RNA–Protein interactions for RNA: ENST00000379160.3

PCNA-202, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PCNA, Length 1,359 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-202ENST00000379160 KRTAP19-3Q7Z4W3 81 aa5.11□□□□□ -1.59
PCNA-202ENST00000379160 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.1□□□□□ -1.59
PCNA-202ENST00000379160 A0A0D9SG42 100 aa5.04□□□□□ -1.6
PCNA-202ENST00000379160 ATP5EP56381 51 aaPredicted RBP5.04□□□□□ -1.6
PCNA-202ENST00000379160 TMEM258P61165 79 aa4.99□□□□□ -1.61
PCNA-202ENST00000379160 KRTAP19-5Q3LI72 72 aa4.99□□□□□ -1.61
PCNA-202ENST00000379160 MT1GP13640 62 aa4.97□□□□□ -1.61
PCNA-202ENST00000379160 SEC61GP60059 68 aa4.97□□□□□ -1.61
PCNA-202ENST00000379160 SPATA8Q6RVD6 105 aa4.97□□□□□ -1.61
PCNA-202ENST00000379160 SPINT4Q6UDR6 99 aa4.97□□□□□ -1.61
PCNA-202ENST00000379160 SERP1Q9Y6X1 66 aa4.95□□□□□ -1.62
PCNA-202ENST00000379160 PP632Q6XCG6 107 aa4.92□□□□□ -1.62
PCNA-202ENST00000379160 MT4P47944 62 aa4.91□□□□□ -1.62
PCNA-202ENST00000379160 A0A1B0GU33 70 aa4.89□□□□□ -1.63
PCNA-202ENST00000379160 KRTAP12-1P59990 96 aa4.89□□□□□ -1.63
PCNA-202ENST00000379160 MT1MQ8N339 61 aa4.89□□□□□ -1.63
PCNA-202ENST00000379160 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
PCNA-202ENST00000379160 LCE3CQ5T5A8 94 aa4.88□□□□□ -1.63
PCNA-202ENST00000379160 A0A1B0GU69 56 aa4.87□□□□□ -1.63
PCNA-202ENST00000379160 MT1LQ93083 61 aa4.86□□□□□ -1.63
PCNA-202ENST00000379160 KRTAP4-3Q9BYR4 195 aa4.82□□□□□ -1.64
PCNA-202ENST00000379160 KRTAP9-6A8MVA2 160 aa4.8□□□□□ -1.64
PCNA-202ENST00000379160 PRR15LQ9BU68 103 aa4.8□□□□□ -1.64
PCNA-202ENST00000379160 LINC01558Q9Y6Z2 57 aa4.78□□□□□ -1.64
PCNA-202ENST00000379160 A8MU10 97 aa4.78□□□□□ -1.64
PCNA-202ENST00000379160 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
PCNA-202ENST00000379160 C10orf95Q9H7T3 257 aa4.78□□□□□ -1.64
PCNA-202ENST00000379160 KRTAP5-4Q6L8H1 288 aa4.76□□□□□ -1.65
PCNA-202ENST00000379160 SMIM26A0A096LP01 95 aa4.74□□□□□ -1.65
PCNA-202ENST00000379160 AHNAK2Q8IVF2 5795 aa4.72□□□□□ -1.65
PCNA-202ENST00000379160 TNP1P09430 55 aa4.71□□□□□ -1.66
PCNA-202ENST00000379160 KRTAP5-10Q6L8G5 202 aa4.71□□□□□ -1.66
PCNA-202ENST00000379160 V9GYY9 64 aa4.67□□□□□ -1.66
PCNA-202ENST00000379160 UQCR11O14957 56 aa4.64□□□□□ -1.67
PCNA-202ENST00000379160 Q1T7F1 81 aa4.63□□□□□ -1.67
PCNA-202ENST00000379160 PSPHP1O15172 72 aa4.6□□□□□ -1.67
PCNA-202ENST00000379160 RPS28P62857 69 aaKnown RBP4.6□□□□□ -1.67
PCNA-202ENST00000379160 KRTAP12-3P60328 96 aa4.58□□□□□ -1.68
