RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 MT1GP13640 62 aa7.58□□□□□ -1.2
HMGA2-203ENST00000393578 MUC12Q9UKN1 5478 aa7.58□□□□□ -1.2
HMGA2-203ENST00000393578 KRTAP9-6A0A140TA67 174 aa7.53□□□□□ -1.2
HMGA2-203ENST00000393578 KRTAP9-6A8MVA2 160 aa7.51□□□□□ -1.21
HMGA2-203ENST00000393578 KRTAP5-9P26371 169 aa7.5□□□□□ -1.21
HMGA2-203ENST00000393578 MT1MQ8N339 61 aa7.5□□□□□ -1.21
HMGA2-203ENST00000393578 LCE5AQ5TCM9 118 aa7.46□□□□□ -1.21
HMGA2-203ENST00000393578 SYNE2Q8WXH0 6885 aaKnown RBP7.45□□□□□ -1.22
HMGA2-203ENST00000393578 H3BS24 57 aa7.44□□□□□ -1.22
HMGA2-203ENST00000393578 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.4□□□□□ -1.22
HMGA2-203ENST00000393578 KRTAP4-3Q9BYR4 195 aa7.38□□□□□ -1.23
HMGA2-203ENST00000393578 LCE1AQ5T7P2 110 aa7.29□□□□□ -1.24
HMGA2-203ENST00000393578 KRTAP6-3Q3LI67 103 aa7.27□□□□□ -1.25
HMGA2-203ENST00000393578 MDN1Q9NU22 5596 aa7.22□□□□□ -1.25
HMGA2-203ENST00000393578 SPRR2EP22531 72 aa7.2□□□□□ -1.26
HMGA2-203ENST00000393578 SPRR2BP35325 72 aa7.2□□□□□ -1.26
HMGA2-203ENST00000393578 SPRR2AP35326 72 aa7.2□□□□□ -1.26
HMGA2-203ENST00000393578 LOC100996750A0A140TA64 210 aa7.18□□□□□ -1.26
HMGA2-203ENST00000393578 A0A0A0MQY5 61 aa7.11□□□□□ -1.27
HMGA2-203ENST00000393578 KRTAP2-3P0C7H8 128 aa7.04□□□□□ -1.28
HMGA2-203ENST00000393578 KRTAP2-4Q9BYR9 128 aa7.04□□□□□ -1.28
HMGA2-203ENST00000393578 KRTAP2-1Q9BYU5 128 aa7.04□□□□□ -1.28
HMGA2-203ENST00000393578 DSTQ03001 7570 aaKnown RBP7.04□□□□□ -1.28
HMGA2-203ENST00000393578 KRTAP9-7A8MTY7 169 aa6.93□□□□□ -1.3
HMGA2-203ENST00000393578 SPRR2DP22532 72 aa6.92□□□□□ -1.3
HMGA2-203ENST00000393578 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
HMGA2-203ENST00000393578 KRTAP5-5Q701N2 237 aaPredicted RBP6.74□□□□□ -1.33
HMGA2-203ENST00000393578 NEBP20929 6669 aa6.68□□□□□ -1.34
HMGA2-203ENST00000393578 MT1AP04731 61 aa6.67□□□□□ -1.34
HMGA2-203ENST00000393578 LCE3BQ5TA77 95 aa6.64□□□□□ -1.35
HMGA2-203ENST00000393578 INE1O15225 51 aa6.62□□□□□ -1.35
HMGA2-203ENST00000393578 KRTAP6-1Q3LI64 71 aa6.62□□□□□ -1.35
HMGA2-203ENST00000393578 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
HMGA2-203ENST00000393578 SYNE1Q8NF91 8797 aaKnown RBP6.32□□□□□ -1.4
HMGA2-203ENST00000393578 KRTAP5-4Q6L8H1 288 aa6.31□□□□□ -1.4
HMGA2-203ENST00000393578 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
HMGA2-203ENST00000393578 KRTAP2-2Q9BYT5 123 aa6.19□□□□□ -1.42
HMGA2-203ENST00000393578 KRTAP4-9Q9BYQ8 210 aa6.17□□□□□ -1.42
HMGA2-203ENST00000393578 KRTAP20-1Q3LI63 56 aa6.15□□□□□ -1.43
