RNA–Protein interactions for RNA: ENST00000373995.7

A1CF-203, Transcript of APOBEC1 complementation factor, humanhuman

TSL 2 BASIC

Gene A1CF, Length 2,211 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-203ENST00000373995 TNP1P09430 55 aa4.74□□□□□ -1.65
A1CF-203ENST00000373995 MUC12Q9UKN1 5478 aa4.7□□□□□ -1.66
A1CF-203ENST00000373995 SPRR2FQ96RM1 72 aa4.65□□□□□ -1.66
A1CF-203ENST00000373995 MDN1Q9NU22 5596 aa4.64□□□□□ -1.67
A1CF-203ENST00000373995 NEBP20929 6669 aa4.64□□□□□ -1.67
A1CF-203ENST00000373995 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
A1CF-203ENST00000373995 KRTAP19-7Q3SYF9 63 aa4.6□□□□□ -1.67
A1CF-203ENST00000373995 KRTAP19-4Q3LI73 84 aa4.56□□□□□ -1.68
A1CF-203ENST00000373995 KRTAP19-5Q3LI72 72 aa4.55□□□□□ -1.68
A1CF-203ENST00000373995 MT1EP04732 61 aa4.53□□□□□ -1.68
A1CF-203ENST00000373995 LCE1AQ5T7P2 110 aa4.52□□□□□ -1.69
A1CF-203ENST00000373995 SPRR2EP22531 72 aa4.49□□□□□ -1.69
A1CF-203ENST00000373995 SPRR2BP35325 72 aa4.49□□□□□ -1.69
A1CF-203ENST00000373995 SPRR2AP35326 72 aa4.49□□□□□ -1.69
A1CF-203ENST00000373995 KRTAP12-3P60328 96 aa4.45□□□□□ -1.7
A1CF-203ENST00000373995 LCE5AQ5TCM9 118 aa4.44□□□□□ -1.7
A1CF-203ENST00000373995 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
A1CF-203ENST00000373995 KRTAP4-7Q9BYR0 210 aa4.43□□□□□ -1.7
A1CF-203ENST00000373995 KRTAP19-3Q7Z4W3 81 aa4.41□□□□□ -1.7
A1CF-203ENST00000373995 MT1LQ93083 61 aa4.39□□□□□ -1.71
A1CF-203ENST00000373995 MT1GP13640 62 aa4.35□□□□□ -1.71
A1CF-203ENST00000373995 KRTAP5-3Q6L8H2 238 aa4.35□□□□□ -1.71
A1CF-203ENST00000373995 KRTAP9-9Q9BYP9 154 aa4.35□□□□□ -1.71
A1CF-203ENST00000373995 KRTAP9-4Q9BYQ2 154 aa4.35□□□□□ -1.71
A1CF-203ENST00000373995 SPRR2DP22532 72 aa4.33□□□□□ -1.72
A1CF-203ENST00000373995 MT1MQ8N339 61 aa4.28□□□□□ -1.72
A1CF-203ENST00000373995 DSTQ03001 7570 aaKnown RBP4.26□□□□□ -1.73
A1CF-203ENST00000373995 KRTAP20-1Q3LI63 56 aa4.25□□□□□ -1.73
A1CF-203ENST00000373995 KRTAP2-3P0C7H8 128 aa4.24□□□□□ -1.73
A1CF-203ENST00000373995 KRTAP2-4Q9BYR9 128 aa4.24□□□□□ -1.73
A1CF-203ENST00000373995 KRTAP4-2Q9BYR5 136 aa4.21□□□□□ -1.74
A1CF-203ENST00000373995 KRTAP4-12Q9BQ66 201 aa4.19□□□□□ -1.74
A1CF-203ENST00000373995 LCE1EQ5T753 118 aa4.18□□□□□ -1.74
A1CF-203ENST00000373995 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
A1CF-203ENST00000373995 KRTAP12-4P60329 112 aa4.17□□□□□ -1.74
A1CF-203ENST00000373995 LCE1DQ5T752 114 aa4.17□□□□□ -1.74
A1CF-203ENST00000373995 KRTAP4-3Q9BYR4 195 aa4.17□□□□□ -1.74
A1CF-203ENST00000373995 KRTAP2-1Q9BYU5 128 aa4.17□□□□□ -1.74
A1CF-203ENST00000373995 KRTAP4-9Q9BYQ8 210 aa4.15□□□□□ -1.74
