RNA–Protein interactions for RNA: ENST00000373891.2

CHPF-202, Transcript of chondroitin polymerizing factor, humanhuman

TSL 2 BASIC

Gene CHPF, Length 1,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-202ENST00000373891 MT1MQ8N339 61 aa7.24□□□□□ -1.25
CHPF-202ENST00000373891 KRTAP5-10Q6L8G5 202 aa7.21□□□□□ -1.26
CHPF-202ENST00000373891 KRTAP4-3Q9BYR4 195 aa7.17□□□□□ -1.26
CHPF-202ENST00000373891 KRTAP4-6Q9BYQ5 205 aa7.16□□□□□ -1.26
CHPF-202ENST00000373891 MT1LQ93083 61 aa7.15□□□□□ -1.26
CHPF-202ENST00000373891 KRTAP5-4Q6L8H1 288 aa7.12□□□□□ -1.27
CHPF-202ENST00000373891 UQCR11O14957 56 aa7.11□□□□□ -1.27
CHPF-202ENST00000373891 TNP1P09430 55 aa7.07□□□□□ -1.28
CHPF-202ENST00000373891 RPS28P62857 69 aaKnown RBP7.02□□□□□ -1.29
CHPF-202ENST00000373891 C10orf95Q9H7T3 257 aa7.01□□□□□ -1.29
CHPF-202ENST00000373891 KRTAP5-7Q6L8G8 165 aa6.97□□□□□ -1.29
CHPF-202ENST00000373891 V9GYY9 64 aa6.97□□□□□ -1.29
CHPF-202ENST00000373891 KRTAP5-3Q6L8H2 238 aa6.95□□□□□ -1.3
CHPF-202ENST00000373891 MIR22HGQ0VDD5 57 aa6.93□□□□□ -1.3
CHPF-202ENST00000373891 LCE3AQ5TA76 89 aa6.93□□□□□ -1.3
CHPF-202ENST00000373891 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
CHPF-202ENST00000373891 K7ERS5 55 aa6.87□□□□□ -1.31
CHPF-202ENST00000373891 Q1T7F1 81 aa6.86□□□□□ -1.31
CHPF-202ENST00000373891 KRTAP4-7Q9BYR0 210 aa6.86□□□□□ -1.31
CHPF-202ENST00000373891 PSPHP1O15172 72 aa6.83□□□□□ -1.32
CHPF-202ENST00000373891 KRTAP20-2Q3LI61 65 aa6.8□□□□□ -1.32
CHPF-202ENST00000373891 SPRR5A0A1B0GTR4 108 aa6.77□□□□□ -1.33
CHPF-202ENST00000373891 KRTAP25-1Q3LHN0 102 aa6.72□□□□□ -1.33
CHPF-202ENST00000373891 KRTAP12-3P60328 96 aa6.68□□□□□ -1.34
CHPF-202ENST00000373891 A6NED7 52 aa6.66□□□□□ -1.34
CHPF-202ENST00000373891 KRTAP5-5Q701N2 237 aaPredicted RBP6.64□□□□□ -1.35
CHPF-202ENST00000373891 KRTAP12-4P60329 112 aa6.59□□□□□ -1.35
CHPF-202ENST00000373891 SYNE1Q8NF91 8797 aaKnown RBP6.52□□□□□ -1.37
CHPF-202ENST00000373891 KRTAP23-1A1A580 65 aa6.49□□□□□ -1.37
CHPF-202ENST00000373891 H3BS24 57 aa6.49□□□□□ -1.37
CHPF-202ENST00000373891 CDC42SE1Q9NRR8 79 aa6.47□□□□□ -1.37
CHPF-202ENST00000373891 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
CHPF-202ENST00000373891 ROMO1P60602 79 aa6.34□□□□□ -1.39
CHPF-202ENST00000373891 KRTAP4-11Q9BYQ6 195 aa6.31□□□□□ -1.4
CHPF-202ENST00000373891 KRTAP15-1Q3LI76 137 aa6.29□□□□□ -1.4
CHPF-202ENST00000373891 KRTAP4-12Q9BQ66 201 aa6.22□□□□□ -1.41
CHPF-202ENST00000373891 BRK1Q8WUW1 75 aa6.2□□□□□ -1.42
CHPF-202ENST00000373891 KRTAP5-2Q701N4 177 aa6.16□□□□□ -1.42