HMGA2-203ENST00000393578 LCE4AQ5TA78 99 aa6.13□□□□□ -1.43
HMGA2-203ENST00000393578 KRTAP6-2Q3LI66 62 aa6.06□□□□□ -1.44
HMGA2-203ENST00000393578 MT3P25713 68 aa6.04□□□□□ -1.44
HMGA2-203ENST00000393578 MT4P47944 62 aa6.02□□□□□ -1.45
HMGA2-203ENST00000393578 LCE3DQ9BYE3 92 aa5.99□□□□□ -1.45
HMGA2-203ENST00000393578 KRTAP20-2Q3LI61 65 aa5.89□□□□□ -1.47
HMGA2-203ENST00000393578 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
HMGA2-203ENST00000393578 LCE3EQ5T5B0 92 aa5.84□□□□□ -1.47
HMGA2-203ENST00000393578 HMCN1Q96RW7 5635 aa5.79□□□□□ -1.48
HMGA2-203ENST00000393578 KRTAP5-2Q701N4 177 aa5.77□□□□□ -1.49
HMGA2-203ENST00000393578 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
HMGA2-203ENST00000393578 OBSCNQ5VST9 7968 aa5.5□□□□□ -1.53
HMGA2-203ENST00000393578 KRTAP9-9Q9BYP9 154 aa5.49□□□□□ -1.53
HMGA2-203ENST00000393578 KRTAP4-12Q9BQ66 201 aa5.32□□□□□ -1.56
HMGA2-203ENST00000393578 KRTAP4-2Q9BYR5 136 aa5.25□□□□□ -1.57
HMGA2-203ENST00000393578 PRM1P04553 51 aa5.21□□□□□ -1.58
HMGA2-203ENST00000393578 LCE1EQ5T753 118 aa5.18□□□□□ -1.58
HMGA2-203ENST00000393578 KRTAP4-11Q9BYQ6 195 aa5.06□□□□□ -1.6
HMGA2-203ENST00000393578 AHNAK2Q8IVF2 5795 aa5.04□□□□□ -1.6
HMGA2-203ENST00000393578 KRTAP5-1Q6L8H4 278 aa4.96□□□□□ -1.61
HMGA2-203ENST00000393578 KRTAP5-10Q6L8G5 202 aa4.89□□□□□ -1.63
HMGA2-203ENST00000393578 KRTAP5-8O75690 187 aa4.88□□□□□ -1.63
HMGA2-203ENST00000393578 LCE1BQ5T7P3 118 aa4.87□□□□□ -1.63
HMGA2-203ENST00000393578 MUC5ACP98088 5654 aa4.87□□□□□ -1.63
HMGA2-203ENST00000393578 LCE1CQ5T751 118 aa4.84□□□□□ -1.63
HMGA2-203ENST00000393578 KRTAP5-7Q6L8G8 165 aa4.75□□□□□ -1.65
HMGA2-203ENST00000393578 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.55□□□□□ -1.68
HMGA2-203ENST00000393578 GPR98Q8WXG9 6306 aa4.36□□□□□ -1.71
HMGA2-203ENST00000393578 KRTAP21-2Q3LI59 83 aa4.33□□□□□ -1.72
HMGA2-203ENST00000393578 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
HMGA2-203ENST00000393578 MUC5BQ9HC84 5762 aaPredicted RBP4.13□□□□□ -1.75
HMGA2-203ENST00000393578 KRTAP4-4Q9BYR3 166 aa3.83□□□□□ -1.8
HMGA2-203ENST00000393578 LCE1FQ5T754 118 aa3.76□□□□□ -1.81
HMGA2-203ENST00000393578 AHNAKQ09666 5890 aaKnown RBP3.67□□□□□ -1.82
HMGA2-203ENST00000393578 PHGR1C9JFL3 82 aa3.65□□□□□ -1.83
HMGA2-203ENST00000393578 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
HMGA2-203ENST00000393578 KRTAP21-1Q3LI58 79 aa3.23□□□□□ -1.89
HMGA2-203ENST00000393578 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 10.2 ms