RNA–Protein interactions for RNA: ENST00000377027.1

C9orf85-202, Transcript of chromosome 9 open reading frame 85, humanhuman

TSL 3

Gene C9orf85, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-202ENST00000377027 SERP1Q9Y6X1 66 aa3.67□□□□□ -1.82
C9orf85-202ENST00000377027 H3BPC8 53 aa3.65□□□□□ -1.83
C9orf85-202ENST00000377027 KRTAP19-7Q3SYF9 63 aa3.63□□□□□ -1.83
C9orf85-202ENST00000377027 TRAV7A0A075B6U4 112 aa3.61□□□□□ -1.83
C9orf85-202ENST00000377027 KRTAP13-4Q3LI77 160 aa3.61□□□□□ -1.83
C9orf85-202ENST00000377027 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
C9orf85-202ENST00000377027 DSTQ03001 7570 aaKnown RBP3.6□□□□□ -1.83
C9orf85-202ENST00000377027 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
C9orf85-202ENST00000377027 MT1EP04732 61 aa3.58□□□□□ -1.84
C9orf85-202ENST00000377027 PMAIP1Q13794 54 aa3.57□□□□□ -1.84
C9orf85-202ENST00000377027 ACYP2P14621 99 aa3.55□□□□□ -1.84
C9orf85-202ENST00000377027 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
C9orf85-202ENST00000377027 HMCN1Q96RW7 5635 aa3.53□□□□□ -1.84
C9orf85-202ENST00000377027 H7BZZ5 65 aa3.52□□□□□ -1.85
C9orf85-202ENST00000377027 Q1T7F1 81 aa3.48□□□□□ -1.85
C9orf85-202ENST00000377027 SPTSSBQ8NFR3 76 aa3.48□□□□□ -1.85
C9orf85-202ENST00000377027 BRK1Q8WUW1 75 aa3.48□□□□□ -1.85
C9orf85-202ENST00000377027 CYSTM1Q9H1C7 97 aa3.46□□□□□ -1.86
C9orf85-202ENST00000377027 AHNAK2Q8IVF2 5795 aa3.45□□□□□ -1.86
C9orf85-202ENST00000377027 CHKB-CPT1BH3BT56 60 aa3.45□□□□□ -1.86
C9orf85-202ENST00000377027 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
C9orf85-202ENST00000377027 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
C9orf85-202ENST00000377027 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
C9orf85-202ENST00000377027 SNURFQ9Y675 71 aa3.44□□□□□ -1.86
C9orf85-202ENST00000377027 KTN1-AS1Q86SY8 53 aa3.43□□□□□ -1.86
C9orf85-202ENST00000377027 MT1GP13640 62 aa3.42□□□□□ -1.86
C9orf85-202ENST00000377027 MT1MQ8N339 61 aa3.42□□□□□ -1.86
C9orf85-202ENST00000377027 A0A0D9SG42 100 aa3.41□□□□□ -1.86
C9orf85-202ENST00000377027 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
C9orf85-202ENST00000377027 MT4P47944 62 aa3.4□□□□□ -1.87
C9orf85-202ENST00000377027 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.87
C9orf85-202ENST00000377027 MT1LQ93083 61 aa3.39□□□□□ -1.87
C9orf85-202ENST00000377027 SPANXA2-OT1Q8N9U9 137 aa3.38□□□□□ -1.87
C9orf85-202ENST00000377027 SPATA8Q6RVD6 105 aa3.37□□□□□ -1.87
C9orf85-202ENST00000377027 KRTAP12-1P59990 96 aa3.36□□□□□ -1.87
C9orf85-202ENST00000377027 KRTAP5-10Q6L8G5 202 aa3.34□□□□□ -1.87
C9orf85-202ENST00000377027 KRTAP5-5Q701N2 237 aaPredicted RBP3.34□□□□□ -1.87
C9orf85-202ENST00000377027 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
C9orf85-202ENST00000377027 COA5Q86WW8 74 aa3.33□□□□□ -1.88
C9orf85-202ENST00000377027 SPINT4Q6UDR6 99 aa3.31□□□□□ -1.88
C9orf85-202ENST00000377027 C10orf95Q9H7T3 257 aa3.28□□□□□ -1.88
C9orf85-202ENST00000377027 CDC42SE1Q9NRR8 79 aa3.28□□□□□ -1.88
C9orf85-202ENST00000377027 A0A1B0GU33 70 aa3.26□□□□□ -1.89
C9orf85-202ENST00000377027 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
C9orf85-202ENST00000377027 KRTAP5-7Q6L8G8 165 aa3.2□□□□□ -1.9
C9orf85-202ENST00000377027 PSPHP1O15172 72 aa3.19□□□□□ -1.9
C9orf85-202ENST00000377027 LINC01558Q9Y6Z2 57 aa3.19□□□□□ -1.9
C9orf85-202ENST00000377027 A6NED7 52 aa3.18□□□□□ -1.9
C9orf85-202ENST00000377027 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
C9orf85-202ENST00000377027 TNP1P09430 55 aa3.15□□□□□ -1.91
C9orf85-202ENST00000377027 PRR15LQ9BU68 103 aa3.14□□□□□ -1.91
C9orf85-202ENST00000377027 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
C9orf85-202ENST00000377027 LCE1BQ5T7P3 118 aa3.13□□□□□ -1.91
C9orf85-202ENST00000377027 KRTAP12-3P60328 96 aa3.12□□□□□ -1.91
C9orf85-202ENST00000377027 SPRR5A0A1B0GTR4 108 aa3.1□□□□□ -1.91
C9orf85-202ENST00000377027 A0A1B0GU69 56 aa3.1□□□□□ -1.91
C9orf85-202ENST00000377027 SYNE1Q8NF91 8797 aaKnown RBP3.06□□□□□ -1.92
C9orf85-202ENST00000377027 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
C9orf85-202ENST00000377027 UQCR11O14957 56 aa3□□□□□ -1.93
C9orf85-202ENST00000377027 ROMO1P60602 79 aa2.98□□□□□ -1.93
C9orf85-202ENST00000377027 MIR22HGQ0VDD5 57 aa2.95□□□□□ -1.94
C9orf85-202ENST00000377027 KRTAP25-1Q3LHN0 102 aa2.92□□□□□ -1.94
C9orf85-202ENST00000377027 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
C9orf85-202ENST00000377027 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.95
C9orf85-202ENST00000377027 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
C9orf85-202ENST00000377027 MT1AP04731 61 aa2.86□□□□□ -1.95
C9orf85-202ENST00000377027 MUC5ACP98088 5654 aa2.83□□□□□ -1.96
C9orf85-202ENST00000377027 K7ERS5 55 aa2.83□□□□□ -1.96
C9orf85-202ENST00000377027 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
C9orf85-202ENST00000377027 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
C9orf85-202ENST00000377027 LUZP6Q538Z0 58 aa2.69□□□□□ -1.98
C9orf85-202ENST00000377027 MUC19Q7Z5P9 8384 aa2.5□□□□□ -2.01
C9orf85-202ENST00000377027 INE1O15225 51 aa2.42□□□□□ -2.02
C9orf85-202ENST00000377027 KRTAP21-2Q3LI59 83 aa2.22□□□□□ -2.05
C9orf85-202ENST00000377027 PHGR1C9JFL3 82 aa1.91□□□□□ -2.1
C9orf85-202ENST00000377027 KRTAP21-1Q3LI58 79 aa1.43□□□□□ -2.18
C9orf85-202ENST00000377027 PRM1P04553 51 aa1.37□□□□□ -2.19
C9orf85-202ENST00000377027 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 170.9 ms