A1CF-203ENST00000373995 LCE3CQ5T5A8 94 aa4.13□□□□□ -1.75
A1CF-203ENST00000373995 LCE4AQ5TA78 99 aa4.03□□□□□ -1.76
A1CF-203ENST00000373995 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
A1CF-203ENST00000373995 KRTAP5-5Q701N2 237 aaPredicted RBP3.93□□□□□ -1.78
A1CF-203ENST00000373995 KRTAP5-4Q6L8H1 288 aa3.9□□□□□ -1.78
A1CF-203ENST00000373995 KRTAP4-11Q9BYQ6 195 aa3.86□□□□□ -1.79
A1CF-203ENST00000373995 MT3P25713 68 aa3.85□□□□□ -1.79
A1CF-203ENST00000373995 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
A1CF-203ENST00000373995 SYNE1Q8NF91 8797 aaKnown RBP3.77□□□□□ -1.81
A1CF-203ENST00000373995 MT4P47944 62 aa3.76□□□□□ -1.81
A1CF-203ENST00000373995 MT1AP04731 61 aa3.73□□□□□ -1.81
A1CF-203ENST00000373995 KRTAP6-1Q3LI64 71 aa3.69□□□□□ -1.82
A1CF-203ENST00000373995 KRTAP20-2Q3LI61 65 aa3.64□□□□□ -1.83
A1CF-203ENST00000373995 PRM1P04553 51 aa3.57□□□□□ -1.84
A1CF-203ENST00000373995 LCE3EQ5T5B0 92 aa3.55□□□□□ -1.84
A1CF-203ENST00000373995 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
A1CF-203ENST00000373995 AHNAK2Q8IVF2 5795 aa3.48□□□□□ -1.85
A1CF-203ENST00000373995 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
A1CF-203ENST00000373995 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
A1CF-203ENST00000373995 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
A1CF-203ENST00000373995 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
A1CF-203ENST00000373995 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
A1CF-203ENST00000373995 KRTAP5-7Q6L8G8 165 aa3.16□□□□□ -1.9
A1CF-203ENST00000373995 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
A1CF-203ENST00000373995 KRTAP5-8O75690 187 aa3.13□□□□□ -1.91
A1CF-203ENST00000373995 MUC5BQ9HC84 5762 aaPredicted RBP3.07□□□□□ -1.92
A1CF-203ENST00000373995 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
A1CF-203ENST00000373995 MUC5ACP98088 5654 aa3□□□□□ -1.93
A1CF-203ENST00000373995 LCE1CQ5T751 118 aa2.84□□□□□ -1.96
A1CF-203ENST00000373995 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.96
A1CF-203ENST00000373995 AHNAKQ09666 5890 aaKnown RBP2.77□□□□□ -1.97
A1CF-203ENST00000373995 KRTAP4-4Q9BYR3 166 aa2.73□□□□□ -1.97
A1CF-203ENST00000373995 KRTAP5-11Q6L8G4 156 aa2.53□□□□□ -2
A1CF-203ENST00000373995 KRTAP21-1Q3LI58 79 aa2.5□□□□□ -2.01
A1CF-203ENST00000373995 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
A1CF-203ENST00000373995 KRTAP21-2Q3LI59 83 aa2.45□□□□□ -2.02
A1CF-203ENST00000373995 PHGR1C9JFL3 82 aa2.18□□□□□ -2.06
A1CF-203ENST00000373995 MUC16Q8WXI7 14507 aa1.4□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 138.6 ms