RNA–Protein interactions for RNA: ENST00000380003.7

C9orf72-203, Transcript of chromosome 9 open reading frame 72, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf72, Length 3,200 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-203ENST00000380003 A8MU10 97 aa1.73□□□□□ -2.13
C9orf72-203ENST00000380003 KRTAP4-3Q9BYR4 195 aa1.73□□□□□ -2.13
C9orf72-203ENST00000380003 KRTAP19-5Q3LI72 72 aa1.73□□□□□ -2.13
C9orf72-203ENST00000380003 SERP2Q8N6R1 65 aa1.73□□□□□ -2.13
C9orf72-203ENST00000380003 MT1EP04732 61 aa1.72□□□□□ -2.13
C9orf72-203ENST00000380003 SMIM20Q8N5G0 67 aa1.72□□□□□ -2.13
C9orf72-203ENST00000380003 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
C9orf72-203ENST00000380003 KRTAP5-8O75690 187 aa1.71□□□□□ -2.14
C9orf72-203ENST00000380003 MT4P47944 62 aa1.71□□□□□ -2.14
C9orf72-203ENST00000380003 KRTAP19-3Q7Z4W3 81 aa1.71□□□□□ -2.14
C9orf72-203ENST00000380003 SYNE1Q8NF91 8797 aaKnown RBP1.7□□□□□ -2.14
C9orf72-203ENST00000380003 SPANXA2-OT1Q8N9U9 137 aa1.7□□□□□ -2.14
C9orf72-203ENST00000380003 A0A1B0GU33 70 aa1.7□□□□□ -2.14
C9orf72-203ENST00000380003 KRTAP12-1P59990 96 aa1.7□□□□□ -2.14
C9orf72-203ENST00000380003 SERP1Q9Y6X1 66 aa1.7□□□□□ -2.14
C9orf72-203ENST00000380003 H7BZZ5 65 aa1.68□□□□□ -2.14
C9orf72-203ENST00000380003 C10orf95Q9H7T3 257 aa1.68□□□□□ -2.14
C9orf72-203ENST00000380003 LCE3AQ5TA76 89 aa1.67□□□□□ -2.14
C9orf72-203ENST00000380003 COX7CP15954 63 aa1.66□□□□□ -2.14
C9orf72-203ENST00000380003 A0A1B0GU69 56 aa1.65□□□□□ -2.14
C9orf72-203ENST00000380003 PRO0628Q9UI54 55 aa1.65□□□□□ -2.14
C9orf72-203ENST00000380003 MT1MQ8N339 61 aa1.65□□□□□ -2.15
C9orf72-203ENST00000380003 MT1LQ93083 61 aa1.64□□□□□ -2.15
C9orf72-203ENST00000380003 MT1GP13640 62 aa1.64□□□□□ -2.15
C9orf72-203ENST00000380003 CCDC179H3BU77 68 aa1.63□□□□□ -2.15
C9orf72-203ENST00000380003 MT3P25713 68 aa1.62□□□□□ -2.15
C9orf72-203ENST00000380003 ANAPC13Q9BS18 74 aa1.62□□□□□ -2.15
C9orf72-203ENST00000380003 PP632Q6XCG6 107 aa1.61□□□□□ -2.15
C9orf72-203ENST00000380003 TNP1P09430 55 aa1.6□□□□□ -2.15
C9orf72-203ENST00000380003 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
C9orf72-203ENST00000380003 SMIM26A0A096LP01 95 aa1.59□□□□□ -2.16
C9orf72-203ENST00000380003 AHNAK2Q8IVF2 5795 aa1.58□□□□□ -2.16
C9orf72-203ENST00000380003 PMAIP1Q13794 54 aa1.58□□□□□ -2.16
C9orf72-203ENST00000380003 KRTAP12-3P60328 96 aa1.57□□□□□ -2.16
C9orf72-203ENST00000380003 KRTAP5-2Q701N4 177 aa1.56□□□□□ -2.16
C9orf72-203ENST00000380003 RPS28P62857 69 aaKnown RBP1.56□□□□□ -2.16
C9orf72-203ENST00000380003 PSPHP1O15172 72 aa1.55□□□□□ -2.16
