RNA–Protein interactions for RNA: ENST00000376504.3

PTF1A-201, Transcript of pancreas associated transcription factor 1a, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTF1A, Length 1,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1A-201ENST00000376504 SPRR2BP35325 72 aa11.43□□□□□ -0.58
PTF1A-201ENST00000376504 SPRR2AP35326 72 aa11.43□□□□□ -0.58
PTF1A-201ENST00000376504 MT1LQ93083 61 aa11.4□□□□□ -0.58
PTF1A-201ENST00000376504 KRTAP19-3Q7Z4W3 81 aa11.37□□□□□ -0.59
PTF1A-201ENST00000376504 KRTAP15-1Q3LI76 137 aa11.32□□□□□ -0.6
PTF1A-201ENST00000376504 SVIPQ8NHG7 77 aa11.3□□□□□ -0.6
PTF1A-201ENST00000376504 LCE5AQ5TCM9 118 aa11.26□□□□□ -0.61
PTF1A-201ENST00000376504 NEBP20929 6669 aa11.24□□□□□ -0.61
PTF1A-201ENST00000376504 MT1GP13640 62 aa11.2□□□□□ -0.62
PTF1A-201ENST00000376504 MT1MQ8N339 61 aa11.08□□□□□ -0.64
PTF1A-201ENST00000376504 LOC100996750A0A140TA64 210 aa11.06□□□□□ -0.64
PTF1A-201ENST00000376504 KRTAP4-6Q9BYQ5 205 aa11.06□□□□□ -0.64
PTF1A-201ENST00000376504 SPRR2DP22532 72 aa11.03□□□□□ -0.64
PTF1A-201ENST00000376504 KRTAP19-4Q3LI73 84 aa11□□□□□ -0.65
PTF1A-201ENST00000376504 KRTAP4-7Q9BYR0 210 aa10.96□□□□□ -0.65
PTF1A-201ENST00000376504 LCE3CQ5T5A8 94 aa10.89□□□□□ -0.67
PTF1A-201ENST00000376504 KRTAP4-3Q9BYR4 195 aa10.84□□□□□ -0.67
PTF1A-201ENST00000376504 LCE3BQ5TA77 95 aa10.63□□□□□ -0.71
PTF1A-201ENST00000376504 KRTAP2-3P0C7H8 128 aa10.61□□□□□ -0.71
PTF1A-201ENST00000376504 KRTAP2-4Q9BYR9 128 aa10.61□□□□□ -0.71
PTF1A-201ENST00000376504 KRTAP20-1Q3LI63 56 aa10.58□□□□□ -0.72
PTF1A-201ENST00000376504 DSTQ03001 7570 aaKnown RBP10.56□□□□□ -0.72
PTF1A-201ENST00000376504 KRTAP2-2Q9BYT5 123 aa10.34□□□□□ -0.75
PTF1A-201ENST00000376504 KRTAP2-1Q9BYU5 128 aa10.34□□□□□ -0.75
PTF1A-201ENST00000376504 KRTAP9-6A8MVA2 160 aa10.33□□□□□ -0.76
PTF1A-201ENST00000376504 SPRR5A0A1B0GTR4 108 aa10.31□□□□□ -0.76
PTF1A-201ENST00000376504 KRTAP5-5Q701N2 237 aaPredicted RBP10.07□□□□□ -0.8
PTF1A-201ENST00000376504 KRTAP5-4Q6L8H1 288 aa9.89□□□□□ -0.83
PTF1A-201ENST00000376504 KRTAP4-12Q9BQ66 201 aa9.88□□□□□ -0.83
PTF1A-201ENST00000376504 LCE4AQ5TA78 99 aa9.8□□□□□ -0.84
PTF1A-201ENST00000376504 MT1AP04731 61 aa9.7□□□□□ -0.86
PTF1A-201ENST00000376504 KRTAP4-9Q9BYQ8 210 aa9.63□□□□□ -0.87
PTF1A-201ENST00000376504 KRTAP6-1Q3LI64 71 aa9.61□□□□□ -0.87
PTF1A-201ENST00000376504 MT4P47944 62 aa9.57□□□□□ -0.88
PTF1A-201ENST00000376504 KRTAP9-9Q9BYP9 154 aa9.56□□□□□ -0.88
PTF1A-201ENST00000376504 KRTAP9-4Q9BYQ2 154 aa9.56□□□□□ -0.88
PTF1A-201ENST00000376504 LUZP6Q538Z0 58 aa9.55□□□□□ -0.88
PTF1A-201ENST00000376504 LCE1DQ5T752 114 aa9.54□□□□□ -0.88
PTF1A-201ENST00000376504 SYNE1Q8NF91 8797 aaKnown RBP9.5□□□□□ -0.89
PTF1A-201ENST00000376504 KRTAP12-4P60329 112 aa9.43□□□□□ -0.9
PTF1A-201ENST00000376504 H3BS24 57 aa9.35□□□□□ -0.91
PTF1A-201ENST00000376504 HMCN1Q96RW7 5635 aa9.34□□□□□ -0.91
PTF1A-201ENST00000376504 KRTAP20-2Q3LI61 65 aa9.25□□□□□ -0.93
PTF1A-201ENST00000376504 KRTAP5-3Q6L8H2 238 aa8.95□□□□□ -0.98
PTF1A-201ENST00000376504 NDUFAF8A1L188 74 aa8.94□□□□□ -0.98
PTF1A-201ENST00000376504 KRTAP6-2Q3LI66 62 aa8.94□□□□□ -0.98
PTF1A-201ENST00000376504 KRTAP5-2Q701N4 177 aa8.88□□□□□ -0.99
PTF1A-201ENST00000376504 GPR98Q8WXG9 6306 aa8.81□□□□□ -1
PTF1A-201ENST00000376504 MT3P25713 68 aa8.79□□□□□ -1
PTF1A-201ENST00000376504 KRTAP4-2Q9BYR5 136 aa8.63□□□□□ -1.03
PTF1A-201ENST00000376504 AHNAK2Q8IVF2 5795 aa8.62□□□□□ -1.03
PTF1A-201ENST00000376504 KRTAP4-11Q9BYQ6 195 aa8.56□□□□□ -1.04
PTF1A-201ENST00000376504 KRTAP5-10Q6L8G5 202 aa8.27□□□□□ -1.09
PTF1A-201ENST00000376504 LCE3DQ9BYE3 92 aa8.07□□□□□ -1.12
PTF1A-201ENST00000376504 OBSCNQ5VST9 7968 aa8.05□□□□□ -1.12
PTF1A-201ENST00000376504 KRTAP5-8O75690 187 aa7.88□□□□□ -1.15
PTF1A-201ENST00000376504 LCE3EQ5T5B0 92 aa7.78□□□□□ -1.16
PTF1A-201ENST00000376504 LCE1EQ5T753 118 aa7.78□□□□□ -1.16
PTF1A-201ENST00000376504 KRTAP5-7Q6L8G8 165 aa7.76□□□□□ -1.17
PTF1A-201ENST00000376504 KRTAP5-1Q6L8H4 278 aa7.75□□□□□ -1.17
PTF1A-201ENST00000376504 A0A0A0MQY5 61 aa7.65□□□□□ -1.18
PTF1A-201ENST00000376504 MUC5ACP98088 5654 aa7.47□□□□□ -1.21
PTF1A-201ENST00000376504 INE1O15225 51 aa7.33□□□□□ -1.24
PTF1A-201ENST00000376504 LCE1BQ5T7P3 118 aa7.27□□□□□ -1.25
PTF1A-201ENST00000376504 LCE1CQ5T751 118 aa7.24□□□□□ -1.25
PTF1A-201ENST00000376504 MUC5BQ9HC84 5762 aaPredicted RBP6.88□□□□□ -1.31
PTF1A-201ENST00000376504 AHNAKQ09666 5890 aaKnown RBP6.75□□□□□ -1.33
PTF1A-201ENST00000376504 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.75□□□□□ -1.33
PTF1A-201ENST00000376504 PRM1P04553 51 aa6.52□□□□□ -1.37
PTF1A-201ENST00000376504 KRTAP5-11Q6L8G4 156 aa6.46□□□□□ -1.37
PTF1A-201ENST00000376504 KRTAP21-2Q3LI59 83 aa6.32□□□□□ -1.4
PTF1A-201ENST00000376504 LCE1FQ5T754 118 aa5.96□□□□□ -1.46
PTF1A-201ENST00000376504 KRTAP4-4Q9BYR3 166 aa5.64□□□□□ -1.51
PTF1A-201ENST00000376504 PHGR1C9JFL3 82 aa5.54□□□□□ -1.52
PTF1A-201ENST00000376504 MUC19Q7Z5P9 8384 aa4.88□□□□□ -1.63
PTF1A-201ENST00000376504 KRTAP21-1Q3LI58 79 aa3.88□□□□□ -1.79
PTF1A-201ENST00000376504 MUC16Q8WXI7 14507 aa3.59□□□□□ -1.83
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms