RNA–Protein interactions for RNA: ENST00000379236.3

TNFRSF4-201, Transcript of TNF receptor superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF4, Length 1,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-201ENST00000379236 LCE4AQ5TA78 99 aa8.57□□□□□ -1.04
TNFRSF4-201ENST00000379236 LCE1DQ5T752 114 aa8.55□□□□□ -1.04
TNFRSF4-201ENST00000379236 GPR98Q8WXG9 6306 aa8.54□□□□□ -1.04
TNFRSF4-201ENST00000379236 KRTAP4-3Q9BYR4 195 aa8.52□□□□□ -1.05
TNFRSF4-201ENST00000379236 MT4P47944 62 aa8.49□□□□□ -1.05
TNFRSF4-201ENST00000379236 KRTAP12-3P60328 96 aa8.49□□□□□ -1.05
TNFRSF4-201ENST00000379236 MIR22HGQ0VDD5 57 aa8.48□□□□□ -1.05
TNFRSF4-201ENST00000379236 HMCN1Q96RW7 5635 aa8.42□□□□□ -1.06
TNFRSF4-201ENST00000379236 K7ERS5 55 aa8.42□□□□□ -1.06
TNFRSF4-201ENST00000379236 RPS28P62857 69 aaKnown RBP8.42□□□□□ -1.06
TNFRSF4-201ENST00000379236 KRTAP25-1Q3LHN0 102 aa8.36□□□□□ -1.07
TNFRSF4-201ENST00000379236 V9GYY9 64 aa8.33□□□□□ -1.08
TNFRSF4-201ENST00000379236 KRTAP5-4Q6L8H1 288 aa8.32□□□□□ -1.08
TNFRSF4-201ENST00000379236 KRTAP4-7Q9BYR0 210 aa8.32□□□□□ -1.08
TNFRSF4-201ENST00000379236 PSPHP1O15172 72 aa8.27□□□□□ -1.09
TNFRSF4-201ENST00000379236 Q1T7F1 81 aa8.18□□□□□ -1.1
TNFRSF4-201ENST00000379236 KRTAP4-6Q9BYQ5 205 aa8.18□□□□□ -1.1
TNFRSF4-201ENST00000379236 AHNAK2Q8IVF2 5795 aa8.15□□□□□ -1.11
TNFRSF4-201ENST00000379236 A6NED7 52 aa8.03□□□□□ -1.12
TNFRSF4-201ENST00000379236 KRTAP23-1A1A580 65 aa8.01□□□□□ -1.13
TNFRSF4-201ENST00000379236 KRTAP19-4Q3LI73 84 aa8.01□□□□□ -1.13
TNFRSF4-201ENST00000379236 KRTAP5-5Q701N2 237 aaPredicted RBP7.97□□□□□ -1.13
TNFRSF4-201ENST00000379236 KRTAP5-10Q6L8G5 202 aa7.93□□□□□ -1.14
TNFRSF4-201ENST00000379236 KRTAP15-1Q3LI76 137 aa7.92□□□□□ -1.14
TNFRSF4-201ENST00000379236 CDC42SE1Q9NRR8 79 aa7.92□□□□□ -1.14
TNFRSF4-201ENST00000379236 KRTAP12-4P60329 112 aa7.9□□□□□ -1.14
TNFRSF4-201ENST00000379236 KRTAP20-2Q3LI61 65 aa7.9□□□□□ -1.14
TNFRSF4-201ENST00000379236 LOC100996750A0A140TA64 210 aa7.88□□□□□ -1.15
TNFRSF4-201ENST00000379236 SPRR5A0A1B0GTR4 108 aa7.86□□□□□ -1.15
TNFRSF4-201ENST00000379236 LCE3CQ5T5A8 94 aa7.8□□□□□ -1.16
TNFRSF4-201ENST00000379236 KRTAP5-3Q6L8H2 238 aa7.77□□□□□ -1.17
TNFRSF4-201ENST00000379236 ROMO1P60602 79 aa7.75□□□□□ -1.17
TNFRSF4-201ENST00000379236 SYNE1Q8NF91 8797 aaKnown RBP7.67□□□□□ -1.18
TNFRSF4-201ENST00000379236 KRTAP5-7Q6L8G8 165 aa7.64□□□□□ -1.19
TNFRSF4-201ENST00000379236 BRK1Q8WUW1 75 aa7.52□□□□□ -1.21
TNFRSF4-201ENST00000379236 MT1AP04731 61 aa7.47□□□□□ -1.21
TNFRSF4-201ENST00000379236 PRO0628Q9UI54 55 aa7.46□□□□□ -1.22
