RNA–Protein interactions for RNA: ENST00000376237.8

HLA-C-202, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,538 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-202ENST00000376237 LCE1AQ5T7P2 110 aa8.25□□□□□ -1.09
HLA-C-202ENST00000376237 SPRR2EP22531 72 aa8.24□□□□□ -1.09
HLA-C-202ENST00000376237 SPRR2BP35325 72 aa8.24□□□□□ -1.09
HLA-C-202ENST00000376237 SPRR2AP35326 72 aa8.24□□□□□ -1.09
HLA-C-202ENST00000376237 KRTAP20-1Q3LI63 56 aa8.23□□□□□ -1.09
HLA-C-202ENST00000376237 KRTAP19-3Q7Z4W3 81 aa8.2□□□□□ -1.1
HLA-C-202ENST00000376237 MT1LQ93083 61 aa8.19□□□□□ -1.1
HLA-C-202ENST00000376237 KRTAP15-1Q3LI76 137 aa8.18□□□□□ -1.1
HLA-C-202ENST00000376237 MT1GP13640 62 aa8.12□□□□□ -1.11
HLA-C-202ENST00000376237 LCE5AQ5TCM9 118 aa8.1□□□□□ -1.11
HLA-C-202ENST00000376237 KRTAP19-4Q3LI73 84 aa8.09□□□□□ -1.11
HLA-C-202ENST00000376237 KRTAP2-3P0C7H8 128 aa7.99□□□□□ -1.13
HLA-C-202ENST00000376237 KRTAP2-4Q9BYR9 128 aa7.99□□□□□ -1.13
HLA-C-202ENST00000376237 SPRR2DP22532 72 aa7.95□□□□□ -1.14
HLA-C-202ENST00000376237 MT1MQ8N339 61 aa7.95□□□□□ -1.14
HLA-C-202ENST00000376237 SVIPQ8NHG7 77 aa7.94□□□□□ -1.14
HLA-C-202ENST00000376237 LCE3CQ5T5A8 94 aa7.86□□□□□ -1.15
HLA-C-202ENST00000376237 KRTAP4-7Q9BYR0 210 aa7.8□□□□□ -1.16
HLA-C-202ENST00000376237 KRTAP2-2Q9BYT5 123 aa7.75□□□□□ -1.17
HLA-C-202ENST00000376237 KRTAP2-1Q9BYU5 128 aa7.75□□□□□ -1.17
HLA-C-202ENST00000376237 KRTAP4-3Q9BYR4 195 aa7.7□□□□□ -1.18
HLA-C-202ENST00000376237 LCE3BQ5TA77 95 aa7.68□□□□□ -1.18
HLA-C-202ENST00000376237 DSTQ03001 7570 aaKnown RBP7.56□□□□□ -1.2
HLA-C-202ENST00000376237 SPRR5A0A1B0GTR4 108 aa7.41□□□□□ -1.22
HLA-C-202ENST00000376237 KRTAP9-6A8MVA2 160 aa7.35□□□□□ -1.23
HLA-C-202ENST00000376237 LOC100996750A0A140TA64 210 aa7.34□□□□□ -1.23
HLA-C-202ENST00000376237 KRTAP5-5Q701N2 237 aaPredicted RBP7.22□□□□□ -1.25
HLA-C-202ENST00000376237 LCE4AQ5TA78 99 aa7.11□□□□□ -1.27
HLA-C-202ENST00000376237 KRTAP5-4Q6L8H1 288 aa7.11□□□□□ -1.27
HLA-C-202ENST00000376237 KRTAP4-9Q9BYQ8 210 aa7.06□□□□□ -1.28
HLA-C-202ENST00000376237 LUZP6Q538Z0 58 aa7□□□□□ -1.29
HLA-C-202ENST00000376237 MT1AP04731 61 aa6.98□□□□□ -1.29
HLA-C-202ENST00000376237 LCE1DQ5T752 114 aa6.91□□□□□ -1.3
HLA-C-202ENST00000376237 GPR98Q8WXG9 6306 aa6.88□□□□□ -1.31
HLA-C-202ENST00000376237 MT4P47944 62 aa6.88□□□□□ -1.31
HLA-C-202ENST00000376237 KRTAP6-1Q3LI64 71 aa6.87□□□□□ -1.31
HLA-C-202ENST00000376237 KRTAP12-4P60329 112 aa6.86□□□□□ -1.31
HLA-C-202ENST00000376237 HMCN1Q96RW7 5635 aa6.79□□□□□ -1.32
HLA-C-202ENST00000376237 KRTAP4-6Q9BYQ5 205 aa6.78□□□□□ -1.32
