RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 A0A1B0GU33 70 aa5.11□□□□□ -1.59
CHMP3-202ENST00000393773 SEC61GP60059 68 aa5.11□□□□□ -1.59
CHMP3-202ENST00000393773 TNP1P09430 55 aa5.05□□□□□ -1.6
CHMP3-202ENST00000393773 KRTAP12-4P60329 112 aa5□□□□□ -1.61
CHMP3-202ENST00000393773 SERP2Q8N6R1 65 aa5□□□□□ -1.61
CHMP3-202ENST00000393773 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
CHMP3-202ENST00000393773 SYNE1Q8NF91 8797 aaKnown RBP4.98□□□□□ -1.61
CHMP3-202ENST00000393773 A8MU10 97 aa4.97□□□□□ -1.61
CHMP3-202ENST00000393773 PCP4P48539 62 aa4.96□□□□□ -1.62
CHMP3-202ENST00000393773 SMIM26A0A096LP01 95 aa4.95□□□□□ -1.62
CHMP3-202ENST00000393773 LOC100996750A0A140TA64 210 aa4.91□□□□□ -1.62
CHMP3-202ENST00000393773 AHNAKQ09666 5890 aaKnown RBP4.85□□□□□ -1.63
CHMP3-202ENST00000393773 KRTAP4-11Q9BYQ6 195 aa4.84□□□□□ -1.63
CHMP3-202ENST00000393773 A0A1B0GU69 56 aa4.83□□□□□ -1.64
CHMP3-202ENST00000393773 COX7CP15954 63 aa4.82□□□□□ -1.64
CHMP3-202ENST00000393773 MUC5ACP98088 5654 aa4.8□□□□□ -1.64
CHMP3-202ENST00000393773 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
CHMP3-202ENST00000393773 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
CHMP3-202ENST00000393773 ANAPC13Q9BS18 74 aa4.77□□□□□ -1.65
CHMP3-202ENST00000393773 H7BZZ5 65 aa4.74□□□□□ -1.65
CHMP3-202ENST00000393773 KRTAP5-8O75690 187 aa4.71□□□□□ -1.66
CHMP3-202ENST00000393773 KRTAP19-4Q3LI73 84 aa4.64□□□□□ -1.67
CHMP3-202ENST00000393773 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
CHMP3-202ENST00000393773 CCDC179H3BU77 68 aa4.63□□□□□ -1.67
CHMP3-202ENST00000393773 KRTAP6-1Q3LI64 71 aa4.63□□□□□ -1.67
CHMP3-202ENST00000393773 MT1AP04731 61 aa4.62□□□□□ -1.67
CHMP3-202ENST00000393773 PRR15LQ9BU68 103 aa4.61□□□□□ -1.67
CHMP3-202ENST00000393773 ATP5EP56381 51 aaPredicted RBP4.58□□□□□ -1.68
CHMP3-202ENST00000393773 KRTAP25-1Q3LHN0 102 aa4.58□□□□□ -1.68
CHMP3-202ENST00000393773 OBSCNQ5VST9 7968 aa4.55□□□□□ -1.68
CHMP3-202ENST00000393773 LCE3CQ5T5A8 94 aa4.55□□□□□ -1.68
CHMP3-202ENST00000393773 KRTAP15-1Q3LI76 137 aa4.52□□□□□ -1.69
CHMP3-202ENST00000393773 TMEM258P61165 79 aa4.5□□□□□ -1.69
CHMP3-202ENST00000393773 KRTAP6-2Q3LI66 62 aa4.49□□□□□ -1.69
CHMP3-202ENST00000393773 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
CHMP3-202ENST00000393773 KRTAP9-4Q9BYQ2 154 aa4.48□□□□□ -1.69
CHMP3-202ENST00000393773 LINC01558Q9Y6Z2 57 aa4.45□□□□□ -1.7
CHMP3-202ENST00000393773 RPS28P62857 69 aaKnown RBP4.44□□□□□ -1.7
