RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 LCE1AQ5T7P2 110 aa6.3□□□□□ -1.4
C9orf43-202ENST00000374165 SPRR2EP22531 72 aa6.26□□□□□ -1.41
C9orf43-202ENST00000374165 SPRR2BP35325 72 aa6.26□□□□□ -1.41
C9orf43-202ENST00000374165 SPRR2AP35326 72 aa6.26□□□□□ -1.41
C9orf43-202ENST00000374165 MT1LQ93083 61 aa6.26□□□□□ -1.41
C9orf43-202ENST00000374165 KRTAP19-3Q7Z4W3 81 aa6.23□□□□□ -1.41
C9orf43-202ENST00000374165 SPRR5A0A1B0GTR4 108 aa6.22□□□□□ -1.41
C9orf43-202ENST00000374165 NEBP20929 6669 aa6.22□□□□□ -1.41
C9orf43-202ENST00000374165 LCE5AQ5TCM9 118 aa6.18□□□□□ -1.42
C9orf43-202ENST00000374165 MT1GP13640 62 aa6.13□□□□□ -1.43
C9orf43-202ENST00000374165 DSTQ03001 7570 aaKnown RBP6.11□□□□□ -1.43
C9orf43-202ENST00000374165 KRTAP4-7Q9BYR0 210 aa6.11□□□□□ -1.43
C9orf43-202ENST00000374165 MT1MQ8N339 61 aa6.08□□□□□ -1.44
C9orf43-202ENST00000374165 NDUFAF8A1L188 74 aa6.07□□□□□ -1.44
C9orf43-202ENST00000374165 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
C9orf43-202ENST00000374165 LUZP6Q538Z0 58 aa6.05□□□□□ -1.44
C9orf43-202ENST00000374165 SPRR2DP22532 72 aa6.03□□□□□ -1.44
C9orf43-202ENST00000374165 KRTAP4-3Q9BYR4 195 aa6.03□□□□□ -1.44
C9orf43-202ENST00000374165 KRTAP19-4Q3LI73 84 aa5.96□□□□□ -1.46
C9orf43-202ENST00000374165 LCE3BQ5TA77 95 aa5.82□□□□□ -1.48
C9orf43-202ENST00000374165 KRTAP9-6A8MVA2 160 aa5.81□□□□□ -1.48
C9orf43-202ENST00000374165 KRTAP2-3P0C7H8 128 aa5.77□□□□□ -1.49
C9orf43-202ENST00000374165 KRTAP2-4Q9BYR9 128 aa5.77□□□□□ -1.49
C9orf43-202ENST00000374165 KRTAP20-1Q3LI63 56 aa5.75□□□□□ -1.49
C9orf43-202ENST00000374165 LOC100996750A0A140TA64 210 aa5.75□□□□□ -1.49
C9orf43-202ENST00000374165 KRTAP2-2Q9BYT5 123 aa5.64□□□□□ -1.51
C9orf43-202ENST00000374165 KRTAP2-1Q9BYU5 128 aa5.64□□□□□ -1.51
C9orf43-202ENST00000374165 H3BS24 57 aa5.53□□□□□ -1.52
C9orf43-202ENST00000374165 KRTAP5-5Q701N2 237 aaPredicted RBP5.52□□□□□ -1.53
C9orf43-202ENST00000374165 KRTAP5-4Q6L8H1 288 aa5.4□□□□□ -1.54
C9orf43-202ENST00000374165 KRTAP4-9Q9BYQ8 210 aa5.35□□□□□ -1.55
C9orf43-202ENST00000374165 KRTAP6-1Q3LI64 71 aa5.31□□□□□ -1.56
C9orf43-202ENST00000374165 LCE4AQ5TA78 99 aa5.31□□□□□ -1.56
C9orf43-202ENST00000374165 SYNE1Q8NF91 8797 aaKnown RBP5.29□□□□□ -1.56
C9orf43-202ENST00000374165 A0A0A0MQY5 61 aa5.29□□□□□ -1.56
C9orf43-202ENST00000374165 MT1AP04731 61 aa5.29□□□□□ -1.56
C9orf43-202ENST00000374165 MT4P47944 62 aa5.29□□□□□ -1.56
C9orf43-202ENST00000374165 LCE1DQ5T752 114 aa5.24□□□□□ -1.57
C9orf43-202ENST00000374165 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
C9orf43-202ENST00000374165 HMCN1Q96RW7 5635 aa5.21□□□□□ -1.58
C9orf43-202ENST00000374165 KRTAP12-4P60329 112 aa5.14□□□□□ -1.59
C9orf43-202ENST00000374165 KRTAP20-2Q3LI61 65 aa5.07□□□□□ -1.6
C9orf43-202ENST00000374165 KRTAP9-4Q9BYQ2 154 aa5.07□□□□□ -1.6
C9orf43-202ENST00000374165 KRTAP6-2Q3LI66 62 aa4.94□□□□□ -1.62
C9orf43-202ENST00000374165 INE1O15225 51 aa4.93□□□□□ -1.62
C9orf43-202ENST00000374165 KRTAP5-3Q6L8H2 238 aa4.9□□□□□ -1.62
C9orf43-202ENST00000374165 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.63
C9orf43-202ENST00000374165 OBSCNQ5VST9 7968 aa4.82□□□□□ -1.64
C9orf43-202ENST00000374165 MT3P25713 68 aa4.79□□□□□ -1.64
C9orf43-202ENST00000374165 AHNAK2Q8IVF2 5795 aa4.68□□□□□ -1.66
C9orf43-202ENST00000374165 LCE3DQ9BYE3 92 aa4.58□□□□□ -1.68
C9orf43-202ENST00000374165 KRTAP5-10Q6L8G5 202 aa4.52□□□□□ -1.69
C9orf43-202ENST00000374165 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
C9orf43-202ENST00000374165 GPR98Q8WXG9 6306 aa4.46□□□□□ -1.7
C9orf43-202ENST00000374165 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
C9orf43-202ENST00000374165 KRTAP5-8O75690 187 aa4.33□□□□□ -1.72
C9orf43-202ENST00000374165 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
C9orf43-202ENST00000374165 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
C9orf43-202ENST00000374165 KRTAP5-7Q6L8G8 165 aa4.2□□□□□ -1.74
C9orf43-202ENST00000374165 MUC5ACP98088 5654 aa4.07□□□□□ -1.76
C9orf43-202ENST00000374165 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
C9orf43-202ENST00000374165 LCE1BQ5T7P3 118 aa4.02□□□□□ -1.77
C9orf43-202ENST00000374165 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
C9orf43-202ENST00000374165 PRM1P04553 51 aa3.98□□□□□ -1.77
C9orf43-202ENST00000374165 LCE1CQ5T751 118 aa3.96□□□□□ -1.78
C9orf43-202ENST00000374165 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
C9orf43-202ENST00000374165 MUC5BQ9HC84 5762 aaPredicted RBP3.81□□□□□ -1.8
C9orf43-202ENST00000374165 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.67□□□□□ -1.82
C9orf43-202ENST00000374165 AHNAKQ09666 5890 aaKnown RBP3.58□□□□□ -1.84
C9orf43-202ENST00000374165 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
C9orf43-202ENST00000374165 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
C9orf43-202ENST00000374165 LCE1FQ5T754 118 aa3.21□□□□□ -1.9
C9orf43-202ENST00000374165 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.9
C9orf43-202ENST00000374165 PHGR1C9JFL3 82 aa3.04□□□□□ -1.92
C9orf43-202ENST00000374165 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
C9orf43-202ENST00000374165 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
C9orf43-202ENST00000374165 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 218 ms