PCNA-202ENST00000379160 MIR22HGQ0VDD5 57 aa4.54□□□□□ -1.68
PCNA-202ENST00000379160 KRTAP5-7Q6L8G8 165 aa4.53□□□□□ -1.68
PCNA-202ENST00000379160 KRTAP20-2Q3LI61 65 aa4.53□□□□□ -1.69
PCNA-202ENST00000379160 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
PCNA-202ENST00000379160 A6NED7 52 aa4.47□□□□□ -1.69
PCNA-202ENST00000379160 SPRR5A0A1B0GTR4 108 aa4.46□□□□□ -1.7
PCNA-202ENST00000379160 K7ERS5 55 aa4.45□□□□□ -1.7
PCNA-202ENST00000379160 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
PCNA-202ENST00000379160 LCE3EQ5T5B0 92 aa4.42□□□□□ -1.7
PCNA-202ENST00000379160 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
PCNA-202ENST00000379160 SYNE1Q8NF91 8797 aaKnown RBP4.34□□□□□ -1.72
PCNA-202ENST00000379160 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
PCNA-202ENST00000379160 CDC42SE1Q9NRR8 79 aa4.31□□□□□ -1.72
PCNA-202ENST00000379160 KRTAP4-4Q9BYR3 166 aa4.17□□□□□ -1.74
PCNA-202ENST00000379160 ROMO1P60602 79 aa4.16□□□□□ -1.74
PCNA-202ENST00000379160 KRTAP6-1Q3LI64 71 aa4.14□□□□□ -1.75
PCNA-202ENST00000379160 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
PCNA-202ENST00000379160 MT1AP04731 61 aa4.12□□□□□ -1.75
PCNA-202ENST00000379160 BRK1Q8WUW1 75 aa4.11□□□□□ -1.75
PCNA-202ENST00000379160 KRTAP5-8O75690 187 aa4.04□□□□□ -1.76
PCNA-202ENST00000379160 KRTAP6-2Q3LI66 62 aa4□□□□□ -1.77
PCNA-202ENST00000379160 OBSCNQ5VST9 7968 aa3.98□□□□□ -1.77
PCNA-202ENST00000379160 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
PCNA-202ENST00000379160 MUC5BQ9HC84 5762 aaPredicted RBP3.93□□□□□ -1.78
PCNA-202ENST00000379160 AHNAKQ09666 5890 aaKnown RBP3.89□□□□□ -1.79
PCNA-202ENST00000379160 PMAIP1Q13794 54 aa3.87□□□□□ -1.79
PCNA-202ENST00000379160 PRO0628Q9UI54 55 aa3.8□□□□□ -1.8
PCNA-202ENST00000379160 LCE3DQ9BYE3 92 aa3.63□□□□□ -1.83
PCNA-202ENST00000379160 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
PCNA-202ENST00000379160 LCE1BQ5T7P3 118 aa3.63□□□□□ -1.83
PCNA-202ENST00000379160 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
PCNA-202ENST00000379160 LUZP6Q538Z0 58 aa3.09□□□□□ -1.92
PCNA-202ENST00000379160 MUC19Q7Z5P9 8384 aa2.81□□□□□ -1.96
PCNA-202ENST00000379160 PHGR1C9JFL3 82 aa2.76□□□□□ -1.97
PCNA-202ENST00000379160 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
PCNA-202ENST00000379160 INE1O15225 51 aa2.3□□□□□ -2.04
PCNA-202ENST00000379160 PRM1P04553 51 aa2.14□□□□□ -2.07
PCNA-202ENST00000379160 KRTAP21-1Q3LI58 79 aa2.08□□□□□ -2.08
PCNA-202ENST00000379160 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms