RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 MT1LQ93083 61 aa8.68□□□□□ -1.02
LRFN4-202ENST00000393952 LCE1AQ5T7P2 110 aa8.64□□□□□ -1.03
LRFN4-202ENST00000393952 SPRR2EP22531 72 aa8.63□□□□□ -1.03
LRFN4-202ENST00000393952 SPRR2BP35325 72 aa8.63□□□□□ -1.03
LRFN4-202ENST00000393952 SPRR2AP35326 72 aa8.63□□□□□ -1.03
LRFN4-202ENST00000393952 KRTAP19-3Q7Z4W3 81 aa8.62□□□□□ -1.03
LRFN4-202ENST00000393952 NEBP20929 6669 aa8.54□□□□□ -1.04
LRFN4-202ENST00000393952 LCE5AQ5TCM9 118 aa8.51□□□□□ -1.05
LRFN4-202ENST00000393952 MT1GP13640 62 aa8.5□□□□□ -1.05
LRFN4-202ENST00000393952 MT1MQ8N339 61 aa8.42□□□□□ -1.06
LRFN4-202ENST00000393952 KRTAP19-4Q3LI73 84 aa8.38□□□□□ -1.07
LRFN4-202ENST00000393952 KRTAP4-7Q9BYR0 210 aa8.37□□□□□ -1.07
LRFN4-202ENST00000393952 LCE3CQ5T5A8 94 aa8.35□□□□□ -1.07
LRFN4-202ENST00000393952 SPRR2DP22532 72 aa8.32□□□□□ -1.08
LRFN4-202ENST00000393952 KRTAP4-3Q9BYR4 195 aa8.26□□□□□ -1.09
LRFN4-202ENST00000393952 DSTQ03001 7570 aaKnown RBP8.09□□□□□ -1.11
LRFN4-202ENST00000393952 LCE3BQ5TA77 95 aa8.01□□□□□ -1.13
LRFN4-202ENST00000393952 SPRR5A0A1B0GTR4 108 aa7.97□□□□□ -1.13
LRFN4-202ENST00000393952 KRTAP2-3P0C7H8 128 aa7.93□□□□□ -1.14
LRFN4-202ENST00000393952 KRTAP2-4Q9BYR9 128 aa7.93□□□□□ -1.14
LRFN4-202ENST00000393952 KRTAP9-6A8MVA2 160 aa7.91□□□□□ -1.14
LRFN4-202ENST00000393952 KRTAP20-1Q3LI63 56 aa7.91□□□□□ -1.14
LRFN4-202ENST00000393952 LOC100996750A0A140TA64 210 aa7.88□□□□□ -1.15
LRFN4-202ENST00000393952 KRTAP2-2Q9BYT5 123 aa7.74□□□□□ -1.17
LRFN4-202ENST00000393952 KRTAP2-1Q9BYU5 128 aa7.74□□□□□ -1.17
LRFN4-202ENST00000393952 KRTAP5-5Q701N2 237 aaPredicted RBP7.61□□□□□ -1.19
LRFN4-202ENST00000393952 LUZP6Q538Z0 58 aa7.49□□□□□ -1.21
LRFN4-202ENST00000393952 KRTAP5-4Q6L8H1 288 aa7.43□□□□□ -1.22
LRFN4-202ENST00000393952 MT1AP04731 61 aa7.37□□□□□ -1.23
LRFN4-202ENST00000393952 LCE4AQ5TA78 99 aa7.36□□□□□ -1.23
LRFN4-202ENST00000393952 KRTAP6-1Q3LI64 71 aa7.32□□□□□ -1.24
LRFN4-202ENST00000393952 SYNE1Q8NF91 8797 aaKnown RBP7.25□□□□□ -1.25
LRFN4-202ENST00000393952 KRTAP4-9Q9BYQ8 210 aa7.25□□□□□ -1.25
LRFN4-202ENST00000393952 MT4P47944 62 aa7.24□□□□□ -1.25
LRFN4-202ENST00000393952 LCE1DQ5T752 114 aa7.17□□□□□ -1.26
LRFN4-202ENST00000393952 KRTAP12-4P60329 112 aa7.14□□□□□ -1.27
LRFN4-202ENST00000393952 KRTAP4-6Q9BYQ5 205 aa7.14□□□□□ -1.27
LRFN4-202ENST00000393952 NDUFAF8A1L188 74 aa7.08□□□□□ -1.28
LRFN4-202ENST00000393952 HMCN1Q96RW7 5635 aa7.07□□□□□ -1.28
