RNA–Protein interactions for RNA: ENST00000374617.8

WDR46-231, Transcript of WD repeat domain 46, human

APPRIS P1 TSL 1 (best) BASIC

Gene WDR46, Length 2,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR46-231	ENST00000374617	SPRR2B	P35325	72 aa		5.22	□□□□□ -1.57
WDR46-231	ENST00000374617	SPRR2A	P35326	72 aa		5.22	□□□□□ -1.57
WDR46-231	ENST00000374617	LCE3A	Q5TA76	89 aa		5.21	□□□□□ -1.57
WDR46-231	ENST00000374617	LCE1A	Q5T7P2	110 aa		5.2	□□□□□ -1.58
WDR46-231	ENST00000374617	SPRR5	A0A1B0GTR4	108 aa		5.16	□□□□□ -1.58
WDR46-231	ENST00000374617	KRTAP23-1	A1A580	65 aa		5.15	□□□□□ -1.58
WDR46-231	ENST00000374617	KRTAP19-7	Q3SYF9	63 aa		5.15	□□□□□ -1.59
WDR46-231	ENST00000374617	MT1E	P04732	61 aa		5.09	□□□□□ -1.59
WDR46-231	ENST00000374617	KRTAP19-5	Q3LI72	72 aa		5.09	□□□□□ -1.59
WDR46-231	ENST00000374617	KRTAP20-1	Q3LI63	56 aa		5.08	□□□□□ -1.6
WDR46-231	ENST00000374617	KRTAP2-3	P0C7H8	128 aa		5.05	□□□□□ -1.6
WDR46-231	ENST00000374617	SPRR2D	P22532	72 aa		5.05	□□□□□ -1.6
WDR46-231	ENST00000374617	KRTAP2-4	Q9BYR9	128 aa		5.05	□□□□□ -1.6
WDR46-231	ENST00000374617	KRTAP12-3	P60328	96 aa		5.01	□□□□□ -1.61
WDR46-231	ENST00000374617	KRTAP19-3	Q7Z4W3	81 aa		5.01	□□□□□ -1.61
WDR46-231	ENST00000374617	LCE5A	Q5TCM9	118 aa		4.99	□□□□□ -1.61
WDR46-231	ENST00000374617	MT1G	P13640	62 aa		4.94	□□□□□ -1.62
WDR46-231	ENST00000374617	MT1L	Q93083	61 aa		4.91	□□□□□ -1.62
WDR46-231	ENST00000374617	KRTAP2-2	Q9BYT5	123 aa		4.9	□□□□□ -1.62
WDR46-231	ENST00000374617	KRTAP2-1	Q9BYU5	128 aa		4.9	□□□□□ -1.62
WDR46-231	ENST00000374617	LCE3B	Q5TA77	95 aa		4.89	□□□□□ -1.63
WDR46-231	ENST00000374617	MT1M	Q8N339	61 aa		4.83	□□□□□ -1.64
WDR46-231	ENST00000374617	INE1	O15225	51 aa		4.77	□□□□□ -1.65
WDR46-231	ENST00000374617	KRTAP19-4	Q3LI73	84 aa		4.77	□□□□□ -1.65
WDR46-231	ENST00000374617	DST	Q03001	7570 aa	Known RBP	4.72	□□□□□ -1.65
WDR46-231	ENST00000374617	KRTAP4-7	Q9BYR0	210 aa		4.71	□□□□□ -1.66
WDR46-231	ENST00000374617	LCE3C	Q5T5A8	94 aa		4.67	□□□□□ -1.66
WDR46-231	ENST00000374617	KRTAP4-3	Q9BYR4	195 aa		4.65	□□□□□ -1.66
WDR46-231	ENST00000374617	LCE4A	Q5TA78	99 aa		4.51	□□□□□ -1.69
WDR46-231	ENST00000374617	KRTAP5-4	Q6L8H1	288 aa		4.47	□□□□□ -1.69
WDR46-231	ENST00000374617	KRTAP4-9	Q9BYQ8	210 aa		4.45	□□□□□ -1.7
WDR46-231	ENST00000374617	LOC100996750	A0A140TA64	210 aa		4.43	□□□□□ -1.7
WDR46-231	ENST00000374617	KRTAP9-6	A8MVA2	160 aa		4.43	□□□□□ -1.7
WDR46-231	ENST00000374617	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.42	□□□□□ -1.7
WDR46-231	ENST00000374617	LCE1D	Q5T752	114 aa		4.4	□□□□□ -1.71
WDR46-231	ENST00000374617	MT4	P47944	62 aa		4.37	□□□□□ -1.71
WDR46-231	ENST00000374617	HMCN1	Q96RW7	5635 aa		4.29	□□□□□ -1.72
WDR46-231	ENST00000374617	KRTAP4-6	Q9BYQ5	205 aa		4.28	□□□□□ -1.72
