RNA–Protein interactions for RNA: ENST00000392114.6

VIL1-202, Transcript of villin 1, humanhuman

TSL 2 BASIC

Gene VIL1, Length 1,968 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIL1-202ENST00000392114 KRTAP5-9P26371 169 aa4.28□□□□□ -1.72
VIL1-202ENST00000392114 LCE3CQ5T5A8 94 aa4.27□□□□□ -1.73
VIL1-202ENST00000392114 SYNE2Q8WXH0 6885 aaKnown RBP4.27□□□□□ -1.73
VIL1-202ENST00000392114 SPRR5A0A1B0GTR4 108 aa4.25□□□□□ -1.73
VIL1-202ENST00000392114 MT1GP13640 62 aa4.24□□□□□ -1.73
VIL1-202ENST00000392114 KRTAP19-3Q7Z4W3 81 aa4.24□□□□□ -1.73
VIL1-202ENST00000392114 KRTAP6-3Q3LI67 103 aa4.23□□□□□ -1.73
VIL1-202ENST00000392114 LCE5AQ5TCM9 118 aa4.15□□□□□ -1.74
VIL1-202ENST00000392114 MT1MQ8N339 61 aa4.13□□□□□ -1.75
VIL1-202ENST00000392114 MUC12Q9UKN1 5478 aa4.12□□□□□ -1.75
VIL1-202ENST00000392114 SPRR2EP22531 72 aa4.11□□□□□ -1.75
VIL1-202ENST00000392114 SPRR2BP35325 72 aa4.11□□□□□ -1.75
VIL1-202ENST00000392114 SPRR2AP35326 72 aa4.11□□□□□ -1.75
VIL1-202ENST00000392114 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
VIL1-202ENST00000392114 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.76
VIL1-202ENST00000392114 KRTAP9-7A8MTY7 169 aa4.06□□□□□ -1.76
VIL1-202ENST00000392114 SPRR2DP22532 72 aa3.97□□□□□ -1.77
VIL1-202ENST00000392114 KRTAP4-3Q9BYR4 195 aa3.97□□□□□ -1.77
VIL1-202ENST00000392114 MDN1Q9NU22 5596 aa3.95□□□□□ -1.78
VIL1-202ENST00000392114 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
VIL1-202ENST00000392114 NEBP20929 6669 aa3.88□□□□□ -1.79
VIL1-202ENST00000392114 DSTQ03001 7570 aaKnown RBP3.85□□□□□ -1.79
VIL1-202ENST00000392114 LOC100996750A0A140TA64 210 aa3.84□□□□□ -1.79
VIL1-202ENST00000392114 LCE3BQ5TA77 95 aa3.81□□□□□ -1.8
VIL1-202ENST00000392114 INE1O15225 51 aa3.79□□□□□ -1.8
VIL1-202ENST00000392114 KRTAP2-3P0C7H8 128 aa3.72□□□□□ -1.81
VIL1-202ENST00000392114 KRTAP2-4Q9BYR9 128 aa3.72□□□□□ -1.81
VIL1-202ENST00000392114 KRTAP5-5Q701N2 237 aaPredicted RBP3.71□□□□□ -1.82
VIL1-202ENST00000392114 KRTAP2-1Q9BYU5 128 aa3.7□□□□□ -1.82
VIL1-202ENST00000392114 MT1AP04731 61 aa3.67□□□□□ -1.82
VIL1-202ENST00000392114 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
VIL1-202ENST00000392114 KRTAP20-1Q3LI63 56 aa3.63□□□□□ -1.83
VIL1-202ENST00000392114 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
VIL1-202ENST00000392114 KRTAP5-4Q6L8H1 288 aa3.56□□□□□ -1.84
VIL1-202ENST00000392114 LCE4AQ5TA78 99 aa3.56□□□□□ -1.84
VIL1-202ENST00000392114 KRTAP12-4P60329 112 aa3.54□□□□□ -1.84
VIL1-202ENST00000392114 KRTAP9-4Q9BYQ2 154 aa3.5□□□□□ -1.85
VIL1-202ENST00000392114 SYNE1Q8NF91 8797 aaKnown RBP3.46□□□□□ -1.86
