RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 SYNE2Q8WXH0 6885 aaKnown RBP4.53□□□□□ -1.68
PRPF4-201ENST00000374198 KRTAP6-3Q3LI67 103 aa4.44□□□□□ -1.7
PRPF4-201ENST00000374198 KRTAP4-7Q9BYR0 210 aa4.41□□□□□ -1.7
PRPF4-201ENST00000374198 KRTAP4-8A0A0G2JLE6 195 aa4.35□□□□□ -1.71
PRPF4-201ENST00000374198 KRTAP4-8Q9BYQ9 185 aa4.35□□□□□ -1.71
PRPF4-201ENST00000374198 KRTAP19-4Q3LI73 84 aa4.31□□□□□ -1.72
PRPF4-201ENST00000374198 KRTAP19-7Q3SYF9 63 aa4.31□□□□□ -1.72
PRPF4-201ENST00000374198 KMT2DO14686 5537 aa4.3□□□□□ -1.72
PRPF4-201ENST00000374198 KRTAP5-9P26371 169 aa4.26□□□□□ -1.73
PRPF4-201ENST00000374198 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
PRPF4-201ENST00000374198 NEBP20929 6669 aa4.23□□□□□ -1.73
PRPF4-201ENST00000374198 SPRR2FQ96RM1 72 aa4.23□□□□□ -1.73
PRPF4-201ENST00000374198 MT1LQ93083 61 aa4.22□□□□□ -1.73
PRPF4-201ENST00000374198 MUC12Q9UKN1 5478 aa4.22□□□□□ -1.73
PRPF4-201ENST00000374198 MT1EP04732 61 aa4.14□□□□□ -1.75
PRPF4-201ENST00000374198 SPRR2EP22531 72 aa4.14□□□□□ -1.75
PRPF4-201ENST00000374198 SPRR2BP35325 72 aa4.14□□□□□ -1.75
PRPF4-201ENST00000374198 SPRR2AP35326 72 aa4.14□□□□□ -1.75
PRPF4-201ENST00000374198 MDN1Q9NU22 5596 aa4.12□□□□□ -1.75
PRPF4-201ENST00000374198 KRTAP20-1Q3LI63 56 aa4.09□□□□□ -1.75
PRPF4-201ENST00000374198 LOC100996750A0A140TA64 210 aa4.08□□□□□ -1.76
PRPF4-201ENST00000374198 LCE1AQ5T7P2 110 aa4.06□□□□□ -1.76
PRPF4-201ENST00000374198 MT1GP13640 62 aa4□□□□□ -1.77
PRPF4-201ENST00000374198 SPRR2DP22532 72 aa4□□□□□ -1.77
PRPF4-201ENST00000374198 KRTAP4-3Q9BYR4 195 aa3.98□□□□□ -1.77
PRPF4-201ENST00000374198 KRTAP2-2Q9BYT5 123 aa3.88□□□□□ -1.79
PRPF4-201ENST00000374198 LCE3BQ5TA77 95 aa3.87□□□□□ -1.79
PRPF4-201ENST00000374198 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
PRPF4-201ENST00000374198 KRTAP4-9Q9BYQ8 210 aa3.85□□□□□ -1.79
PRPF4-201ENST00000374198 MT1MQ8N339 61 aa3.83□□□□□ -1.8
PRPF4-201ENST00000374198 PRM1P04553 51 aa3.83□□□□□ -1.8
PRPF4-201ENST00000374198 LCE5AQ5TCM9 118 aa3.83□□□□□ -1.8
PRPF4-201ENST00000374198 MT1AP04731 61 aa3.81□□□□□ -1.8
PRPF4-201ENST00000374198 KRTAP5-5Q701N2 237 aaPredicted RBP3.79□□□□□ -1.8
PRPF4-201ENST00000374198 LCE3DQ9BYE3 92 aa3.75□□□□□ -1.81
PRPF4-201ENST00000374198 LCE3EQ5T5B0 92 aa3.75□□□□□ -1.81
PRPF4-201ENST00000374198 DSTQ03001 7570 aaKnown RBP3.73□□□□□ -1.81
PRPF4-201ENST00000374198 SYNE1Q8NF91 8797 aaKnown RBP3.68□□□□□ -1.82
PRPF4-201ENST00000374198 KRTAP6-1Q3LI64 71 aa3.6□□□□□ -1.83
PRPF4-201ENST00000374198 KRTAP6-2Q3LI66 62 aa3.55□□□□□ -1.84
