST00000394011 MUC16Q8WXI7 14507 aa2.49□□□□□ -2.01
RALGPS1-206ENST00000394011 H3BS24 57 aa1.88□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 662.5 ms