RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 CHKB-CPT1BH3BT56 60 aa5.74□□□□□ -1.49
HMGN1-203ENST00000380748 LINC00643Q86TS7 51 aa5.73□□□□□ -1.49
HMGN1-203ENST00000380748 MUC5ACP98088 5654 aa5.72□□□□□ -1.49
HMGN1-203ENST00000380748 K7ERU9 68 aa5.72□□□□□ -1.49
HMGN1-203ENST00000380748 LCE3AQ5TA76 89 aa5.71□□□□□ -1.5
HMGN1-203ENST00000380748 MUC5BQ9HC84 5762 aaPredicted RBP5.7□□□□□ -1.5
HMGN1-203ENST00000380748 SPINT4Q6UDR6 99 aa5.66□□□□□ -1.5
HMGN1-203ENST00000380748 KRTAP12-1P59990 96 aa5.57□□□□□ -1.52
HMGN1-203ENST00000380748 SCGB1A1P11684 91 aa5.56□□□□□ -1.52
HMGN1-203ENST00000380748 SPATA8Q6RVD6 105 aa5.56□□□□□ -1.52
HMGN1-203ENST00000380748 KRTAP5-8O75690 187 aa5.52□□□□□ -1.53
HMGN1-203ENST00000380748 KRTAP12-3P60328 96 aa5.46□□□□□ -1.54
HMGN1-203ENST00000380748 TNP1P09430 55 aa5.45□□□□□ -1.54
HMGN1-203ENST00000380748 KRTAP5-2Q701N4 177 aa5.42□□□□□ -1.54
HMGN1-203ENST00000380748 SMIM20Q8N5G0 67 aa5.42□□□□□ -1.54
HMGN1-203ENST00000380748 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
HMGN1-203ENST00000380748 SVIPQ8NHG7 77 aa5.38□□□□□ -1.55
HMGN1-203ENST00000380748 A0A1B0GU33 70 aa5.36□□□□□ -1.55
HMGN1-203ENST00000380748 SERP1Q9Y6X1 66 aa5.36□□□□□ -1.55
HMGN1-203ENST00000380748 SEC61GP60059 68 aa5.35□□□□□ -1.55
HMGN1-203ENST00000380748 SNURFQ9Y675 71 aa5.3□□□□□ -1.56
HMGN1-203ENST00000380748 SERP2Q8N6R1 65 aa5.28□□□□□ -1.56
HMGN1-203ENST00000380748 SPANXA2-OT1Q8N9U9 137 aa5.28□□□□□ -1.56
HMGN1-203ENST00000380748 ANAPC13Q9BS18 74 aa5.27□□□□□ -1.57
HMGN1-203ENST00000380748 A8MU10 97 aa5.23□□□□□ -1.57
HMGN1-203ENST00000380748 COA5Q86WW8 74 aa5.22□□□□□ -1.57
HMGN1-203ENST00000380748 COX7CP15954 63 aa5.2□□□□□ -1.58
HMGN1-203ENST00000380748 KRTAP6-1Q3LI64 71 aa5.2□□□□□ -1.58
HMGN1-203ENST00000380748 SMIM26A0A096LP01 95 aa5.18□□□□□ -1.58
HMGN1-203ENST00000380748 MT1AP04731 61 aa5.16□□□□□ -1.58
HMGN1-203ENST00000380748 CCDC179H3BU77 68 aa5.12□□□□□ -1.59
HMGN1-203ENST00000380748 KRTAP6-2Q3LI66 62 aa5.1□□□□□ -1.59
HMGN1-203ENST00000380748 H7BZZ5 65 aa5.02□□□□□ -1.61
HMGN1-203ENST00000380748 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
HMGN1-203ENST00000380748 RPS28P62857 69 aaKnown RBP4.97□□□□□ -1.61
HMGN1-203ENST00000380748 ATP5EP56381 51 aaPredicted RBP4.96□□□□□ -1.62
HMGN1-203ENST00000380748 TMEM258P61165 79 aa4.96□□□□□ -1.62
HMGN1-203ENST00000380748 LCE3CQ5T5A8 94 aa4.96□□□□□ -1.62
HMGN1-203ENST00000380748 A0A1B0GU69 56 aa4.95□□□□□ -1.62
HMGN1-203ENST00000380748 KRTAP25-1Q3LHN0 102 aa4.94□□□□□ -1.62
HMGN1-203ENST00000380748 A0A0A0MQY5 61 aa4.8□□□□□ -1.64
HMGN1-203ENST00000380748 KRTAP9-6A8MVA2 160 aa4.75□□□□□ -1.65
HMGN1-203ENST00000380748 MT3P25713 68 aa4.75□□□□□ -1.65
HMGN1-203ENST00000380748 PRO0628Q9UI54 55 aa4.71□□□□□ -1.66
HMGN1-203ENST00000380748 PRR15LQ9BU68 103 aa4.68□□□□□ -1.66
HMGN1-203ENST00000380748 LINC01558Q9Y6Z2 57 aa4.64□□□□□ -1.67
HMGN1-203ENST00000380748 V9GYY9 64 aa4.64□□□□□ -1.67
HMGN1-203ENST00000380748 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
HMGN1-203ENST00000380748 Q1T7F1 81 aa4.57□□□□□ -1.68
HMGN1-203ENST00000380748 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
HMGN1-203ENST00000380748 LCE1EQ5T753 118 aa4.56□□□□□ -1.68
HMGN1-203ENST00000380748 UQCR11O14957 56 aa4.51□□□□□ -1.69
HMGN1-203ENST00000380748 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.48□□□□□ -1.69
HMGN1-203ENST00000380748 PSPHP1O15172 72 aa4.47□□□□□ -1.69
HMGN1-203ENST00000380748 PMAIP1Q13794 54 aa4.43□□□□□ -1.7
HMGN1-203ENST00000380748 MIR22HGQ0VDD5 57 aa4.41□□□□□ -1.7
HMGN1-203ENST00000380748 A6NED7 52 aa4.37□□□□□ -1.71
HMGN1-203ENST00000380748 K7ERS5 55 aa4.35□□□□□ -1.71
HMGN1-203ENST00000380748 LCE1BQ5T7P3 118 aa4.34□□□□□ -1.71
HMGN1-203ENST00000380748 KTN1-AS1Q86SY8 53 aa4.32□□□□□ -1.72
HMGN1-203ENST00000380748 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
HMGN1-203ENST00000380748 LCE1FQ5T754 118 aa4.23□□□□□ -1.73
HMGN1-203ENST00000380748 LCE1CQ5T751 118 aa4.18□□□□□ -1.74
HMGN1-203ENST00000380748 ROMO1P60602 79 aa4.04□□□□□ -1.76
HMGN1-203ENST00000380748 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
HMGN1-203ENST00000380748 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
HMGN1-203ENST00000380748 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
HMGN1-203ENST00000380748 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
HMGN1-203ENST00000380748 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
HMGN1-203ENST00000380748 KRTAP21-2Q3LI59 83 aa3.42□□□□□ -1.86
HMGN1-203ENST00000380748 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
HMGN1-203ENST00000380748 MUC19Q7Z5P9 8384 aa3.34□□□□□ -1.87
HMGN1-203ENST00000380748 LUZP6Q538Z0 58 aa3.24□□□□□ -1.89
HMGN1-203ENST00000380748 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
HMGN1-203ENST00000380748 INE1O15225 51 aa2.89□□□□□ -1.95
HMGN1-203ENST00000380748 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
HMGN1-203ENST00000380748 PRM1P04553 51 aa2.05□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms