RNA–Protein interactions for RNA: ENST00000373742.6

PUM1-203, Transcript of pumilio RNA binding family member 1, humanhuman

TSL 2 BASIC

Gene PUM1, Length 3,515 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUM1-203ENST00000373742 MT1EP04732 61 aa3.12□□□□□ -1.91
PUM1-203ENST00000373742 DSTQ03001 7570 aaKnown RBP3.1□□□□□ -1.91
PUM1-203ENST00000373742 KRTAP9-6A0A140TA67 174 aa3.1□□□□□ -1.91
PUM1-203ENST00000373742 MT1LQ93083 61 aa3.09□□□□□ -1.91
PUM1-203ENST00000373742 KRTAP4-3Q9BYR4 195 aa3.06□□□□□ -1.92
PUM1-203ENST00000373742 MDN1Q9NU22 5596 aa3.04□□□□□ -1.92
PUM1-203ENST00000373742 LOC100996750A0A140TA64 210 aa3.01□□□□□ -1.93
PUM1-203ENST00000373742 SPRR2FQ96RM1 72 aa2.96□□□□□ -1.94
PUM1-203ENST00000373742 MT1GP13640 62 aa2.94□□□□□ -1.94
PUM1-203ENST00000373742 KRTAP19-3Q7Z4W3 81 aa2.93□□□□□ -1.94
PUM1-203ENST00000373742 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.93□□□□□ -1.94
PUM1-203ENST00000373742 MT1MQ8N339 61 aa2.93□□□□□ -1.94
PUM1-203ENST00000373742 LCE5AQ5TCM9 118 aa2.86□□□□□ -1.95
PUM1-203ENST00000373742 KRTAP2-3P0C7H8 128 aa2.84□□□□□ -1.95
PUM1-203ENST00000373742 KRTAP2-4Q9BYR9 128 aa2.84□□□□□ -1.95
PUM1-203ENST00000373742 KRTAP2-1Q9BYU5 128 aa2.84□□□□□ -1.95
PUM1-203ENST00000373742 KRTAP9-7A8MTY7 169 aa2.84□□□□□ -1.96
PUM1-203ENST00000373742 KRTAP19-4Q3LI73 84 aa2.8□□□□□ -1.96
PUM1-203ENST00000373742 SYNE1Q8NF91 8797 aaKnown RBP2.77□□□□□ -1.97
PUM1-203ENST00000373742 LCE1AQ5T7P2 110 aa2.77□□□□□ -1.97
PUM1-203ENST00000373742 KRTAP5-9P26371 169 aa2.74□□□□□ -1.97
PUM1-203ENST00000373742 SPRR2EP22531 72 aa2.73□□□□□ -1.97
PUM1-203ENST00000373742 SPRR2BP35325 72 aa2.73□□□□□ -1.97
PUM1-203ENST00000373742 SPRR2AP35326 72 aa2.73□□□□□ -1.97
PUM1-203ENST00000373742 KRTAP6-3Q3LI67 103 aa2.73□□□□□ -1.97
PUM1-203ENST00000373742 INE1O15225 51 aa2.7□□□□□ -1.98
PUM1-203ENST00000373742 NEBP20929 6669 aa2.68□□□□□ -1.98
PUM1-203ENST00000373742 LCE3BQ5TA77 95 aa2.68□□□□□ -1.98
PUM1-203ENST00000373742 KRTAP6-1Q3LI64 71 aa2.67□□□□□ -1.98
PUM1-203ENST00000373742 KRTAP4-9Q9BYQ8 210 aa2.66□□□□□ -1.98
PUM1-203ENST00000373742 OBSCNQ5VST9 7968 aa2.62□□□□□ -1.99
PUM1-203ENST00000373742 SPRR2DP22532 72 aa2.6□□□□□ -1.99
PUM1-203ENST00000373742 KRTAP5-5Q701N2 237 aaPredicted RBP2.6□□□□□ -1.99
PUM1-203ENST00000373742 MT1AP04731 61 aa2.56□□□□□ -2
PUM1-203ENST00000373742 KRTAP12-4P60329 112 aa2.52□□□□□ -2.01
PUM1-203ENST00000373742 KRTAP20-1Q3LI63 56 aa2.48□□□□□ -2.01
PUM1-203ENST00000373742 KRTAP9-4Q9BYQ2 154 aa2.44□□□□□ -2.02
PUM1-203ENST00000373742 KRTAP6-2Q3LI66 62 aa2.42□□□□□ -2.02
