RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 SPRR2DP22532 72 aa3.77□□□□□ -1.81
NPHP4-202ENST00000378161 KRTAP9-6A0A140TA67 174 aa3.76□□□□□ -1.81
NPHP4-202ENST00000378161 LCE2AQ5TA79 106 aaPredicted RBP3.74□□□□□ -1.81
NPHP4-202ENST00000378161 KRTAP9-6A8MVA2 160 aa3.74□□□□□ -1.81
NPHP4-202ENST00000378161 SYNE1Q8NF91 8797 aaKnown RBP3.73□□□□□ -1.81
NPHP4-202ENST00000378161 LCE3EQ5T5B0 92 aa3.73□□□□□ -1.81
NPHP4-202ENST00000378161 MT1LQ93083 61 aa3.73□□□□□ -1.81
NPHP4-202ENST00000378161 MT1GP13640 62 aa3.72□□□□□ -1.81
NPHP4-202ENST00000378161 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
NPHP4-202ENST00000378161 LCE3DQ9BYE3 92 aa3.7□□□□□ -1.82
NPHP4-202ENST00000378161 OBSCNQ5VST9 7968 aa3.7□□□□□ -1.82
NPHP4-202ENST00000378161 KMT2DO14686 5537 aa3.7□□□□□ -1.82
NPHP4-202ENST00000378161 MT1EP04732 61 aa3.69□□□□□ -1.82
NPHP4-202ENST00000378161 LCE3BQ5TA77 95 aa3.68□□□□□ -1.82
NPHP4-202ENST00000378161 LCE1AQ5T7P2 110 aa3.65□□□□□ -1.83
NPHP4-202ENST00000378161 KRTAP19-7Q3SYF9 63 aa3.61□□□□□ -1.83
NPHP4-202ENST00000378161 DSTQ03001 7570 aaKnown RBP3.61□□□□□ -1.83
NPHP4-202ENST00000378161 KRTAP19-3Q7Z4W3 81 aa3.6□□□□□ -1.83
NPHP4-202ENST00000378161 KRTAP19-6Q3LI70 58 aa3.57□□□□□ -1.84
NPHP4-202ENST00000378161 KRTAP2-2Q9BYT5 123 aa3.56□□□□□ -1.84
NPHP4-202ENST00000378161 FCGBPQ9Y6R7 5405 aaPredicted RBP3.54□□□□□ -1.84
NPHP4-202ENST00000378161 LCE2DQ5TA82 110 aaPredicted RBP3.53□□□□□ -1.84
NPHP4-202ENST00000378161 KRTAP9-7A8MTY7 169 aa3.51□□□□□ -1.85
NPHP4-202ENST00000378161 MT1MQ8N339 61 aa3.51□□□□□ -1.85
NPHP4-202ENST00000378161 KRTAP6-3Q3LI67 103 aa3.51□□□□□ -1.85
NPHP4-202ENST00000378161 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
NPHP4-202ENST00000378161 LOC100996750A0A140TA64 210 aa3.46□□□□□ -1.86
NPHP4-202ENST00000378161 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
NPHP4-202ENST00000378161 KRTAP20-1Q3LI63 56 aa3.44□□□□□ -1.86
NPHP4-202ENST00000378161 SYNE2Q8WXH0 6885 aaKnown RBP3.41□□□□□ -1.86
NPHP4-202ENST00000378161 KRTAP4-9Q9BYQ8 210 aa3.41□□□□□ -1.86
NPHP4-202ENST00000378161 MUC12Q9UKN1 5478 aa3.39□□□□□ -1.87
NPHP4-202ENST00000378161 MACF1Q9UPN3 7388 aaKnown RBP3.38□□□□□ -1.87
NPHP4-202ENST00000378161 SSPOA2VEC9 5147 aa3.34□□□□□ -1.87
NPHP4-202ENST00000378161 MT1AP04731 61 aa3.33□□□□□ -1.88
NPHP4-202ENST00000378161 MT3P25713 68 aa3.33□□□□□ -1.88
NPHP4-202ENST00000378161 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
NPHP4-202ENST00000378161 MT4P47944 62 aa3.3□□□□□ -1.88
NPHP4-202ENST00000378161 KRTAP6-2Q3LI66 62 aa3.3□□□□□ -1.88
NPHP4-202ENST00000378161 LCE1DQ5T752 114 aa3.29□□□□□ -1.88
NPHP4-202ENST00000378161 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.26□□□□□ -1.89
NPHP4-202ENST00000378161 LCE5AQ5TCM9 118 aa3.18□□□□□ -1.9
NPHP4-202ENST00000378161 LCE1FQ5T754 118 aa3.13□□□□□ -1.91
NPHP4-202ENST00000378161 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
NPHP4-202ENST00000378161 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
NPHP4-202ENST00000378161 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
NPHP4-202ENST00000378161 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
NPHP4-202ENST00000378161 LCE4AQ5TA78 99 aa3□□□□□ -1.93
NPHP4-202ENST00000378161 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
NPHP4-202ENST00000378161 MUC19Q7Z5P9 8384 aa2.98□□□□□ -1.93
NPHP4-202ENST00000378161 KRTAP5-9P26371 169 aa2.86□□□□□ -1.95
NPHP4-202ENST00000378161 NEBP20929 6669 aa2.83□□□□□ -1.96
NPHP4-202ENST00000378161 KRTAP4-11Q9BYQ6 195 aa2.77□□□□□ -1.97
NPHP4-202ENST00000378161 KRTAP9-9Q9BYP9 154 aa2.73□□□□□ -1.97
NPHP4-202ENST00000378161 LCE1CQ5T751 118 aa2.69□□□□□ -1.98
NPHP4-202ENST00000378161 KRTAP4-6Q9BYQ5 205 aa2.64□□□□□ -1.99
NPHP4-202ENST00000378161 KRTAP20-2Q3LI61 65 aa2.52□□□□□ -2.01
NPHP4-202ENST00000378161 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
NPHP4-202ENST00000378161 MUC5ACP98088 5654 aa2.38□□□□□ -2.03
NPHP4-202ENST00000378161 KRTAP5-4Q6L8H1 288 aa2.32□□□□□ -2.04
NPHP4-202ENST00000378161 HMCN1Q96RW7 5635 aa2.31□□□□□ -2.04
NPHP4-202ENST00000378161 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
NPHP4-202ENST00000378161 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
NPHP4-202ENST00000378161 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
NPHP4-202ENST00000378161 KRTAP4-12Q9BQ66 201 aa2.13□□□□□ -2.07
NPHP4-202ENST00000378161 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
NPHP4-202ENST00000378161 KRTAP4-2Q9BYR5 136 aa2.13□□□□□ -2.07
NPHP4-202ENST00000378161 KRTAP21-1Q3LI58 79 aa2.11□□□□□ -2.07
NPHP4-202ENST00000378161 KRTAP5-8O75690 187 aa1.97□□□□□ -2.09
NPHP4-202ENST00000378161 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
NPHP4-202ENST00000378161 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
NPHP4-202ENST00000378161 PHGR1C9JFL3 82 aa1.84□□□□□ -2.11
NPHP4-202ENST00000378161 KRTAP5-1Q6L8H4 278 aa1.83□□□□□ -2.12
NPHP4-202ENST00000378161 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
NPHP4-202ENST00000378161 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
NPHP4-202ENST00000378161 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
NPHP4-202ENST00000378161 KRTAP5-7Q6L8G8 165 aa1.68□□□□□ -2.14
NPHP4-202ENST00000378161 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 195.8 ms