LRFN4-202ENST00000393952 KRTAP9-4Q9BYQ2 154 aa7.03□□□□□ -1.28
LRFN4-202ENST00000393952 KRTAP20-2Q3LI61 65 aa6.97□□□□□ -1.29
LRFN4-202ENST00000393952 KRTAP6-2Q3LI66 62 aa6.8□□□□□ -1.32
LRFN4-202ENST00000393952 KRTAP5-3Q6L8H2 238 aa6.73□□□□□ -1.33
LRFN4-202ENST00000393952 MT3P25713 68 aa6.69□□□□□ -1.34
LRFN4-202ENST00000393952 KRTAP5-2Q701N4 177 aa6.69□□□□□ -1.34
LRFN4-202ENST00000393952 GPR98Q8WXG9 6306 aa6.56□□□□□ -1.36
LRFN4-202ENST00000393952 AHNAK2Q8IVF2 5795 aa6.48□□□□□ -1.37
LRFN4-202ENST00000393952 OBSCNQ5VST9 7968 aa6.24□□□□□ -1.41
LRFN4-202ENST00000393952 KRTAP5-10Q6L8G5 202 aa6.23□□□□□ -1.41
LRFN4-202ENST00000393952 LCE3DQ9BYE3 92 aa6.21□□□□□ -1.42
LRFN4-202ENST00000393952 KRTAP4-11Q9BYQ6 195 aa6.12□□□□□ -1.43
LRFN4-202ENST00000393952 A0A0A0MQY5 61 aa6.07□□□□□ -1.44
LRFN4-202ENST00000393952 LCE3EQ5T5B0 92 aa5.99□□□□□ -1.45
LRFN4-202ENST00000393952 KRTAP5-7Q6L8G8 165 aa5.97□□□□□ -1.45
LRFN4-202ENST00000393952 KRTAP5-8O75690 187 aa5.9□□□□□ -1.46
LRFN4-202ENST00000393952 LCE1EQ5T753 118 aa5.88□□□□□ -1.47
LRFN4-202ENST00000393952 KRTAP5-1Q6L8H4 278 aa5.84□□□□□ -1.48
LRFN4-202ENST00000393952 INE1O15225 51 aa5.79□□□□□ -1.48
LRFN4-202ENST00000393952 MUC5ACP98088 5654 aa5.68□□□□□ -1.5
LRFN4-202ENST00000393952 LCE1BQ5T7P3 118 aa5.55□□□□□ -1.52
LRFN4-202ENST00000393952 KRTAP4-2Q9BYR5 136 aa5.53□□□□□ -1.52
LRFN4-202ENST00000393952 H3BS24 57 aa5.52□□□□□ -1.53
LRFN4-202ENST00000393952 LCE1CQ5T751 118 aa5.47□□□□□ -1.53
LRFN4-202ENST00000393952 KRTAP9-9Q9BYP9 154 aa5.39□□□□□ -1.55
LRFN4-202ENST00000393952 MUC5BQ9HC84 5762 aaPredicted RBP5.21□□□□□ -1.58
LRFN4-202ENST00000393952 AHNAKQ09666 5890 aaKnown RBP5.11□□□□□ -1.59
LRFN4-202ENST00000393952 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.09□□□□□ -1.59
LRFN4-202ENST00000393952 PRM1P04553 51 aa5.08□□□□□ -1.6
LRFN4-202ENST00000393952 KRTAP5-11Q6L8G4 156 aa4.87□□□□□ -1.63
LRFN4-202ENST00000393952 KRTAP21-2Q3LI59 83 aa4.79□□□□□ -1.64
LRFN4-202ENST00000393952 KRTAP4-12Q9BQ66 201 aa4.71□□□□□ -1.66
LRFN4-202ENST00000393952 LCE1FQ5T754 118 aa4.47□□□□□ -1.69
LRFN4-202ENST00000393952 KRTAP4-4Q9BYR3 166 aa4.31□□□□□ -1.72
LRFN4-202ENST00000393952 PHGR1C9JFL3 82 aa4.19□□□□□ -1.74
LRFN4-202ENST00000393952 MUC19Q7Z5P9 8384 aa3.79□□□□□ -1.8
LRFN4-202ENST00000393952 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
LRFN4-202ENST00000393952 MUC16Q8WXI7 14507 aa2.66□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 10.2 ms