PRPF4-201ENST00000374198 KRTAP9-4Q9BYQ2 154 aa3.53□□□□□ -1.84
PRPF4-201ENST00000374198 LCE4AQ5TA78 99 aa3.51□□□□□ -1.85
PRPF4-201ENST00000374198 MT4P47944 62 aa3.5□□□□□ -1.85
PRPF4-201ENST00000374198 LCE1DQ5T752 114 aa3.49□□□□□ -1.85
PRPF4-201ENST00000374198 KRTAP5-4Q6L8H1 288 aa3.44□□□□□ -1.86
PRPF4-201ENST00000374198 KRTAP9-9Q9BYP9 154 aa3.4□□□□□ -1.86
PRPF4-201ENST00000374198 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
PRPF4-201ENST00000374198 HMCN1Q96RW7 5635 aa3.38□□□□□ -1.87
PRPF4-201ENST00000374198 GPR98Q8WXG9 6306 aa3.34□□□□□ -1.87
PRPF4-201ENST00000374198 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
PRPF4-201ENST00000374198 KRTAP20-2Q3LI61 65 aa3.26□□□□□ -1.89
PRPF4-201ENST00000374198 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
PRPF4-201ENST00000374198 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
PRPF4-201ENST00000374198 MUC5BQ9HC84 5762 aaPredicted RBP3.17□□□□□ -1.9
PRPF4-201ENST00000374198 KRTAP5-10Q6L8G5 202 aa3.16□□□□□ -1.9
PRPF4-201ENST00000374198 KRTAP5-3Q6L8H2 238 aa3.14□□□□□ -1.91
PRPF4-201ENST00000374198 LCE1FQ5T754 118 aa3.14□□□□□ -1.91
PRPF4-201ENST00000374198 MT3P25713 68 aa3.13□□□□□ -1.91
PRPF4-201ENST00000374198 KRTAP5-7Q6L8G8 165 aa3.08□□□□□ -1.92
PRPF4-201ENST00000374198 KRTAP5-2Q701N4 177 aa3.03□□□□□ -1.92
PRPF4-201ENST00000374198 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
PRPF4-201ENST00000374198 KRTAP4-11Q9BYQ6 195 aa2.96□□□□□ -1.94
PRPF4-201ENST00000374198 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
PRPF4-201ENST00000374198 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
PRPF4-201ENST00000374198 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
PRPF4-201ENST00000374198 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
PRPF4-201ENST00000374198 LCE1BQ5T7P3 118 aa2.53□□□□□ -2
PRPF4-201ENST00000374198 KRTAP4-2Q9BYR5 136 aa2.47□□□□□ -2.01
PRPF4-201ENST00000374198 KRTAP21-1Q3LI58 79 aa2.47□□□□□ -2.01
PRPF4-201ENST00000374198 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
PRPF4-201ENST00000374198 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
PRPF4-201ENST00000374198 MUC19Q7Z5P9 8384 aa2.29□□□□□ -2.04
PRPF4-201ENST00000374198 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.21□□□□□ -2.05
PRPF4-201ENST00000374198 KRTAP5-11Q6L8G4 156 aa2.2□□□□□ -2.06
PRPF4-201ENST00000374198 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
PRPF4-201ENST00000374198 PHGR1C9JFL3 82 aa1.9□□□□□ -2.11
PRPF4-201ENST00000374198 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 82.7 ms