RNA–Protein interactions for RNA: ENST00000381108.3

FAM239A-201, Transcript of family with sequence similarity 239 member A, humanhuman

TSL 2 BASIC

Gene FAM239A, Length 2,198 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM239A-201ENST00000381108 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
FAM239A-201ENST00000381108 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
FAM239A-201ENST00000381108 MT3P25713 68 aa4.26□□□□□ -1.73
FAM239A-201ENST00000381108 FCGBPQ9Y6R7 5405 aaPredicted RBP4.23□□□□□ -1.73
FAM239A-201ENST00000381108 KRTAP8-1Q8IUC2 63 aa4.21□□□□□ -1.73
FAM239A-201ENST00000381108 KRTAP4-7Q9BYR0 210 aa4.18□□□□□ -1.74
FAM239A-201ENST00000381108 KRTAP12-3P60328 96 aa4.13□□□□□ -1.75
FAM239A-201ENST00000381108 KRTAP19-5Q3LI72 72 aa4.11□□□□□ -1.75
FAM239A-201ENST00000381108 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
FAM239A-201ENST00000381108 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
FAM239A-201ENST00000381108 MACF1Q9UPN3 7388 aaKnown RBP4.06□□□□□ -1.76
FAM239A-201ENST00000381108 KRTAP19-7Q3SYF9 63 aa4.03□□□□□ -1.76
FAM239A-201ENST00000381108 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
FAM239A-201ENST00000381108 SYNE2Q8WXH0 6885 aaKnown RBP4□□□□□ -1.77
FAM239A-201ENST00000381108 KRTAP4-9Q9BYQ8 210 aa4□□□□□ -1.77
FAM239A-201ENST00000381108 MUC12Q9UKN1 5478 aa3.95□□□□□ -1.78
FAM239A-201ENST00000381108 MT1EP04732 61 aa3.95□□□□□ -1.78
FAM239A-201ENST00000381108 KRTAP4-2Q9BYR5 136 aa3.95□□□□□ -1.78
FAM239A-201ENST00000381108 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.79
FAM239A-201ENST00000381108 GPR98Q8WXG9 6306 aa3.89□□□□□ -1.79
FAM239A-201ENST00000381108 MT1LQ93083 61 aa3.88□□□□□ -1.79
FAM239A-201ENST00000381108 KRTAP2-2Q9BYT5 123 aa3.86□□□□□ -1.79
FAM239A-201ENST00000381108 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
FAM239A-201ENST00000381108 KRTAP5-3Q6L8H2 238 aa3.85□□□□□ -1.79
FAM239A-201ENST00000381108 MDN1Q9NU22 5596 aa3.82□□□□□ -1.8
FAM239A-201ENST00000381108 KRTAP19-3Q7Z4W3 81 aa3.79□□□□□ -1.8
FAM239A-201ENST00000381108 INE1O15225 51 aa3.78□□□□□ -1.8
FAM239A-201ENST00000381108 KRTAP5-9P26371 169 aa3.77□□□□□ -1.81
FAM239A-201ENST00000381108 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
FAM239A-201ENST00000381108 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
FAM239A-201ENST00000381108 MT1GP13640 62 aa3.73□□□□□ -1.81
FAM239A-201ENST00000381108 MT1MQ8N339 61 aa3.72□□□□□ -1.81
FAM239A-201ENST00000381108 KRTAP4-3Q9BYR4 195 aa3.72□□□□□ -1.81
FAM239A-201ENST00000381108 DSTQ03001 7570 aaKnown RBP3.68□□□□□ -1.82
FAM239A-201ENST00000381108 KRTAP9-6A8MVA2 160 aa3.68□□□□□ -1.82
FAM239A-201ENST00000381108 SPRR2EP22531 72 aa3.68□□□□□ -1.82
FAM239A-201ENST00000381108 SPRR2BP35325 72 aa3.68□□□□□ -1.82
FAM239A-201ENST00000381108 SPRR2AP35326 72 aa3.68□□□□□ -1.82
FAM239A-201ENST00000381108 KRTAP6-3Q3LI67 103 aa3.68□□□□□ -1.82
FAM239A-201ENST00000381108 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
FAM239A-201ENST00000381108 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
FAM239A-201ENST00000381108 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
FAM239A-201ENST00000381108 SPRR2DP22532 72 aa3.53□□□□□ -1.84
FAM239A-201ENST00000381108 NEBP20929 6669 aa3.49□□□□□ -1.85
FAM239A-201ENST00000381108 LCE3EQ5T5B0 92 aa3.41□□□□□ -1.86
FAM239A-201ENST00000381108 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
FAM239A-201ENST00000381108 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
FAM239A-201ENST00000381108 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
FAM239A-201ENST00000381108 MT1AP04731 61 aa3.27□□□□□ -1.89
FAM239A-201ENST00000381108 SYNE1Q8NF91 8797 aaKnown RBP3.24□□□□□ -1.89
FAM239A-201ENST00000381108 KRTAP20-1Q3LI63 56 aa3.17□□□□□ -1.9
FAM239A-201ENST00000381108 KRTAP5-4Q6L8H1 288 aa3.14□□□□□ -1.91
FAM239A-201ENST00000381108 MT4P47944 62 aa3.11□□□□□ -1.91
FAM239A-201ENST00000381108 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
FAM239A-201ENST00000381108 LCE1EQ5T753 118 aa3.1□□□□□ -1.91
FAM239A-201ENST00000381108 AHNAKQ09666 5890 aaKnown RBP3.09□□□□□ -1.92
FAM239A-201ENST00000381108 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
FAM239A-201ENST00000381108 KRTAP6-2Q3LI66 62 aa3.03□□□□□ -1.92
FAM239A-201ENST00000381108 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
FAM239A-201ENST00000381108 OBSCNQ5VST9 7968 aa2.94□□□□□ -1.94
FAM239A-201ENST00000381108 KRTAP5-2Q701N4 177 aa2.85□□□□□ -1.95
FAM239A-201ENST00000381108 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
FAM239A-201ENST00000381108 PRM1P04553 51 aa2.68□□□□□ -1.98
FAM239A-201ENST00000381108 AHNAK2Q8IVF2 5795 aa2.62□□□□□ -1.99
FAM239A-201ENST00000381108 KRTAP5-11Q6L8G4 156 aa2.55□□□□□ -2
FAM239A-201ENST00000381108 KRTAP5-1Q6L8H4 278 aa2.49□□□□□ -2.01
FAM239A-201ENST00000381108 LCE1BQ5T7P3 118 aa2.48□□□□□ -2.01
FAM239A-201ENST00000381108 MUC5ACP98088 5654 aa2.46□□□□□ -2.01
FAM239A-201ENST00000381108 KRTAP5-8O75690 187 aa2.46□□□□□ -2.02
FAM239A-201ENST00000381108 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
FAM239A-201ENST00000381108 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
FAM239A-201ENST00000381108 KRTAP5-7Q6L8G8 165 aa2.34□□□□□ -2.03
FAM239A-201ENST00000381108 KRTAP21-2Q3LI59 83 aa2.13□□□□□ -2.07
FAM239A-201ENST00000381108 MUC19Q7Z5P9 8384 aa1.9□□□□□ -2.11
FAM239A-201ENST00000381108 PHGR1C9JFL3 82 aa1.81□□□□□ -2.12
FAM239A-201ENST00000381108 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
FAM239A-201ENST00000381108 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 140 ms