RNA–Protein interactions for RNA: ENST00000392496.3

SPHK1-202, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-202ENST00000392496 KRTAP19-4Q3LI73 84 aa7.61□□□□□ -1.19
SPHK1-202ENST00000392496 LCE3CQ5T5A8 94 aa7.59□□□□□ -1.19
SPHK1-202ENST00000392496 SPRR2FQ96RM1 72 aa7.59□□□□□ -1.2
SPHK1-202ENST00000392496 MT1LQ93083 61 aa7.58□□□□□ -1.2
SPHK1-202ENST00000392496 MUC12Q9UKN1 5478 aa7.4□□□□□ -1.22
SPHK1-202ENST00000392496 KRTAP19-3Q7Z4W3 81 aa7.36□□□□□ -1.23
SPHK1-202ENST00000392496 KRTAP4-7Q9BYR0 210 aa7.35□□□□□ -1.23
SPHK1-202ENST00000392496 SPRR2EP22531 72 aa7.33□□□□□ -1.24
SPHK1-202ENST00000392496 SPRR2BP35325 72 aa7.33□□□□□ -1.24
SPHK1-202ENST00000392496 SPRR2AP35326 72 aa7.33□□□□□ -1.24
SPHK1-202ENST00000392496 MT1GP13640 62 aa7.31□□□□□ -1.24
SPHK1-202ENST00000392496 MDN1Q9NU22 5596 aa7.31□□□□□ -1.24
SPHK1-202ENST00000392496 LCE1AQ5T7P2 110 aa7.25□□□□□ -1.25
SPHK1-202ENST00000392496 MT1MQ8N339 61 aa7.23□□□□□ -1.25
SPHK1-202ENST00000392496 NEBP20929 6669 aa7.21□□□□□ -1.26
SPHK1-202ENST00000392496 LCE5AQ5TCM9 118 aa7.2□□□□□ -1.26
SPHK1-202ENST00000392496 KRTAP9-6A8MVA2 160 aa7.18□□□□□ -1.26
SPHK1-202ENST00000392496 SPRR2DP22532 72 aa7.09□□□□□ -1.27
SPHK1-202ENST00000392496 KRTAP4-3Q9BYR4 195 aa7.09□□□□□ -1.27
SPHK1-202ENST00000392496 H3BS24 57 aa6.99□□□□□ -1.29
SPHK1-202ENST00000392496 KRTAP20-1Q3LI63 56 aa6.94□□□□□ -1.3
SPHK1-202ENST00000392496 KRTAP2-3P0C7H8 128 aa6.92□□□□□ -1.3
SPHK1-202ENST00000392496 KRTAP2-4Q9BYR9 128 aa6.92□□□□□ -1.3
SPHK1-202ENST00000392496 LOC100996750A0A140TA64 210 aa6.89□□□□□ -1.31
SPHK1-202ENST00000392496 LCE3BQ5TA77 95 aa6.84□□□□□ -1.31
SPHK1-202ENST00000392496 A0A0A0MQY5 61 aa6.74□□□□□ -1.33
SPHK1-202ENST00000392496 KRTAP2-2Q9BYT5 123 aa6.74□□□□□ -1.33
SPHK1-202ENST00000392496 KRTAP2-1Q9BYU5 128 aa6.74□□□□□ -1.33
SPHK1-202ENST00000392496 DSTQ03001 7570 aaKnown RBP6.74□□□□□ -1.33
SPHK1-202ENST00000392496 KRTAP5-5Q701N2 237 aaPredicted RBP6.52□□□□□ -1.37
SPHK1-202ENST00000392496 MT1AP04731 61 aa6.44□□□□□ -1.38
SPHK1-202ENST00000392496 KRTAP6-1Q3LI64 71 aa6.37□□□□□ -1.39
SPHK1-202ENST00000392496 LCE4AQ5TA78 99 aa6.31□□□□□ -1.4
SPHK1-202ENST00000392496 INE1O15225 51 aa6.31□□□□□ -1.4
SPHK1-202ENST00000392496 KRTAP5-4Q6L8H1 288 aa6.22□□□□□ -1.41
SPHK1-202ENST00000392496 KRTAP4-9Q9BYQ8 210 aa6.15□□□□□ -1.43
SPHK1-202ENST00000392496 MT4P47944 62 aa6.13□□□□□ -1.43
SPHK1-202ENST00000392496 SYNE1Q8NF91 8797 aaKnown RBP6.13□□□□□ -1.43
SPHK1-202ENST00000392496 KRTAP9-4Q9BYQ2 154 aa6.11□□□□□ -1.43
