RNA–Protein interactions for RNA: ENST00000373833.10

RCC1-203, Transcript of regulator of chromosome condensation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RCC1, Length 2,844 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-203ENST00000373833 SPRR2FQ96RM1 72 aa3.92□□□□□ -1.78
RCC1-203ENST00000373833 KRTAP12-3P60328 96 aa3.91□□□□□ -1.78
RCC1-203ENST00000373833 KRTAP4-7Q9BYR0 210 aa3.85□□□□□ -1.79
RCC1-203ENST00000373833 KRTAP9-7A8MTY7 169 aa3.84□□□□□ -1.79
RCC1-203ENST00000373833 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
RCC1-203ENST00000373833 OBSCNQ5VST9 7968 aa3.78□□□□□ -1.8
RCC1-203ENST00000373833 KRTAP4-3Q9BYR4 195 aa3.77□□□□□ -1.81
RCC1-203ENST00000373833 SYNE1Q8NF91 8797 aaKnown RBP3.75□□□□□ -1.81
RCC1-203ENST00000373833 MT1EP04732 61 aa3.73□□□□□ -1.81
RCC1-203ENST00000373833 SPRR2EP22531 72 aa3.69□□□□□ -1.82
RCC1-203ENST00000373833 SPRR2BP35325 72 aa3.69□□□□□ -1.82
RCC1-203ENST00000373833 SPRR2AP35326 72 aa3.69□□□□□ -1.82
RCC1-203ENST00000373833 LCE3CQ5T5A8 94 aa3.65□□□□□ -1.83
RCC1-203ENST00000373833 MT1LQ93083 61 aa3.64□□□□□ -1.83
RCC1-203ENST00000373833 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
RCC1-203ENST00000373833 LCE1AQ5T7P2 110 aa3.63□□□□□ -1.83
RCC1-203ENST00000373833 NEBP20929 6669 aa3.62□□□□□ -1.83
RCC1-203ENST00000373833 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
RCC1-203ENST00000373833 KRTAP5-9P26371 169 aa3.61□□□□□ -1.83
RCC1-203ENST00000373833 KRTAP6-3Q3LI67 103 aa3.6□□□□□ -1.83
RCC1-203ENST00000373833 KRTAP2-2Q9BYT5 123 aa3.59□□□□□ -1.84
RCC1-203ENST00000373833 KRTAP19-3Q7Z4W3 81 aa3.58□□□□□ -1.84
RCC1-203ENST00000373833 MT1GP13640 62 aa3.54□□□□□ -1.84
RCC1-203ENST00000373833 MT1MQ8N339 61 aa3.53□□□□□ -1.84
RCC1-203ENST00000373833 LCE5AQ5TCM9 118 aa3.52□□□□□ -1.85
RCC1-203ENST00000373833 SPRR2DP22532 72 aa3.52□□□□□ -1.85
RCC1-203ENST00000373833 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
RCC1-203ENST00000373833 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
RCC1-203ENST00000373833 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
RCC1-203ENST00000373833 KRTAP19-4Q3LI73 84 aa3.43□□□□□ -1.86
RCC1-203ENST00000373833 LCE1EQ5T753 118 aa3.39□□□□□ -1.87
RCC1-203ENST00000373833 LCE3BQ5TA77 95 aa3.38□□□□□ -1.87
RCC1-203ENST00000373833 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
RCC1-203ENST00000373833 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
RCC1-203ENST00000373833 KRTAP4-9Q9BYQ8 210 aa3.32□□□□□ -1.88
RCC1-203ENST00000373833 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
RCC1-203ENST00000373833 MT4P47944 62 aa3.26□□□□□ -1.89
RCC1-203ENST00000373833 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
RCC1-203ENST00000373833 HMCN1Q96RW7 5635 aa3.2□□□□□ -1.9
RCC1-203ENST00000373833 KRTAP6-1Q3LI64 71 aa3.18□□□□□ -1.9
RCC1-203ENST00000373833 KRTAP9-4Q9BYQ2 154 aa3.18□□□□□ -1.9
RCC1-203ENST00000373833 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
RCC1-203ENST00000373833 GPR98Q8WXG9 6306 aa3.17□□□□□ -1.9
RCC1-203ENST00000373833 KRTAP5-5Q701N2 237 aaPredicted RBP3.09□□□□□ -1.91
RCC1-203ENST00000373833 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
RCC1-203ENST00000373833 PRM1P04553 51 aa3.01□□□□□ -1.93
RCC1-203ENST00000373833 MT1AP04731 61 aa3□□□□□ -1.93
RCC1-203ENST00000373833 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
RCC1-203ENST00000373833 LCE3EQ5T5B0 92 aa2.95□□□□□ -1.94
RCC1-203ENST00000373833 KRTAP5-4Q6L8H1 288 aa2.95□□□□□ -1.94
RCC1-203ENST00000373833 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.94
RCC1-203ENST00000373833 LCE4AQ5TA78 99 aa2.87□□□□□ -1.95
RCC1-203ENST00000373833 LCE3DQ9BYE3 92 aa2.87□□□□□ -1.95
RCC1-203ENST00000373833 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
RCC1-203ENST00000373833 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
RCC1-203ENST00000373833 AHNAK2Q8IVF2 5795 aa2.75□□□□□ -1.97
RCC1-203ENST00000373833 KRTAP5-3Q6L8H2 238 aa2.74□□□□□ -1.97
RCC1-203ENST00000373833 MT3P25713 68 aa2.73□□□□□ -1.97
RCC1-203ENST00000373833 MUC5ACP98088 5654 aa2.69□□□□□ -1.98
RCC1-203ENST00000373833 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
RCC1-203ENST00000373833 AHNAKQ09666 5890 aaKnown RBP2.67□□□□□ -1.98
RCC1-203ENST00000373833 KRTAP5-10Q6L8G5 202 aa2.66□□□□□ -1.98
RCC1-203ENST00000373833 MUC5BQ9HC84 5762 aaPredicted RBP2.65□□□□□ -1.98
RCC1-203ENST00000373833 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
RCC1-203ENST00000373833 KRTAP4-11Q9BYQ6 195 aa2.57□□□□□ -2
RCC1-203ENST00000373833 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
RCC1-203ENST00000373833 KRTAP5-8O75690 187 aa2.45□□□□□ -2.02
RCC1-203ENST00000373833 KRTAP5-1Q6L8H4 278 aa2.41□□□□□ -2.02
RCC1-203ENST00000373833 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
RCC1-203ENST00000373833 LCE1CQ5T751 118 aa2.21□□□□□ -2.06
RCC1-203ENST00000373833 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
RCC1-203ENST00000373833 KRTAP21-2Q3LI59 83 aa2.01□□□□□ -2.09
RCC1-203ENST00000373833 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.9□□□□□ -2.1
RCC1-203ENST00000373833 KRTAP5-11Q6L8G4 156 aa1.9□□□□□ -2.11
RCC1-203ENST00000373833 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
RCC1-203ENST00000373833 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
RCC1-203ENST00000373833 MUC16Q8WXI7 14507 aa1.06□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 83.4 ms