PUM1-203ENST00000373742 LCE3DQ9BYE3 92 aa2.4□□□□□ -2.03
PUM1-203ENST00000373742 KRTAP2-2Q9BYT5 123 aa2.38□□□□□ -2.03
PUM1-203ENST00000373742 KRTAP4-6Q9BYQ5 205 aa2.37□□□□□ -2.03
PUM1-203ENST00000373742 MT4P47944 62 aa2.36□□□□□ -2.03
PUM1-203ENST00000373742 HMCN1Q96RW7 5635 aa2.34□□□□□ -2.03
PUM1-203ENST00000373742 LCE3EQ5T5B0 92 aa2.33□□□□□ -2.04
PUM1-203ENST00000373742 KRTAP5-4Q6L8H1 288 aa2.33□□□□□ -2.04
PUM1-203ENST00000373742 MT3P25713 68 aa2.29□□□□□ -2.04
PUM1-203ENST00000373742 LCE1DQ5T752 114 aa2.25□□□□□ -2.05
PUM1-203ENST00000373742 KRTAP20-2Q3LI61 65 aa2.23□□□□□ -2.05
PUM1-203ENST00000373742 PRM1P04553 51 aa2.22□□□□□ -2.05
PUM1-203ENST00000373742 LCE4AQ5TA78 99 aa2.18□□□□□ -2.06
PUM1-203ENST00000373742 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
PUM1-203ENST00000373742 KRTAP5-3Q6L8H2 238 aa2.12□□□□□ -2.07
PUM1-203ENST00000373742 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
PUM1-203ENST00000373742 MUC5ACP98088 5654 aa2.04□□□□□ -2.08
PUM1-203ENST00000373742 AHNAK2Q8IVF2 5795 aa2.04□□□□□ -2.08
PUM1-203ENST00000373742 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
PUM1-203ENST00000373742 MUC19Q7Z5P9 8384 aa1.92□□□□□ -2.1
PUM1-203ENST00000373742 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
PUM1-203ENST00000373742 KRTAP4-11Q9BYQ6 195 aa1.9□□□□□ -2.11
PUM1-203ENST00000373742 KRTAP5-1Q6L8H4 278 aa1.89□□□□□ -2.11
PUM1-203ENST00000373742 LCE1EQ5T753 118 aa1.88□□□□□ -2.11
PUM1-203ENST00000373742 KRTAP4-2Q9BYR5 136 aa1.86□□□□□ -2.11
PUM1-203ENST00000373742 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
PUM1-203ENST00000373742 LCE1CQ5T751 118 aa1.8□□□□□ -2.12
PUM1-203ENST00000373742 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
PUM1-203ENST00000373742 KRTAP5-7Q6L8G8 165 aa1.73□□□□□ -2.13
PUM1-203ENST00000373742 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
PUM1-203ENST00000373742 KRTAP9-9Q9BYP9 154 aa1.68□□□□□ -2.14
PUM1-203ENST00000373742 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.66□□□□□ -2.14
PUM1-203ENST00000373742 KRTAP4-4Q9BYR3 166 aa1.66□□□□□ -2.14
PUM1-203ENST00000373742 KRTAP4-12Q9BQ66 201 aa1.63□□□□□ -2.15
PUM1-203ENST00000373742 LCE1FQ5T754 118 aa1.63□□□□□ -2.15
PUM1-203ENST00000373742 AHNAKQ09666 5890 aaKnown RBP1.58□□□□□ -2.16
PUM1-203ENST00000373742 KRTAP5-11Q6L8G4 156 aa1.55□□□□□ -2.16
PUM1-203ENST00000373742 PHGR1C9JFL3 82 aa1.37□□□□□ -2.19
PUM1-203ENST00000373742 KRTAP21-1Q3LI58 79 aa1.33□□□□□ -2.2
PUM1-203ENST00000373742 MUC16Q8WXI7 14507 aa0.88□□□□□ -2.27
Retrieved 77 of 20,778 RNA–protein pairs in 11.2 ms