VIL1-202ENST00000392114 MT4P47944 62 aa3.41□□□□□ -1.86
VIL1-202ENST00000392114 MT3P25713 68 aa3.37□□□□□ -1.87
VIL1-202ENST00000392114 KRTAP4-6Q9BYQ5 205 aa3.36□□□□□ -1.87
VIL1-202ENST00000392114 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
VIL1-202ENST00000392114 KRTAP4-9Q9BYQ8 210 aa3.35□□□□□ -1.87
VIL1-202ENST00000392114 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
VIL1-202ENST00000392114 KRTAP6-2Q3LI66 62 aa3.32□□□□□ -1.88
VIL1-202ENST00000392114 HMCN1Q96RW7 5635 aa3.23□□□□□ -1.89
VIL1-202ENST00000392114 LCE3DQ9BYE3 92 aa3.23□□□□□ -1.89
VIL1-202ENST00000392114 KRTAP5-2Q701N4 177 aa3.22□□□□□ -1.89
VIL1-202ENST00000392114 KRTAP5-3Q6L8H2 238 aa3.2□□□□□ -1.9
VIL1-202ENST00000392114 LCE3EQ5T5B0 92 aa3.14□□□□□ -1.91
VIL1-202ENST00000392114 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
VIL1-202ENST00000392114 OBSCNQ5VST9 7968 aa3.05□□□□□ -1.92
VIL1-202ENST00000392114 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
VIL1-202ENST00000392114 KRTAP4-11Q9BYQ6 195 aa2.9□□□□□ -1.95
VIL1-202ENST00000392114 KRTAP4-12Q9BQ66 201 aa2.83□□□□□ -1.96
VIL1-202ENST00000392114 AHNAK2Q8IVF2 5795 aa2.83□□□□□ -1.96
VIL1-202ENST00000392114 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.97
VIL1-202ENST00000392114 KRTAP5-1Q6L8H4 278 aa2.78□□□□□ -1.97
VIL1-202ENST00000392114 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
VIL1-202ENST00000392114 KRTAP9-9Q9BYP9 154 aa2.76□□□□□ -1.97
VIL1-202ENST00000392114 LCE1CQ5T751 118 aa2.72□□□□□ -1.97
VIL1-202ENST00000392114 LCE1BQ5T7P3 118 aa2.72□□□□□ -1.97
VIL1-202ENST00000392114 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
VIL1-202ENST00000392114 PRM1P04553 51 aa2.69□□□□□ -1.98
VIL1-202ENST00000392114 KRTAP4-2Q9BYR5 136 aa2.65□□□□□ -1.98
VIL1-202ENST00000392114 MUC5ACP98088 5654 aa2.59□□□□□ -1.99
VIL1-202ENST00000392114 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.54□□□□□ -2
VIL1-202ENST00000392114 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
VIL1-202ENST00000392114 KRTAP5-11Q6L8G4 156 aa2.39□□□□□ -2.03
VIL1-202ENST00000392114 KRTAP21-2Q3LI59 83 aa2.35□□□□□ -2.03
VIL1-202ENST00000392114 MUC5BQ9HC84 5762 aaPredicted RBP2.31□□□□□ -2.04
VIL1-202ENST00000392114 LCE1FQ5T754 118 aa2.21□□□□□ -2.05
VIL1-202ENST00000392114 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
VIL1-202ENST00000392114 PHGR1C9JFL3 82 aa2.04□□□□□ -2.08
VIL1-202ENST00000392114 MUC19Q7Z5P9 8384 aa1.77□□□□□ -2.13
VIL1-202ENST00000392114 KRTAP21-1Q3LI58 79 aa1.66□□□□□ -2.14
VIL1-202ENST00000392114 MUC16Q8WXI7 14507 aa1.3□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 102.5 ms