CHMP3-202ENST00000393773 UQCR11O14957 56 aa4.4□□□□□ -1.71
CHMP3-202ENST00000393773 KRTAP23-1A1A580 65 aa4.38□□□□□ -1.71
CHMP3-202ENST00000393773 KRTAP9-6A8MVA2 160 aa4.37□□□□□ -1.71
CHMP3-202ENST00000393773 KRTAP5-1Q6L8H4 278 aa4.34□□□□□ -1.71
CHMP3-202ENST00000393773 K7ERS5 55 aa4.32□□□□□ -1.72
CHMP3-202ENST00000393773 MIR22HGQ0VDD5 57 aa4.28□□□□□ -1.72
CHMP3-202ENST00000393773 V9GYY9 64 aa4.25□□□□□ -1.73
CHMP3-202ENST00000393773 MT3P25713 68 aa4.21□□□□□ -1.74
CHMP3-202ENST00000393773 PSPHP1O15172 72 aa4.16□□□□□ -1.74
CHMP3-202ENST00000393773 Q1T7F1 81 aa4.15□□□□□ -1.75
CHMP3-202ENST00000393773 A6NED7 52 aa4.07□□□□□ -1.76
CHMP3-202ENST00000393773 PRO0628Q9UI54 55 aa4.02□□□□□ -1.77
CHMP3-202ENST00000393773 CDC42SE1Q9NRR8 79 aa4.01□□□□□ -1.77
CHMP3-202ENST00000393773 H3BS24 57 aa4□□□□□ -1.77
CHMP3-202ENST00000393773 BRK1Q8WUW1 75 aa4□□□□□ -1.77
CHMP3-202ENST00000393773 LCE1EQ5T753 118 aa3.97□□□□□ -1.77
CHMP3-202ENST00000393773 ROMO1P60602 79 aa3.91□□□□□ -1.78
CHMP3-202ENST00000393773 KRTAP4-2Q9BYR5 136 aa3.84□□□□□ -1.79
CHMP3-202ENST00000393773 PMAIP1Q13794 54 aa3.79□□□□□ -1.8
CHMP3-202ENST00000393773 LCE1BQ5T7P3 118 aa3.76□□□□□ -1.81
CHMP3-202ENST00000393773 LCE1CQ5T751 118 aa3.7□□□□□ -1.82
CHMP3-202ENST00000393773 KTN1-AS1Q86SY8 53 aa3.7□□□□□ -1.82
CHMP3-202ENST00000393773 A0A0A0MQY5 61 aa3.62□□□□□ -1.83
CHMP3-202ENST00000393773 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
CHMP3-202ENST00000393773 PRAC1Q96KF2 57 aa3.5□□□□□ -1.85
CHMP3-202ENST00000393773 KRTAP5-11Q6L8G4 156 aa3.45□□□□□ -1.86
CHMP3-202ENST00000393773 LCE1FQ5T754 118 aa3.37□□□□□ -1.87
CHMP3-202ENST00000393773 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
CHMP3-202ENST00000393773 PHGR1C9JFL3 82 aa3.24□□□□□ -1.89
CHMP3-202ENST00000393773 LCE3DQ9BYE3 92 aa3.18□□□□□ -1.9
CHMP3-202ENST00000393773 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
CHMP3-202ENST00000393773 LCE3EQ5T5B0 92 aa2.92□□□□□ -1.94
CHMP3-202ENST00000393773 NDUFAF8A1L188 74 aa2.89□□□□□ -1.95
CHMP3-202ENST00000393773 LUZP6Q538Z0 58 aa2.88□□□□□ -1.95
CHMP3-202ENST00000393773 KRTAP4-4Q9BYR3 166 aa2.84□□□□□ -1.95
CHMP3-202ENST00000393773 MUC19Q7Z5P9 8384 aa2.83□□□□□ -1.96
CHMP3-202ENST00000393773 KRTAP21-1Q3LI58 79 aa2.46□□□□□ -2.02
CHMP3-202ENST00000393773 INE1O15225 51 aa2.44□□□□□ -2.02
CHMP3-202ENST00000393773 PRM1P04553 51 aa1.98□□□□□ -2.09
CHMP3-202ENST00000393773 MUC16Q8WXI7 14507 aa1.96□□□□□ -2.1
Retrieved 78 of 20,778 RNA–protein pairs in 9.6 ms