C9orf72-203ENST00000380003 PRAC1Q96KF2 57 aa1.55□□□□□ -2.16
C9orf72-203ENST00000380003 KRTAP5-10Q6L8G5 202 aa1.53□□□□□ -2.16
C9orf72-203ENST00000380003 PRR15LQ9BU68 103 aa1.53□□□□□ -2.16
C9orf72-203ENST00000380003 KRTAP9-6A8MVA2 160 aa1.52□□□□□ -2.17
C9orf72-203ENST00000380003 LINC01558Q9Y6Z2 57 aa1.51□□□□□ -2.17
C9orf72-203ENST00000380003 UQCR11O14957 56 aa1.51□□□□□ -2.17
C9orf72-203ENST00000380003 KRTAP20-2Q3LI61 65 aa1.51□□□□□ -2.17
C9orf72-203ENST00000380003 SPRR5A0A1B0GTR4 108 aa1.5□□□□□ -2.17
C9orf72-203ENST00000380003 MIR22HGQ0VDD5 57 aa1.49□□□□□ -2.17
C9orf72-203ENST00000380003 KRTAP5-5Q701N2 237 aaPredicted RBP1.49□□□□□ -2.17
C9orf72-203ENST00000380003 KTN1-AS1Q86SY8 53 aa1.47□□□□□ -2.17
C9orf72-203ENST00000380003 KRTAP12-4P60329 112 aa1.46□□□□□ -2.18
C9orf72-203ENST00000380003 TMEM258P61165 79 aa1.45□□□□□ -2.18
C9orf72-203ENST00000380003 ATP5EP56381 51 aaPredicted RBP1.45□□□□□ -2.18
C9orf72-203ENST00000380003 KRTAP25-1Q3LHN0 102 aa1.44□□□□□ -2.18
C9orf72-203ENST00000380003 KRTAP6-1Q3LI64 71 aa1.44□□□□□ -2.18
C9orf72-203ENST00000380003 LCE3CQ5T5A8 94 aa1.43□□□□□ -2.18
C9orf72-203ENST00000380003 A6NED7 52 aa1.42□□□□□ -2.18
C9orf72-203ENST00000380003 K7ERS5 55 aa1.42□□□□□ -2.18
C9orf72-203ENST00000380003 BRK1Q8WUW1 75 aa1.41□□□□□ -2.18
C9orf72-203ENST00000380003 LUZP6Q538Z0 58 aa1.4□□□□□ -2.19
C9orf72-203ENST00000380003 KRTAP6-2Q3LI66 62 aa1.38□□□□□ -2.19
C9orf72-203ENST00000380003 Q1T7F1 81 aa1.38□□□□□ -2.19
C9orf72-203ENST00000380003 CDC42SE1Q9NRR8 79 aa1.37□□□□□ -2.19
C9orf72-203ENST00000380003 MT1AP04731 61 aa1.36□□□□□ -2.19
C9orf72-203ENST00000380003 ROMO1P60602 79 aa1.34□□□□□ -2.19
C9orf72-203ENST00000380003 MUC5ACP98088 5654 aa1.34□□□□□ -2.2
C9orf72-203ENST00000380003 NDUFAF8A1L188 74 aa1.31□□□□□ -2.2
C9orf72-203ENST00000380003 LCE1CQ5T751 118 aa1.21□□□□□ -2.22
C9orf72-203ENST00000380003 LCE1BQ5T7P3 118 aa1.21□□□□□ -2.22
C9orf72-203ENST00000380003 LCE1FQ5T754 118 aa1.1□□□□□ -2.23
C9orf72-203ENST00000380003 MUC19Q7Z5P9 8384 aa1.06□□□□□ -2.24
C9orf72-203ENST00000380003 INE1O15225 51 aa1.05□□□□□ -2.24
C9orf72-203ENST00000380003 LCE3DQ9BYE3 92 aa1.03□□□□□ -2.24
C9orf72-203ENST00000380003 LCE3EQ5T5B0 92 aa0.94□□□□□ -2.26
C9orf72-203ENST00000380003 PHGR1C9JFL3 82 aa0.93□□□□□ -2.26
C9orf72-203ENST00000380003 KRTAP21-2Q3LI59 83 aa0.92□□□□□ -2.26
C9orf72-203ENST00000380003 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
C9orf72-203ENST00000380003 MUC16Q8WXI7 14507 aa0.76□□□□□ -2.29
C9orf72-203ENST00000380003 PRM1P04553 51 aa0.74□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 102.9 ms