RNA–Protein interactions for RNA: ENST00000378037.9

CKAP2-203, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKAP2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-203ENST00000378037 KRTAP4-7Q9BYR0 210 aa3.11□□□□□ -1.91
CKAP2-203ENST00000378037 MACF1Q9UPN3 7388 aaKnown RBP3.11□□□□□ -1.91
CKAP2-203ENST00000378037 KRTAP8-1Q8IUC2 63 aa3.1□□□□□ -1.91
CKAP2-203ENST00000378037 KRTAP19-6Q3LI70 58 aa3.09□□□□□ -1.91
CKAP2-203ENST00000378037 KRTAP19-8Q3LI54 63 aa3.07□□□□□ -1.92
CKAP2-203ENST00000378037 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
CKAP2-203ENST00000378037 LCE3BQ5TA77 95 aa3.05□□□□□ -1.92
CKAP2-203ENST00000378037 KRTAP4-9Q9BYQ8 210 aa3.03□□□□□ -1.92
CKAP2-203ENST00000378037 LCE1DQ5T752 114 aa3.02□□□□□ -1.93
CKAP2-203ENST00000378037 SPRR5A0A1B0GTR4 108 aa2.95□□□□□ -1.94
CKAP2-203ENST00000378037 KRTAP4-3Q9BYR4 195 aa2.95□□□□□ -1.94
CKAP2-203ENST00000378037 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
CKAP2-203ENST00000378037 MDN1Q9NU22 5596 aa2.94□□□□□ -1.94
CKAP2-203ENST00000378037 KRTAP19-4Q3LI73 84 aa2.94□□□□□ -1.94
CKAP2-203ENST00000378037 MT1GP13640 62 aa2.89□□□□□ -1.95
CKAP2-203ENST00000378037 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
CKAP2-203ENST00000378037 KRTAP6-3Q3LI67 103 aa2.88□□□□□ -1.95
CKAP2-203ENST00000378037 INE1O15225 51 aa2.88□□□□□ -1.95
CKAP2-203ENST00000378037 LCE3CQ5T5A8 94 aa2.87□□□□□ -1.95
CKAP2-203ENST00000378037 KRTAP4-11Q9BYQ6 195 aa2.87□□□□□ -1.95
CKAP2-203ENST00000378037 KRTAP23-1A1A580 65 aa2.82□□□□□ -1.96
CKAP2-203ENST00000378037 LCE5AQ5TCM9 118 aa2.81□□□□□ -1.96
CKAP2-203ENST00000378037 KRTAP19-7Q3SYF9 63 aa2.8□□□□□ -1.96
CKAP2-203ENST00000378037 KRTAP9-7A8MTY7 169 aa2.8□□□□□ -1.96
CKAP2-203ENST00000378037 SPRR2EP22531 72 aa2.77□□□□□ -1.97
CKAP2-203ENST00000378037 SPRR2BP35325 72 aa2.77□□□□□ -1.97
CKAP2-203ENST00000378037 SPRR2AP35326 72 aa2.77□□□□□ -1.97
CKAP2-203ENST00000378037 MT1EP04732 61 aa2.76□□□□□ -1.97
CKAP2-203ENST00000378037 MT1LQ93083 61 aa2.76□□□□□ -1.97
CKAP2-203ENST00000378037 KRTAP9-6A8MVA2 160 aa2.73□□□□□ -1.97
CKAP2-203ENST00000378037 LCE4AQ5TA78 99 aa2.72□□□□□ -1.97
CKAP2-203ENST00000378037 KRTAP19-3Q7Z4W3 81 aa2.68□□□□□ -1.98
CKAP2-203ENST00000378037 LCE1AQ5T7P2 110 aa2.67□□□□□ -1.98
CKAP2-203ENST00000378037 MT1MQ8N339 61 aa2.64□□□□□ -1.99
CKAP2-203ENST00000378037 SPRR2DP22532 72 aa2.62□□□□□ -1.99
CKAP2-203ENST00000378037 NEBP20929 6669 aa2.58□□□□□ -2
CKAP2-203ENST00000378037 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
CKAP2-203ENST00000378037 MT4P47944 62 aa2.55□□□□□ -2
CKAP2-203ENST00000378037 MUC19Q7Z5P9 8384 aa2.51□□□□□ -2.01
CKAP2-203ENST00000378037 KRTAP12-4P60329 112 aa2.5□□□□□ -2.01
CKAP2-203ENST00000378037 KRTAP2-3P0C7H8 128 aa2.5□□□□□ -2.01
CKAP2-203ENST00000378037 KRTAP2-4Q9BYR9 128 aa2.5□□□□□ -2.01
CKAP2-203ENST00000378037 KRTAP6-1Q3LI64 71 aa2.44□□□□□ -2.02
CKAP2-203ENST00000378037 KRTAP20-1Q3LI63 56 aa2.43□□□□□ -2.02
CKAP2-203ENST00000378037 KRTAP5-4Q6L8H1 288 aa2.42□□□□□ -2.02
CKAP2-203ENST00000378037 KRTAP2-2Q9BYT5 123 aa2.4□□□□□ -2.02
CKAP2-203ENST00000378037 KRTAP2-1Q9BYU5 128 aa2.4□□□□□ -2.02
CKAP2-203ENST00000378037 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
CKAP2-203ENST00000378037 KRTAP5-5Q701N2 237 aaPredicted RBP2.33□□□□□ -2.04
CKAP2-203ENST00000378037 KRTAP6-2Q3LI66 62 aa2.31□□□□□ -2.04
CKAP2-203ENST00000378037 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
CKAP2-203ENST00000378037 MT1AP04731 61 aa2.26□□□□□ -2.05
CKAP2-203ENST00000378037 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
CKAP2-203ENST00000378037 LCE1EQ5T753 118 aa2.23□□□□□ -2.05
CKAP2-203ENST00000378037 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
CKAP2-203ENST00000378037 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
CKAP2-203ENST00000378037 PRM1P04553 51 aa2.2□□□□□ -2.06
CKAP2-203ENST00000378037 MT3P25713 68 aa2.18□□□□□ -2.06
CKAP2-203ENST00000378037 KRTAP5-2Q701N4 177 aa2.17□□□□□ -2.06
CKAP2-203ENST00000378037 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.14□□□□□ -2.07
CKAP2-203ENST00000378037 KRTAP5-7Q6L8G8 165 aa2.12□□□□□ -2.07
CKAP2-203ENST00000378037 KRTAP5-10Q6L8G5 202 aa2.1□□□□□ -2.07
CKAP2-203ENST00000378037 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.07
CKAP2-203ENST00000378037 KRTAP20-2Q3LI61 65 aa2.03□□□□□ -2.08
CKAP2-203ENST00000378037 LCE1FQ5T754 118 aa2□□□□□ -2.09
CKAP2-203ENST00000378037 AHNAK2Q8IVF2 5795 aa1.96□□□□□ -2.09
CKAP2-203ENST00000378037 KRTAP5-8O75690 187 aa1.96□□□□□ -2.1
CKAP2-203ENST00000378037 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
CKAP2-203ENST00000378037 KRTAP5-11Q6L8G4 156 aa1.93□□□□□ -2.1
CKAP2-203ENST00000378037 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
CKAP2-203ENST00000378037 AHNAKQ09666 5890 aaKnown RBP1.84□□□□□ -2.11
CKAP2-203ENST00000378037 KRTAP5-1Q6L8H4 278 aa1.8□□□□□ -2.12
CKAP2-203ENST00000378037 LCE1CQ5T751 118 aa1.7□□□□□ -2.14
CKAP2-203ENST00000378037 KRTAP21-2Q3LI59 83 aa1.39□□□□□ -2.19
CKAP2-203ENST00000378037 PHGR1C9JFL3 82 aa1.29□□□□□ -2.2
CKAP2-203ENST00000378037 KRTAP21-1Q3LI58 79 aa1.29□□□□□ -2.2
CKAP2-203ENST00000378037 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 123.1 ms