WDR46-231	ENST00000374617	KRTAP12-4	P60329	112 aa		4.26	□□□□□ -1.73
WDR46-231	ENST00000374617	MT1A	P04731	61 aa		4.19	□□□□□ -1.74
WDR46-231	ENST00000374617	KRTAP20-2	Q3LI61	65 aa		4.18	□□□□□ -1.74
WDR46-231	ENST00000374617	SYNE1	Q8NF91	8797 aa	Known RBP	4.14	□□□□□ -1.75
WDR46-231	ENST00000374617	KRTAP6-1	Q3LI64	71 aa		4.13	□□□□□ -1.75
WDR46-231	ENST00000374617	KRTAP5-3	Q6L8H2	238 aa		4.06	□□□□□ -1.76
WDR46-231	ENST00000374617	KRTAP9-4	Q9BYQ2	154 aa		4.04	□□□□□ -1.76
WDR46-231	ENST00000374617	GPR98	Q8WXG9	6306 aa		4.01	□□□□□ -1.77
WDR46-231	ENST00000374617	AHNAK2	Q8IVF2	5795 aa		4	□□□□□ -1.77
WDR46-231	ENST00000374617	KRTAP5-10	Q6L8G5	202 aa		3.96	□□□□□ -1.78
WDR46-231	ENST00000374617	KRTAP5-2	Q701N4	177 aa		3.96	□□□□□ -1.78
WDR46-231	ENST00000374617	KRTAP6-2	Q3LI66	62 aa		3.9	□□□□□ -1.79
WDR46-231	ENST00000374617	MT3	P25713	68 aa		3.84	□□□□□ -1.79
WDR46-231	ENST00000374617	KRTAP5-7	Q6L8G8	165 aa		3.78	□□□□□ -1.8
WDR46-231	ENST00000374617	KRTAP4-11	Q9BYQ6	195 aa		3.76	□□□□□ -1.81
WDR46-231	ENST00000374617	KRTAP5-8	O75690	187 aa		3.62	□□□□□ -1.83
WDR46-231	ENST00000374617	OBSCN	Q5VST9	7968 aa		3.62	□□□□□ -1.83
WDR46-231	ENST00000374617	KRTAP5-1	Q6L8H4	278 aa		3.49	□□□□□ -1.85
WDR46-231	ENST00000374617	LCE1E	Q5T753	118 aa		3.49	□□□□□ -1.85
WDR46-231	ENST00000374617	LCE3D	Q9BYE3	92 aa		3.46	□□□□□ -1.86
WDR46-231	ENST00000374617	KRTAP9-9	Q9BYP9	154 aa		3.4	□□□□□ -1.86
WDR46-231	ENST00000374617	LCE3E	Q5T5B0	92 aa		3.39	□□□□□ -1.87
WDR46-231	ENST00000374617	PRM1	P04553	51 aa		3.37	□□□□□ -1.87
WDR46-231	ENST00000374617	MUC5AC	P98088	5654 aa		3.36	□□□□□ -1.87
WDR46-231	ENST00000374617	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.27	□□□□□ -1.89
WDR46-231	ENST00000374617	LCE1C	Q5T751	118 aa		3.23	□□□□□ -1.89
WDR46-231	ENST00000374617	LCE1B	Q5T7P3	118 aa		3.23	□□□□□ -1.89
WDR46-231	ENST00000374617	KRTAP4-2	Q9BYR5	136 aa		3.22	□□□□□ -1.89
WDR46-231	ENST00000374617	AHNAK	Q09666	5890 aa	Known RBP	3.2	□□□□□ -1.9
WDR46-231	ENST00000374617	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.98	□□□□□ -1.93
WDR46-231	ENST00000374617	KRTAP5-11	Q6L8G4	156 aa		2.89	□□□□□ -1.95
WDR46-231	ENST00000374617	KRTAP4-12	Q9BQ66	201 aa		2.79	□□□□□ -1.96
WDR46-231	ENST00000374617	LCE1F	Q5T754	118 aa		2.78	□□□□□ -1.96
WDR46-231	ENST00000374617	KRTAP21-2	Q3LI59	83 aa		2.73	□□□□□ -1.97
WDR46-231	ENST00000374617	PHGR1	C9JFL3	82 aa		2.48	□□□□□ -2.01
WDR46-231	ENST00000374617	KRTAP4-4	Q9BYR3	166 aa		2.43	□□□□□ -2.02
WDR46-231	ENST00000374617	MUC19	Q7Z5P9	8384 aa		2.19	□□□□□ -2.06
WDR46-231	ENST00000374617	KRTAP21-1	Q3LI58	79 aa		2.16	□□□□□ -2.06
WDR46-231	ENST00000374617	MUC16	Q8WXI7	14507 aa		1.58	□□□□□ -2.16

Retrieved 77 of 20,778 RNA–protein pairs in 108.2 ms