SPHK1-202ENST00000392496 KRTAP12-4P60329 112 aa6.09□□□□□ -1.43
SPHK1-202ENST00000392496 LCE1DQ5T752 114 aa6.09□□□□□ -1.43
SPHK1-202ENST00000392496 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.46
SPHK1-202ENST00000392496 HMCN1Q96RW7 5635 aa5.95□□□□□ -1.46
SPHK1-202ENST00000392496 KRTAP20-2Q3LI61 65 aa5.85□□□□□ -1.47
SPHK1-202ENST00000392496 KRTAP6-2Q3LI66 62 aa5.83□□□□□ -1.48
SPHK1-202ENST00000392496 MT3P25713 68 aa5.83□□□□□ -1.48
SPHK1-202ENST00000392496 LCE3DQ9BYE3 92 aa5.73□□□□□ -1.49
SPHK1-202ENST00000392496 KRTAP5-3Q6L8H2 238 aa5.62□□□□□ -1.51
SPHK1-202ENST00000392496 LCE3EQ5T5B0 92 aa5.61□□□□□ -1.51
SPHK1-202ENST00000392496 KRTAP5-2Q701N4 177 aa5.59□□□□□ -1.51
SPHK1-202ENST00000392496 AHNAK2Q8IVF2 5795 aa5.47□□□□□ -1.53
SPHK1-202ENST00000392496 GPR98Q8WXG9 6306 aa5.38□□□□□ -1.55
SPHK1-202ENST00000392496 KRTAP5-10Q6L8G5 202 aa5.33□□□□□ -1.56
SPHK1-202ENST00000392496 OBSCNQ5VST9 7968 aa5.26□□□□□ -1.57
SPHK1-202ENST00000392496 KRTAP4-11Q9BYQ6 195 aa5.22□□□□□ -1.57
SPHK1-202ENST00000392496 KRTAP5-7Q6L8G8 165 aa5.06□□□□□ -1.6
SPHK1-202ENST00000392496 LCE1EQ5T753 118 aa5.01□□□□□ -1.61
SPHK1-202ENST00000392496 KRTAP5-8O75690 187 aa4.99□□□□□ -1.61
SPHK1-202ENST00000392496 PRM1P04553 51 aa4.97□□□□□ -1.61
SPHK1-202ENST00000392496 KRTAP5-1Q6L8H4 278 aa4.86□□□□□ -1.63
SPHK1-202ENST00000392496 KRTAP9-9Q9BYP9 154 aa4.73□□□□□ -1.65
SPHK1-202ENST00000392496 LCE1BQ5T7P3 118 aa4.69□□□□□ -1.66
SPHK1-202ENST00000392496 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
SPHK1-202ENST00000392496 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
SPHK1-202ENST00000392496 KRTAP4-2Q9BYR5 136 aa4.67□□□□□ -1.66
SPHK1-202ENST00000392496 MUC5BQ9HC84 5762 aaPredicted RBP4.46□□□□□ -1.7
SPHK1-202ENST00000392496 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.4□□□□□ -1.7
SPHK1-202ENST00000392496 AHNAKQ09666 5890 aaKnown RBP4.32□□□□□ -1.72
SPHK1-202ENST00000392496 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
SPHK1-202ENST00000392496 KRTAP5-11Q6L8G4 156 aa4.11□□□□□ -1.75
SPHK1-202ENST00000392496 KRTAP4-12Q9BQ66 201 aa3.91□□□□□ -1.78
SPHK1-202ENST00000392496 LCE1FQ5T754 118 aa3.88□□□□□ -1.79
SPHK1-202ENST00000392496 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
SPHK1-202ENST00000392496 PHGR1C9JFL3 82 aa3.52□□□□□ -1.85
SPHK1-202ENST00000392496 MUC19Q7Z5P9 8384 aa3.12□□□□□ -1.91
SPHK1-202ENST00000392496 KRTAP21-1Q3LI58 79 aa3.08□□□□□ -1.92
SPHK1-202ENST00000392496 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 74.6 ms