TNFRSF4-201ENST00000379236 KRTAP6-1Q3LI64 71 aa7.41□□□□□ -1.22
TNFRSF4-201ENST00000379236 KRTAP9-6A8MVA2 160 aa7.28□□□□□ -1.24
TNFRSF4-201ENST00000379236 KRTAP5-2Q701N4 177 aa7.28□□□□□ -1.24
TNFRSF4-201ENST00000379236 KRTAP9-4Q9BYQ2 154 aa7.22□□□□□ -1.25
TNFRSF4-201ENST00000379236 KRTAP4-11Q9BYQ6 195 aa7.22□□□□□ -1.25
TNFRSF4-201ENST00000379236 PMAIP1Q13794 54 aa7.14□□□□□ -1.27
TNFRSF4-201ENST00000379236 KRTAP6-2Q3LI66 62 aa7.11□□□□□ -1.27
TNFRSF4-201ENST00000379236 SVIPQ8NHG7 77 aa7□□□□□ -1.29
TNFRSF4-201ENST00000379236 KRTAP5-8O75690 187 aa6.95□□□□□ -1.3
TNFRSF4-201ENST00000379236 KTN1-AS1Q86SY8 53 aa6.9□□□□□ -1.3
TNFRSF4-201ENST00000379236 MT3P25713 68 aa6.87□□□□□ -1.31
TNFRSF4-201ENST00000379236 OBSCNQ5VST9 7968 aa6.83□□□□□ -1.32
TNFRSF4-201ENST00000379236 KRTAP9-9Q9BYP9 154 aa6.69□□□□□ -1.34
TNFRSF4-201ENST00000379236 MUC5BQ9HC84 5762 aaPredicted RBP6.69□□□□□ -1.34
TNFRSF4-201ENST00000379236 AHNAKQ09666 5890 aaKnown RBP6.69□□□□□ -1.34
TNFRSF4-201ENST00000379236 MUC5ACP98088 5654 aa6.65□□□□□ -1.34
TNFRSF4-201ENST00000379236 PRAC1Q96KF2 57 aa6.57□□□□□ -1.36
TNFRSF4-201ENST00000379236 KRTAP5-1Q6L8H4 278 aa6.53□□□□□ -1.36
TNFRSF4-201ENST00000379236 LCE1EQ5T753 118 aa6.27□□□□□ -1.41
TNFRSF4-201ENST00000379236 LCE1BQ5T7P3 118 aa5.98□□□□□ -1.45
TNFRSF4-201ENST00000379236 KRTAP4-2Q9BYR5 136 aa5.9□□□□□ -1.46
TNFRSF4-201ENST00000379236 LCE1CQ5T751 118 aa5.82□□□□□ -1.48
TNFRSF4-201ENST00000379236 LCE3DQ9BYE3 92 aa5.64□□□□□ -1.51
TNFRSF4-201ENST00000379236 LUZP6Q538Z0 58 aa5.52□□□□□ -1.53
TNFRSF4-201ENST00000379236 KRTAP4-12Q9BQ66 201 aa5.41□□□□□ -1.54
TNFRSF4-201ENST00000379236 NDUFAF8A1L188 74 aa5.31□□□□□ -1.56
TNFRSF4-201ENST00000379236 LCE3EQ5T5B0 92 aa5.3□□□□□ -1.56
TNFRSF4-201ENST00000379236 KRTAP5-11Q6L8G4 156 aa5.28□□□□□ -1.56
TNFRSF4-201ENST00000379236 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.27□□□□□ -1.57
TNFRSF4-201ENST00000379236 LCE1FQ5T754 118 aa5.16□□□□□ -1.58
TNFRSF4-201ENST00000379236 KRTAP21-2Q3LI59 83 aa4.85□□□□□ -1.63
TNFRSF4-201ENST00000379236 A0A0A0MQY5 61 aa4.82□□□□□ -1.64
TNFRSF4-201ENST00000379236 H3BS24 57 aa4.77□□□□□ -1.65
TNFRSF4-201ENST00000379236 PHGR1C9JFL3 82 aa4.68□□□□□ -1.66
TNFRSF4-201ENST00000379236 INE1O15225 51 aa4.53□□□□□ -1.68
TNFRSF4-201ENST00000379236 KRTAP4-4Q9BYR3 166 aa4.5□□□□□ -1.69
TNFRSF4-201ENST00000379236 MUC19Q7Z5P9 8384 aa4.2□□□□□ -1.74
TNFRSF4-201ENST00000379236 PRM1P04553 51 aa3.95□□□□□ -1.78
TNFRSF4-201ENST00000379236 KRTAP21-1Q3LI58 79 aa3.55□□□□□ -1.84
TNFRSF4-201ENST00000379236 MUC16Q8WXI7 14507 aa2.99□□□□□ -1.93
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms