RNA–Protein interactions for RNA: ENST00000376061.8

PDPN-203, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-203ENST00000376061 C10orf95Q9H7T3 257 aa4.31□□□□□ -1.72
PDPN-203ENST00000376061 PRO2289Q9P1D8 64 aa4.3□□□□□ -1.72
PDPN-203ENST00000376061 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
PDPN-203ENST00000376061 LCE1AQ5T7P2 110 aa4.27□□□□□ -1.73
PDPN-203ENST00000376061 TNP1P09430 55 aa4.18□□□□□ -1.74
PDPN-203ENST00000376061 KRTAP10-12P60413 245 aa4.14□□□□□ -1.75
PDPN-203ENST00000376061 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
PDPN-203ENST00000376061 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
PDPN-203ENST00000376061 KRTAP2-2Q9BYT5 123 aa4.08□□□□□ -1.76
PDPN-203ENST00000376061 LCE3AQ5TA76 89 aa4.05□□□□□ -1.76
PDPN-203ENST00000376061 KRTAP5-1Q6L8H4 278 aa4.02□□□□□ -1.77
PDPN-203ENST00000376061 PP632Q6XCG6 107 aa4□□□□□ -1.77
PDPN-203ENST00000376061 KRTAP8-1Q8IUC2 63 aa3.96□□□□□ -1.78
PDPN-203ENST00000376061 KMT2DO14686 5537 aa3.95□□□□□ -1.78
PDPN-203ENST00000376061 KRTAP5-9P26371 169 aa3.95□□□□□ -1.78
PDPN-203ENST00000376061 MACF1Q9UPN3 7388 aaKnown RBP3.94□□□□□ -1.78
PDPN-203ENST00000376061 KRTAP5-4Q6L8H1 288 aa3.93□□□□□ -1.78
PDPN-203ENST00000376061 KRTAP19-5Q3LI72 72 aa3.91□□□□□ -1.78
PDPN-203ENST00000376061 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.78
PDPN-203ENST00000376061 KRTAP19-7Q3SYF9 63 aa3.89□□□□□ -1.79
PDPN-203ENST00000376061 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
PDPN-203ENST00000376061 SYNE2Q8WXH0 6885 aaKnown RBP3.88□□□□□ -1.79
PDPN-203ENST00000376061 MT1EP04732 61 aa3.84□□□□□ -1.79
PDPN-203ENST00000376061 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
PDPN-203ENST00000376061 KRTAP6-3Q3LI67 103 aa3.79□□□□□ -1.8
PDPN-203ENST00000376061 MT3P25713 68 aa3.75□□□□□ -1.81
PDPN-203ENST00000376061 MT1LQ93083 61 aa3.74□□□□□ -1.81
PDPN-203ENST00000376061 MUC12Q9UKN1 5478 aa3.71□□□□□ -1.82
PDPN-203ENST00000376061 KRTAP19-3Q7Z4W3 81 aa3.7□□□□□ -1.82
PDPN-203ENST00000376061 SPRR2EP22531 72 aa3.66□□□□□ -1.82
PDPN-203ENST00000376061 SPRR2BP35325 72 aa3.66□□□□□ -1.82
PDPN-203ENST00000376061 SPRR2AP35326 72 aa3.66□□□□□ -1.82
PDPN-203ENST00000376061 INE1O15225 51 aa3.65□□□□□ -1.82
PDPN-203ENST00000376061 MT1GP13640 62 aa3.63□□□□□ -1.83
PDPN-203ENST00000376061 NEBP20929 6669 aa3.62□□□□□ -1.83
PDPN-203ENST00000376061 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
PDPN-203ENST00000376061 MT1MQ8N339 61 aa3.62□□□□□ -1.83
PDPN-203ENST00000376061 MDN1Q9NU22 5596 aa3.58□□□□□ -1.84
PDPN-203ENST00000376061 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
PDPN-203ENST00000376061 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
PDPN-203ENST00000376061 KRTAP4-3Q9BYR4 195 aa3.54□□□□□ -1.84
PDPN-203ENST00000376061 SPRR2DP22532 72 aa3.53□□□□□ -1.84
PDPN-203ENST00000376061 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
PDPN-203ENST00000376061 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
PDPN-203ENST00000376061 OBSCNQ5VST9 7968 aa3.44□□□□□ -1.86
PDPN-203ENST00000376061 KRTAP2-3P0C7H8 128 aa3.43□□□□□ -1.86
PDPN-203ENST00000376061 KRTAP2-4Q9BYR9 128 aa3.43□□□□□ -1.86
PDPN-203ENST00000376061 DSTQ03001 7570 aaKnown RBP3.35□□□□□ -1.87
PDPN-203ENST00000376061 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
PDPN-203ENST00000376061 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
PDPN-203ENST00000376061 KRTAP5-5Q701N2 237 aaPredicted RBP3.28□□□□□ -1.88
PDPN-203ENST00000376061 MT1AP04731 61 aa3.18□□□□□ -1.9
PDPN-203ENST00000376061 KRTAP6-1Q3LI64 71 aa3.15□□□□□ -1.9
PDPN-203ENST00000376061 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
PDPN-203ENST00000376061 MT4P47944 62 aa3.06□□□□□ -1.92
PDPN-203ENST00000376061 KRTAP12-4P60329 112 aa3.04□□□□□ -1.92
PDPN-203ENST00000376061 SYNE1Q8NF91 8797 aaKnown RBP3.01□□□□□ -1.93
PDPN-203ENST00000376061 KRTAP20-2Q3LI61 65 aa2.98□□□□□ -1.93
PDPN-203ENST00000376061 HMCN1Q96RW7 5635 aa2.95□□□□□ -1.94
PDPN-203ENST00000376061 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
PDPN-203ENST00000376061 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
PDPN-203ENST00000376061 KRTAP5-8O75690 187 aa2.81□□□□□ -1.96
PDPN-203ENST00000376061 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
PDPN-203ENST00000376061 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
PDPN-203ENST00000376061 LCE3DQ9BYE3 92 aa2.7□□□□□ -1.98
PDPN-203ENST00000376061 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
PDPN-203ENST00000376061 LCE1CQ5T751 118 aa2.65□□□□□ -1.98
PDPN-203ENST00000376061 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.98
PDPN-203ENST00000376061 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
PDPN-203ENST00000376061 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
PDPN-203ENST00000376061 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.05
PDPN-203ENST00000376061 MUC19Q7Z5P9 8384 aa2.25□□□□□ -2.05
PDPN-203ENST00000376061 PRM1P04553 51 aa2.23□□□□□ -2.05
PDPN-203ENST00000376061 KRTAP21-2Q3LI59 83 aa2.07□□□□□ -2.08
PDPN-203ENST00000376061 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
PDPN-203ENST00000376061 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
PDPN-203ENST00000376061 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 36 ms