RNA–Protein interactions for RNA: ENST00000378610.1

CDKAL1-202, Transcript of CDK5 regulatory subunit associated protein 1 like 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDKAL1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1-202ENST00000378610 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
CDKAL1-202ENST00000378610 LCE3AQ5TA76 89 aa2.66□□□□□ -1.98
CDKAL1-202ENST00000378610 LCE1EQ5T753 118 aa2.64□□□□□ -1.99
CDKAL1-202ENST00000378610 KRTAP6-3Q3LI67 103 aa2.63□□□□□ -1.99
CDKAL1-202ENST00000378610 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
CDKAL1-202ENST00000378610 AHNAKQ09666 5890 aaKnown RBP2.58□□□□□ -2
CDKAL1-202ENST00000378610 KRTAP10-10P60014 251 aa2.57□□□□□ -2
CDKAL1-202ENST00000378610 NEBP20929 6669 aa2.57□□□□□ -2
CDKAL1-202ENST00000378610 KRTAP10-5P60370 271 aa2.57□□□□□ -2
CDKAL1-202ENST00000378610 KRTAP2-3P0C7H8 128 aa2.55□□□□□ -2
CDKAL1-202ENST00000378610 KRTAP2-4Q9BYR9 128 aa2.55□□□□□ -2
CDKAL1-202ENST00000378610 KRTAP19-8Q3LI54 63 aa2.53□□□□□ -2
CDKAL1-202ENST00000378610 HMCN2Q8NDA2 5059 aa2.53□□□□□ -2
CDKAL1-202ENST00000378610 KRTAP12-3P60328 96 aa2.51□□□□□ -2.01
CDKAL1-202ENST00000378610 MT1XP80297 61 aa2.49□□□□□ -2.01
CDKAL1-202ENST00000378610 KRTAP10-7P60409 375 aaPredicted RBP2.48□□□□□ -2.01
CDKAL1-202ENST00000378610 KRTAP2-1Q9BYU5 128 aa2.47□□□□□ -2.01
CDKAL1-202ENST00000378610 MT1HP80294 61 aa2.45□□□□□ -2.02
CDKAL1-202ENST00000378610 MT1BP07438 61 aa2.44□□□□□ -2.02
CDKAL1-202ENST00000378610 MT2AP02795 61 aa2.44□□□□□ -2.02
CDKAL1-202ENST00000378610 MT1FP04733 61 aa2.42□□□□□ -2.02
CDKAL1-202ENST00000378610 RNF213Q63HN8 5207 aa2.41□□□□□ -2.02
CDKAL1-202ENST00000378610 LCE3DQ9BYE3 92 aa2.41□□□□□ -2.02
CDKAL1-202ENST00000378610 KRTAP9-6A8MVA2 160 aa2.39□□□□□ -2.03
CDKAL1-202ENST00000378610 KRTAP19-5Q3LI72 72 aa2.35□□□□□ -2.03
CDKAL1-202ENST00000378610 KRTAP12-4P60329 112 aa2.33□□□□□ -2.04
CDKAL1-202ENST00000378610 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
CDKAL1-202ENST00000378610 M0R2T5 61 aa2.3□□□□□ -2.04
CDKAL1-202ENST00000378610 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
CDKAL1-202ENST00000378610 FSIP2Q5CZC0 6907 aa2.22□□□□□ -2.05
CDKAL1-202ENST00000378610 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
CDKAL1-202ENST00000378610 MT1LQ93083 61 aa2.17□□□□□ -2.06
CDKAL1-202ENST00000378610 MT1EP04732 61 aa2.15□□□□□ -2.06
CDKAL1-202ENST00000378610 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.15□□□□□ -2.07
CDKAL1-202ENST00000378610 KMT2DO14686 5537 aa2.13□□□□□ -2.07
CDKAL1-202ENST00000378610 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.07
CDKAL1-202ENST00000378610 SYNE2Q8WXH0 6885 aaKnown RBP2.08□□□□□ -2.08
CDKAL1-202ENST00000378610 KRTAP5-9P26371 169 aa2.06□□□□□ -2.08
CDKAL1-202ENST00000378610 MT1AP04731 61 aa2.04□□□□□ -2.08
CDKAL1-202ENST00000378610 KRTAP19-6Q3LI70 58 aa2.04□□□□□ -2.08
CDKAL1-202ENST00000378610 USH2AO75445 5202 aa1.99□□□□□ -2.09
CDKAL1-202ENST00000378610 KRTAP5-5Q701N2 237 aaPredicted RBP1.99□□□□□ -2.09
CDKAL1-202ENST00000378610 OBSCNQ5VST9 7968 aa1.97□□□□□ -2.09
CDKAL1-202ENST00000378610 MT1GP13640 62 aa1.96□□□□□ -2.1
CDKAL1-202ENST00000378610 MT1MQ8N339 61 aa1.95□□□□□ -2.1
CDKAL1-202ENST00000378610 KRTAP4-3Q9BYR4 195 aa1.95□□□□□ -2.1
CDKAL1-202ENST00000378610 MUC5ACP98088 5654 aa1.95□□□□□ -2.1
CDKAL1-202ENST00000378610 FCGBPQ9Y6R7 5405 aaPredicted RBP1.93□□□□□ -2.1
CDKAL1-202ENST00000378610 KRTAP19-3Q7Z4W3 81 aa1.93□□□□□ -2.1
CDKAL1-202ENST00000378610 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
CDKAL1-202ENST00000378610 MACF1Q9UPN3 7388 aaKnown RBP1.9□□□□□ -2.1
CDKAL1-202ENST00000378610 PRM1P04553 51 aa1.9□□□□□ -2.11
CDKAL1-202ENST00000378610 KRTAP5-4Q6L8H1 288 aa1.85□□□□□ -2.11
CDKAL1-202ENST00000378610 KRTAP6-1Q3LI64 71 aa1.82□□□□□ -2.12
CDKAL1-202ENST00000378610 MDN1Q9NU22 5596 aa1.81□□□□□ -2.12
CDKAL1-202ENST00000378610 SPRR2FQ96RM1 72 aa1.8□□□□□ -2.12
CDKAL1-202ENST00000378610 MUC19Q7Z5P9 8384 aa1.8□□□□□ -2.12
CDKAL1-202ENST00000378610 KRTAP6-2Q3LI66 62 aa1.79□□□□□ -2.12
CDKAL1-202ENST00000378610 MUC12Q9UKN1 5478 aa1.77□□□□□ -2.13
CDKAL1-202ENST00000378610 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
CDKAL1-202ENST00000378610 KRTAP5-1Q6L8H4 278 aa1.76□□□□□ -2.13
CDKAL1-202ENST00000378610 SYNE1Q8NF91 8797 aaKnown RBP1.68□□□□□ -2.14
CDKAL1-202ENST00000378610 SPRR2AP35326 72 aa1.68□□□□□ -2.14
CDKAL1-202ENST00000378610 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
CDKAL1-202ENST00000378610 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
CDKAL1-202ENST00000378610 KRTAP5-2Q701N4 177 aa1.65□□□□□ -2.14
CDKAL1-202ENST00000378610 SPRR2EP22531 72 aa1.63□□□□□ -2.15
CDKAL1-202ENST00000378610 SPRR2BP35325 72 aa1.61□□□□□ -2.15
CDKAL1-202ENST00000378610 DSTQ03001 7570 aaKnown RBP1.59□□□□□ -2.15
CDKAL1-202ENST00000378610 SPRR2DP22532 72 aa1.56□□□□□ -2.16
CDKAL1-202ENST00000378610 KRTAP5-8O75690 187 aa1.52□□□□□ -2.17
CDKAL1-202ENST00000378610 MT4P47944 62 aa1.38□□□□□ -2.19
CDKAL1-202ENST00000378610 KRTAP20-2Q3LI61 65 aa1.37□□□□□ -2.19
CDKAL1-202ENST00000378610 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
CDKAL1-202ENST00000378610 KRTAP21-2Q3LI59 83 aa1.22□□□□□ -2.21
CDKAL1-202ENST00000378610 PHGR1C9JFL3 82 aa1.17□□□□□ -2.22
CDKAL1-202ENST00000378610 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 10.6 ms