HLA-C-202ENST00000376237 SYNE1Q8NF91 8797 aaKnown RBP6.74□□□□□ -1.33
HLA-C-202ENST00000376237 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
HLA-C-202ENST00000376237 KRTAP20-2Q3LI61 65 aa6.66□□□□□ -1.34
HLA-C-202ENST00000376237 AHNAK2Q8IVF2 5795 aa6.51□□□□□ -1.37
HLA-C-202ENST00000376237 KRTAP5-10Q6L8G5 202 aa6.44□□□□□ -1.38
HLA-C-202ENST00000376237 KRTAP5-3Q6L8H2 238 aa6.43□□□□□ -1.38
HLA-C-202ENST00000376237 NDUFAF8A1L188 74 aa6.42□□□□□ -1.38
HLA-C-202ENST00000376237 KRTAP6-2Q3LI66 62 aa6.41□□□□□ -1.38
HLA-C-202ENST00000376237 MT3P25713 68 aa6.38□□□□□ -1.39
HLA-C-202ENST00000376237 KRTAP5-2Q701N4 177 aa6.37□□□□□ -1.39
HLA-C-202ENST00000376237 KRTAP5-7Q6L8G8 165 aa6.2□□□□□ -1.42
HLA-C-202ENST00000376237 KRTAP4-11Q9BYQ6 195 aa5.89□□□□□ -1.47
HLA-C-202ENST00000376237 LCE3DQ9BYE3 92 aa5.84□□□□□ -1.47
HLA-C-202ENST00000376237 OBSCNQ5VST9 7968 aa5.78□□□□□ -1.48
HLA-C-202ENST00000376237 LCE1EQ5T753 118 aa5.67□□□□□ -1.5
HLA-C-202ENST00000376237 KRTAP5-8O75690 187 aa5.65□□□□□ -1.5
HLA-C-202ENST00000376237 LCE3EQ5T5B0 92 aa5.64□□□□□ -1.51
HLA-C-202ENST00000376237 A0A0A0MQY5 61 aa5.59□□□□□ -1.51
HLA-C-202ENST00000376237 KRTAP5-1Q6L8H4 278 aa5.56□□□□□ -1.52
HLA-C-202ENST00000376237 KRTAP4-12Q9BQ66 201 aa5.53□□□□□ -1.52
HLA-C-202ENST00000376237 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
HLA-C-202ENST00000376237 H3BS24 57 aa5.38□□□□□ -1.55
HLA-C-202ENST00000376237 INE1O15225 51 aa5.37□□□□□ -1.55
HLA-C-202ENST00000376237 KRTAP9-9Q9BYP9 154 aa5.36□□□□□ -1.55
HLA-C-202ENST00000376237 MUC5ACP98088 5654 aa5.36□□□□□ -1.55
HLA-C-202ENST00000376237 AHNAKQ09666 5890 aaKnown RBP5.3□□□□□ -1.56
HLA-C-202ENST00000376237 LCE1CQ5T751 118 aa5.26□□□□□ -1.57
HLA-C-202ENST00000376237 LCE1BQ5T7P3 118 aa5.26□□□□□ -1.57
HLA-C-202ENST00000376237 KRTAP4-2Q9BYR5 136 aa5.23□□□□□ -1.57
HLA-C-202ENST00000376237 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.87□□□□□ -1.63
HLA-C-202ENST00000376237 PRM1P04553 51 aa4.67□□□□□ -1.66
HLA-C-202ENST00000376237 KRTAP5-11Q6L8G4 156 aa4.67□□□□□ -1.66
HLA-C-202ENST00000376237 KRTAP21-2Q3LI59 83 aa4.52□□□□□ -1.69
HLA-C-202ENST00000376237 LCE1FQ5T754 118 aa4.37□□□□□ -1.71
HLA-C-202ENST00000376237 PHGR1C9JFL3 82 aa4□□□□□ -1.77
HLA-C-202ENST00000376237 KRTAP4-4Q9BYR3 166 aa3.99□□□□□ -1.77
HLA-C-202ENST00000376237 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
HLA-C-202ENST00000376237 KRTAP21-1Q3LI58 79 aa2.84□□□□□ -1.95
HLA-C-202ENST00000376237 MUC16Q8WXI7 14507 aa2.53□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 11.4 ms