CHPF-202ENST00000373891 LCE3CQ5T5A8 94 aa6.15□□□□□ -1.42
CHPF-202ENST00000373891 KRTAP5-8O75690 187 aa6.12□□□□□ -1.43
CHPF-202ENST00000373891 KRTAP6-1Q3LI64 71 aa6.1□□□□□ -1.43
CHPF-202ENST00000373891 AHNAKQ09666 5890 aaKnown RBP6.09□□□□□ -1.43
CHPF-202ENST00000373891 MUC5ACP98088 5654 aa6.08□□□□□ -1.44
CHPF-202ENST00000373891 MUC5BQ9HC84 5762 aaPredicted RBP6.06□□□□□ -1.44
CHPF-202ENST00000373891 MT1AP04731 61 aa6.06□□□□□ -1.44
CHPF-202ENST00000373891 OBSCNQ5VST9 7968 aa6.03□□□□□ -1.44
CHPF-202ENST00000373891 KRTAP9-9Q9BYP9 154 aa5.99□□□□□ -1.45
CHPF-202ENST00000373891 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
CHPF-202ENST00000373891 PRO0628Q9UI54 55 aa5.94□□□□□ -1.46
CHPF-202ENST00000373891 KRTAP6-2Q3LI66 62 aa5.92□□□□□ -1.46
CHPF-202ENST00000373891 PMAIP1Q13794 54 aa5.88□□□□□ -1.47
CHPF-202ENST00000373891 KRTAP9-6A8MVA2 160 aa5.76□□□□□ -1.49
CHPF-202ENST00000373891 KRTAP5-1Q6L8H4 278 aa5.63□□□□□ -1.51
CHPF-202ENST00000373891 MT3P25713 68 aa5.55□□□□□ -1.52
CHPF-202ENST00000373891 KTN1-AS1Q86SY8 53 aa5.55□□□□□ -1.52
CHPF-202ENST00000373891 PRAC1Q96KF2 57 aa5.46□□□□□ -1.54
CHPF-202ENST00000373891 KRTAP4-2Q9BYR5 136 aa5.37□□□□□ -1.55
CHPF-202ENST00000373891 SVIPQ8NHG7 77 aa5.2□□□□□ -1.58
CHPF-202ENST00000373891 LCE1EQ5T753 118 aa5.15□□□□□ -1.59
CHPF-202ENST00000373891 LCE1BQ5T7P3 118 aa5.03□□□□□ -1.6
CHPF-202ENST00000373891 LCE1CQ5T751 118 aa4.8□□□□□ -1.64
CHPF-202ENST00000373891 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
CHPF-202ENST00000373891 LCE3DQ9BYE3 92 aa4.48□□□□□ -1.69
CHPF-202ENST00000373891 KRTAP5-11Q6L8G4 156 aa4.41□□□□□ -1.7
CHPF-202ENST00000373891 LCE1FQ5T754 118 aa4.35□□□□□ -1.71
CHPF-202ENST00000373891 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.29□□□□□ -1.72
CHPF-202ENST00000373891 PHGR1C9JFL3 82 aa4.26□□□□□ -1.73
CHPF-202ENST00000373891 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
CHPF-202ENST00000373891 NDUFAF8A1L188 74 aa4.19□□□□□ -1.74
CHPF-202ENST00000373891 A0A0A0MQY5 61 aa4.01□□□□□ -1.77
CHPF-202ENST00000373891 KRTAP21-2Q3LI59 83 aa3.99□□□□□ -1.77
CHPF-202ENST00000373891 KRTAP4-4Q9BYR3 166 aa3.84□□□□□ -1.79
CHPF-202ENST00000373891 MUC19Q7Z5P9 8384 aa3.73□□□□□ -1.81
CHPF-202ENST00000373891 INE1O15225 51 aa3.55□□□□□ -1.84
CHPF-202ENST00000373891 PRM1P04553 51 aa3.22□□□□□ -1.89
CHPF-202ENST00000373891 KRTAP21-1Q3LI58 79 aa3.18□□□□□ -1.9
CHPF-202ENST00000373891 MUC16Q8WXI7 14507 aa2.59□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 9 ms