RNA–Protein interactions for RNA: ENST00000392346.6

CCDC57-205, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC57, Length 2,964 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-205ENST00000392346 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
CCDC57-205ENST00000392346 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
CCDC57-205ENST00000392346 KRTAP19-5Q3LI72 72 aa4.32□□□□□ -1.72
CCDC57-205ENST00000392346 LCE1AQ5T7P2 110 aa4.29□□□□□ -1.72
CCDC57-205ENST00000392346 KRTAP6-3Q3LI67 103 aa4.26□□□□□ -1.73
CCDC57-205ENST00000392346 KRTAP4-7Q9BYR0 210 aa4.26□□□□□ -1.73
CCDC57-205ENST00000392346 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
CCDC57-205ENST00000392346 LCE3CQ5T5A8 94 aa4.16□□□□□ -1.74
CCDC57-205ENST00000392346 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
CCDC57-205ENST00000392346 LCE1DQ5T752 114 aa4.11□□□□□ -1.75
CCDC57-205ENST00000392346 DSTQ03001 7570 aaKnown RBP4.11□□□□□ -1.75
CCDC57-205ENST00000392346 KRTAP9-4Q9BYQ2 154 aa4.09□□□□□ -1.75
CCDC57-205ENST00000392346 LOC100996750A0A140TA64 210 aa4.06□□□□□ -1.76
CCDC57-205ENST00000392346 KRTAP19-7Q3SYF9 63 aa4.06□□□□□ -1.76
CCDC57-205ENST00000392346 KRTAP4-6Q9BYQ5 205 aa4.06□□□□□ -1.76
CCDC57-205ENST00000392346 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
CCDC57-205ENST00000392346 NEBP20929 6669 aa4.01□□□□□ -1.77
CCDC57-205ENST00000392346 SPRR2FQ96RM1 72 aa3.99□□□□□ -1.77
CCDC57-205ENST00000392346 KRTAP20-1Q3LI63 56 aa3.98□□□□□ -1.77
CCDC57-205ENST00000392346 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
CCDC57-205ENST00000392346 MDN1Q9NU22 5596 aa3.93□□□□□ -1.78
CCDC57-205ENST00000392346 SPRR2EP22531 72 aa3.92□□□□□ -1.78
CCDC57-205ENST00000392346 SPRR2BP35325 72 aa3.92□□□□□ -1.78
CCDC57-205ENST00000392346 SPRR2AP35326 72 aa3.92□□□□□ -1.78
CCDC57-205ENST00000392346 MT1LQ93083 61 aa3.91□□□□□ -1.78
CCDC57-205ENST00000392346 SYNE1Q8NF91 8797 aaKnown RBP3.91□□□□□ -1.78
CCDC57-205ENST00000392346 LCE3EQ5T5B0 92 aa3.91□□□□□ -1.78
CCDC57-205ENST00000392346 MT1EP04732 61 aa3.9□□□□□ -1.79
CCDC57-205ENST00000392346 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.79
CCDC57-205ENST00000392346 KRTAP2-3P0C7H8 128 aa3.88□□□□□ -1.79
CCDC57-205ENST00000392346 KRTAP2-4Q9BYR9 128 aa3.88□□□□□ -1.79
CCDC57-205ENST00000392346 KRTAP2-1Q9BYU5 128 aa3.88□□□□□ -1.79
CCDC57-205ENST00000392346 MT1GP13640 62 aa3.83□□□□□ -1.8
CCDC57-205ENST00000392346 LCE4AQ5TA78 99 aa3.82□□□□□ -1.8
CCDC57-205ENST00000392346 OBSCNQ5VST9 7968 aa3.8□□□□□ -1.8
CCDC57-205ENST00000392346 SPRR2DP22532 72 aa3.79□□□□□ -1.8
CCDC57-205ENST00000392346 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
CCDC57-205ENST00000392346 KRTAP19-4Q3LI73 84 aa3.71□□□□□ -1.82
CCDC57-205ENST00000392346 LCE3DQ9BYE3 92 aa3.71□□□□□ -1.82
CCDC57-205ENST00000392346 LCE3BQ5TA77 95 aa3.68□□□□□ -1.82
CCDC57-205ENST00000392346 KRTAP4-9Q9BYQ8 210 aa3.66□□□□□ -1.82
CCDC57-205ENST00000392346 MT1MQ8N339 61 aa3.65□□□□□ -1.83
CCDC57-205ENST00000392346 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
CCDC57-205ENST00000392346 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.84
CCDC57-205ENST00000392346 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
CCDC57-205ENST00000392346 MT4P47944 62 aa3.32□□□□□ -1.88
CCDC57-205ENST00000392346 PRM1P04553 51 aa3.3□□□□□ -1.88
CCDC57-205ENST00000392346 GPR98Q8WXG9 6306 aa3.27□□□□□ -1.89
CCDC57-205ENST00000392346 MT3P25713 68 aa3.24□□□□□ -1.89
CCDC57-205ENST00000392346 KRTAP4-12Q9BQ66 201 aa3.23□□□□□ -1.89
CCDC57-205ENST00000392346 KRTAP5-4Q6L8H1 288 aa3.21□□□□□ -1.89
CCDC57-205ENST00000392346 KRTAP5-5Q701N2 237 aaPredicted RBP3.21□□□□□ -1.89
CCDC57-205ENST00000392346 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.9
CCDC57-205ENST00000392346 MT1AP04731 61 aa3.2□□□□□ -1.9
CCDC57-205ENST00000392346 KRTAP4-2Q9BYR5 136 aa3.13□□□□□ -1.91
CCDC57-205ENST00000392346 KRTAP5-3Q6L8H2 238 aa3.1□□□□□ -1.91
CCDC57-205ENST00000392346 KRTAP6-2Q3LI66 62 aa3.08□□□□□ -1.92
CCDC57-205ENST00000392346 KRTAP20-2Q3LI61 65 aa3.06□□□□□ -1.92
CCDC57-205ENST00000392346 KRTAP5-10Q6L8G5 202 aa3.06□□□□□ -1.92
CCDC57-205ENST00000392346 AHNAK2Q8IVF2 5795 aa3.06□□□□□ -1.92
CCDC57-205ENST00000392346 KRTAP5-7Q6L8G8 165 aa2.95□□□□□ -1.94
CCDC57-205ENST00000392346 KRTAP4-11Q9BYQ6 195 aa2.93□□□□□ -1.94
CCDC57-205ENST00000392346 KRTAP5-2Q701N4 177 aa2.8□□□□□ -1.96
CCDC57-205ENST00000392346 LCE1CQ5T751 118 aa2.79□□□□□ -1.96
CCDC57-205ENST00000392346 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
CCDC57-205ENST00000392346 KRTAP5-8O75690 187 aa2.69□□□□□ -1.98
CCDC57-205ENST00000392346 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
CCDC57-205ENST00000392346 MUC5BQ9HC84 5762 aaPredicted RBP2.55□□□□□ -2
CCDC57-205ENST00000392346 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
CCDC57-205ENST00000392346 AHNAKQ09666 5890 aaKnown RBP2.5□□□□□ -2.01
CCDC57-205ENST00000392346 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
CCDC57-205ENST00000392346 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.22□□□□□ -2.05
CCDC57-205ENST00000392346 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
CCDC57-205ENST00000392346 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
CCDC57-205ENST00000392346 KRTAP5-11Q6L8G4 156 aa2.05□□□□□ -2.08
CCDC57-205ENST00000392346 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
CCDC57-205ENST00000392346 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 13.4 ms