RNA–Protein interactions for RNA: ENST00000374676.4

HSPG2-202, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-202ENST00000374676 KRTAP20-1Q3LI63 56 aa4.1□□□□□ -1.75
HSPG2-202ENST00000374676 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
HSPG2-202ENST00000374676 KRTAP2-3P0C7H8 128 aa4.09□□□□□ -1.75
HSPG2-202ENST00000374676 KRTAP12-3P60328 96 aa4.09□□□□□ -1.75
HSPG2-202ENST00000374676 KRTAP2-4Q9BYR9 128 aa4.09□□□□□ -1.75
HSPG2-202ENST00000374676 MT1GP13640 62 aa4.07□□□□□ -1.76
HSPG2-202ENST00000374676 MT1LQ93083 61 aa4.06□□□□□ -1.76
HSPG2-202ENST00000374676 PP632Q6XCG6 107 aa4.02□□□□□ -1.77
HSPG2-202ENST00000374676 MT1MQ8N339 61 aa3.99□□□□□ -1.77
HSPG2-202ENST00000374676 LCE3BQ5TA77 95 aa3.98□□□□□ -1.77
HSPG2-202ENST00000374676 KRTAP2-2Q9BYT5 123 aa3.97□□□□□ -1.77
HSPG2-202ENST00000374676 KRTAP2-1Q9BYU5 128 aa3.97□□□□□ -1.77
HSPG2-202ENST00000374676 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
HSPG2-202ENST00000374676 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
HSPG2-202ENST00000374676 DSTQ03001 7570 aaKnown RBP3.92□□□□□ -1.78
HSPG2-202ENST00000374676 PMAIP1Q13794 54 aa3.9□□□□□ -1.79
HSPG2-202ENST00000374676 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
HSPG2-202ENST00000374676 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
HSPG2-202ENST00000374676 PRO0628Q9UI54 55 aa3.84□□□□□ -1.79
HSPG2-202ENST00000374676 LCE3CQ5T5A8 94 aa3.8□□□□□ -1.8
HSPG2-202ENST00000374676 LCE4AQ5TA78 99 aa3.68□□□□□ -1.82
HSPG2-202ENST00000374676 KRTAP5-4Q6L8H1 288 aa3.67□□□□□ -1.82
HSPG2-202ENST00000374676 PRAC1Q96KF2 57 aa3.67□□□□□ -1.82
HSPG2-202ENST00000374676 LOC100996750A0A140TA64 210 aa3.64□□□□□ -1.83
HSPG2-202ENST00000374676 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
HSPG2-202ENST00000374676 KRTAP4-9Q9BYQ8 210 aa3.62□□□□□ -1.83
HSPG2-202ENST00000374676 KTN1-AS1Q86SY8 53 aa3.61□□□□□ -1.83
HSPG2-202ENST00000374676 LCE1DQ5T752 114 aa3.58□□□□□ -1.84
HSPG2-202ENST00000374676 KRTAP9-6A8MVA2 160 aa3.57□□□□□ -1.84
HSPG2-202ENST00000374676 MT4P47944 62 aa3.56□□□□□ -1.84
HSPG2-202ENST00000374676 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
HSPG2-202ENST00000374676 KRTAP4-6Q9BYQ5 205 aa3.5□□□□□ -1.85
HSPG2-202ENST00000374676 SYNE1Q8NF91 8797 aaKnown RBP3.48□□□□□ -1.85
HSPG2-202ENST00000374676 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
HSPG2-202ENST00000374676 MT1AP04731 61 aa3.47□□□□□ -1.85
HSPG2-202ENST00000374676 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
HSPG2-202ENST00000374676 KRTAP20-2Q3LI61 65 aa3.42□□□□□ -1.86
HSPG2-202ENST00000374676 KRTAP6-1Q3LI64 71 aa3.42□□□□□ -1.86
HSPG2-202ENST00000374676 SVIPQ8NHG7 77 aa3.38□□□□□ -1.87
HSPG2-202ENST00000374676 KRTAP9-4Q9BYQ2 154 aa3.33□□□□□ -1.88
HSPG2-202ENST00000374676 AHNAK2Q8IVF2 5795 aa3.32□□□□□ -1.88
HSPG2-202ENST00000374676 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
HSPG2-202ENST00000374676 GPR98Q8WXG9 6306 aa3.31□□□□□ -1.88
HSPG2-202ENST00000374676 KRTAP5-2Q701N4 177 aa3.25□□□□□ -1.89
HSPG2-202ENST00000374676 KRTAP6-2Q3LI66 62 aa3.21□□□□□ -1.9
HSPG2-202ENST00000374676 KRTAP5-10Q6L8G5 202 aa3.2□□□□□ -1.9
HSPG2-202ENST00000374676 MT3P25713 68 aa3.17□□□□□ -1.9
HSPG2-202ENST00000374676 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
HSPG2-202ENST00000374676 KRTAP4-11Q9BYQ6 195 aa3.07□□□□□ -1.92
HSPG2-202ENST00000374676 KRTAP5-7Q6L8G8 165 aa3.05□□□□□ -1.92
HSPG2-202ENST00000374676 OBSCNQ5VST9 7968 aa2.97□□□□□ -1.93
HSPG2-202ENST00000374676 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
HSPG2-202ENST00000374676 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
HSPG2-202ENST00000374676 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
HSPG2-202ENST00000374676 KRTAP5-1Q6L8H4 278 aa2.86□□□□□ -1.95
HSPG2-202ENST00000374676 LCE3DQ9BYE3 92 aa2.79□□□□□ -1.96
HSPG2-202ENST00000374676 KRTAP9-9Q9BYP9 154 aa2.75□□□□□ -1.97
HSPG2-202ENST00000374676 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
HSPG2-202ENST00000374676 NDUFAF8A1L188 74 aa2.7□□□□□ -1.98
HSPG2-202ENST00000374676 AHNAKQ09666 5890 aaKnown RBP2.7□□□□□ -1.98
HSPG2-202ENST00000374676 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
HSPG2-202ENST00000374676 KRTAP4-2Q9BYR5 136 aa2.66□□□□□ -1.98
HSPG2-202ENST00000374676 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
HSPG2-202ENST00000374676 LCE1BQ5T7P3 118 aa2.64□□□□□ -1.99
HSPG2-202ENST00000374676 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.45□□□□□ -2.02
HSPG2-202ENST00000374676 KRTAP5-11Q6L8G4 156 aa2.36□□□□□ -2.03
HSPG2-202ENST00000374676 A0A0A0MQY5 61 aa2.29□□□□□ -2.04
HSPG2-202ENST00000374676 KRTAP4-12Q9BQ66 201 aa2.28□□□□□ -2.04
HSPG2-202ENST00000374676 INE1O15225 51 aa2.26□□□□□ -2.05
HSPG2-202ENST00000374676 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
HSPG2-202ENST00000374676 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
HSPG2-202ENST00000374676 PRM1P04553 51 aa2.13□□□□□ -2.07
HSPG2-202ENST00000374676 PHGR1C9JFL3 82 aa2.03□□□□□ -2.08
HSPG2-202ENST00000374676 KRTAP4-4Q9BYR3 166 aa2□□□□□ -2.09
HSPG2-202ENST00000374676 H3BS24 57 aa1.92□□□□□ -2.1
HSPG2-202ENST00000374676 MUC19Q7Z5P9 8384 aa1.84□□□□□ -2.12
HSPG2-202ENST00000374676 KRTAP21-1Q3LI58 79 aa1.4□□□□□ -2.19
HSPG2-202ENST00000374676 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms