RNA–Protein interactions for RNA: ENST00000374029.1

GJB1-203, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GJB1, Length 1,587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-203ENST00000374029 MUC12Q9UKN1 5478 aa5.52□□□□□ -1.53
GJB1-203ENST00000374029 NEBP20929 6669 aa5.48□□□□□ -1.53
GJB1-203ENST00000374029 SPRR2EP22531 72 aa5.41□□□□□ -1.54
GJB1-203ENST00000374029 SPRR2BP35325 72 aa5.41□□□□□ -1.54
GJB1-203ENST00000374029 SPRR2AP35326 72 aa5.41□□□□□ -1.54
GJB1-203ENST00000374029 MDN1Q9NU22 5596 aa5.4□□□□□ -1.55
GJB1-203ENST00000374029 LCE1AQ5T7P2 110 aa5.38□□□□□ -1.55
GJB1-203ENST00000374029 KRTAP12-3P60328 96 aa5.33□□□□□ -1.56
GJB1-203ENST00000374029 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
GJB1-203ENST00000374029 MT1EP04732 61 aa5.28□□□□□ -1.56
GJB1-203ENST00000374029 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
GJB1-203ENST00000374029 KRTAP20-1Q3LI63 56 aa5.25□□□□□ -1.57
GJB1-203ENST00000374029 SPRR2DP22532 72 aa5.23□□□□□ -1.57
GJB1-203ENST00000374029 KRTAP2-3P0C7H8 128 aa5.19□□□□□ -1.58
GJB1-203ENST00000374029 KRTAP2-4Q9BYR9 128 aa5.19□□□□□ -1.58
GJB1-203ENST00000374029 KRTAP19-3Q7Z4W3 81 aa5.18□□□□□ -1.58
GJB1-203ENST00000374029 LCE5AQ5TCM9 118 aa5.16□□□□□ -1.58
GJB1-203ENST00000374029 MT1GP13640 62 aa5.09□□□□□ -1.59
GJB1-203ENST00000374029 MT1LQ93083 61 aa5.09□□□□□ -1.59
GJB1-203ENST00000374029 LCE3CQ5T5A8 94 aa5.07□□□□□ -1.6
GJB1-203ENST00000374029 KRTAP19-4Q3LI73 84 aa5.06□□□□□ -1.6
GJB1-203ENST00000374029 LCE3BQ5TA77 95 aa5.06□□□□□ -1.6
GJB1-203ENST00000374029 KRTAP2-2Q9BYT5 123 aa5.04□□□□□ -1.6
GJB1-203ENST00000374029 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
GJB1-203ENST00000374029 MT1MQ8N339 61 aa5□□□□□ -1.61
GJB1-203ENST00000374029 DSTQ03001 7570 aaKnown RBP4.93□□□□□ -1.62
GJB1-203ENST00000374029 KRTAP4-3Q9BYR4 195 aa4.84□□□□□ -1.63
GJB1-203ENST00000374029 KRTAP4-7Q9BYR0 210 aa4.82□□□□□ -1.64
GJB1-203ENST00000374029 KRTAP9-6A8MVA2 160 aa4.76□□□□□ -1.65
GJB1-203ENST00000374029 LCE4AQ5TA78 99 aa4.65□□□□□ -1.66
GJB1-203ENST00000374029 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
GJB1-203ENST00000374029 KRTAP4-9Q9BYQ8 210 aa4.61□□□□□ -1.67
GJB1-203ENST00000374029 LOC100996750A0A140TA64 210 aa4.56□□□□□ -1.68
GJB1-203ENST00000374029 LCE1DQ5T752 114 aa4.56□□□□□ -1.68
GJB1-203ENST00000374029 KRTAP5-5Q701N2 237 aaPredicted RBP4.56□□□□□ -1.68
GJB1-203ENST00000374029 MT4P47944 62 aa4.53□□□□□ -1.68
GJB1-203ENST00000374029 GPR98Q8WXG9 6306 aa4.53□□□□□ -1.68
GJB1-203ENST00000374029 HMCN1Q96RW7 5635 aa4.44□□□□□ -1.7
GJB1-203ENST00000374029 KRTAP4-6Q9BYQ5 205 aa4.43□□□□□ -1.7
GJB1-203ENST00000374029 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
GJB1-203ENST00000374029 MT1AP04731 61 aa4.34□□□□□ -1.71
GJB1-203ENST00000374029 KRTAP20-2Q3LI61 65 aa4.33□□□□□ -1.72
GJB1-203ENST00000374029 SYNE1Q8NF91 8797 aaKnown RBP4.31□□□□□ -1.72
GJB1-203ENST00000374029 KRTAP6-1Q3LI64 71 aa4.27□□□□□ -1.73
GJB1-203ENST00000374029 KRTAP5-3Q6L8H2 238 aa4.19□□□□□ -1.74
GJB1-203ENST00000374029 AHNAK2Q8IVF2 5795 aa4.16□□□□□ -1.74
GJB1-203ENST00000374029 KRTAP9-4Q9BYQ2 154 aa4.15□□□□□ -1.74
GJB1-203ENST00000374029 KRTAP5-2Q701N4 177 aa4.1□□□□□ -1.75
GJB1-203ENST00000374029 KRTAP5-10Q6L8G5 202 aa4.09□□□□□ -1.75
GJB1-203ENST00000374029 KRTAP6-2Q3LI66 62 aa4.04□□□□□ -1.76
GJB1-203ENST00000374029 LCE3EQ5T5B0 92 aa3.97□□□□□ -1.77
GJB1-203ENST00000374029 MT3P25713 68 aa3.96□□□□□ -1.78
GJB1-203ENST00000374029 LCE3DQ9BYE3 92 aa3.96□□□□□ -1.78
GJB1-203ENST00000374029 KRTAP5-7Q6L8G8 165 aa3.9□□□□□ -1.78
GJB1-203ENST00000374029 KRTAP4-11Q9BYQ6 195 aa3.88□□□□□ -1.79
GJB1-203ENST00000374029 PRM1P04553 51 aa3.84□□□□□ -1.8
GJB1-203ENST00000374029 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
GJB1-203ENST00000374029 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
GJB1-203ENST00000374029 KRTAP5-1Q6L8H4 278 aa3.6□□□□□ -1.83
GJB1-203ENST00000374029 LCE1EQ5T753 118 aa3.58□□□□□ -1.84
GJB1-203ENST00000374029 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
GJB1-203ENST00000374029 AHNAKQ09666 5890 aaKnown RBP3.47□□□□□ -1.85
GJB1-203ENST00000374029 MUC5ACP98088 5654 aa3.46□□□□□ -1.86
GJB1-203ENST00000374029 MUC5BQ9HC84 5762 aaPredicted RBP3.38□□□□□ -1.87
GJB1-203ENST00000374029 KRTAP4-2Q9BYR5 136 aa3.34□□□□□ -1.88
GJB1-203ENST00000374029 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
GJB1-203ENST00000374029 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
GJB1-203ENST00000374029 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.07□□□□□ -1.92
GJB1-203ENST00000374029 KRTAP5-11Q6L8G4 156 aa2.99□□□□□ -1.93
GJB1-203ENST00000374029 KRTAP4-12Q9BQ66 201 aa2.89□□□□□ -1.95
GJB1-203ENST00000374029 LCE1FQ5T754 118 aa2.84□□□□□ -1.95
GJB1-203ENST00000374029 KRTAP21-2Q3LI59 83 aa2.82□□□□□ -1.96
GJB1-203ENST00000374029 PHGR1C9JFL3 82 aa2.56□□□□□ -2
GJB1-203ENST00000374029 KRTAP21-1Q3LI58 79 aa2.56□□□□□ -2
GJB1-203ENST00000374029 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
GJB1-203ENST00000374029 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
GJB1-203ENST00000374029 MUC16Q8WXI7 14507 aa1.64□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 115.1 ms