RNA–Protein interactions for RNA: ENST00000373463.7

TMEM54-202, Transcript of transmembrane protein 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM54, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-202ENST00000373463 MT1MQ8N339 61 aa7.53□□□□□ -1.2
TMEM54-202ENST00000373463 PP632Q6XCG6 107 aa7.47□□□□□ -1.21
TMEM54-202ENST00000373463 PCP4P48539 62 aa7.4□□□□□ -1.22
TMEM54-202ENST00000373463 KRTAP12-3P60328 96 aa7.4□□□□□ -1.22
TMEM54-202ENST00000373463 KRTAP4-3Q9BYR4 195 aa7.4□□□□□ -1.22
TMEM54-202ENST00000373463 KRTAP25-1Q3LHN0 102 aa7.38□□□□□ -1.23
TMEM54-202ENST00000373463 K7ERS5 55 aa7.37□□□□□ -1.23
TMEM54-202ENST00000373463 RPS28P62857 69 aaKnown RBP7.35□□□□□ -1.23
TMEM54-202ENST00000373463 A6NED7 52 aa7.33□□□□□ -1.24
TMEM54-202ENST00000373463 KRTAP4-7Q9BYR0 210 aa7.28□□□□□ -1.24
TMEM54-202ENST00000373463 KRTAP4-9Q9BYQ8 210 aa7.27□□□□□ -1.25
TMEM54-202ENST00000373463 LCE1DQ5T752 114 aa7.13□□□□□ -1.27
TMEM54-202ENST00000373463 LCE4AQ5TA78 99 aa7.13□□□□□ -1.27
TMEM54-202ENST00000373463 KRTAP23-1A1A580 65 aa7.11□□□□□ -1.27
TMEM54-202ENST00000373463 KRTAP5-4Q6L8H1 288 aa7.1□□□□□ -1.27
TMEM54-202ENST00000373463 CDC42SE1Q9NRR8 79 aa7.06□□□□□ -1.28
TMEM54-202ENST00000373463 MT4P47944 62 aa7.04□□□□□ -1.28
TMEM54-202ENST00000373463 ROMO1P60602 79 aa7.01□□□□□ -1.29
TMEM54-202ENST00000373463 KRTAP15-1Q3LI76 137 aa6.96□□□□□ -1.3
TMEM54-202ENST00000373463 HMCN1Q96RW7 5635 aa6.94□□□□□ -1.3
TMEM54-202ENST00000373463 KRTAP5-5Q701N2 237 aaPredicted RBP6.92□□□□□ -1.3
TMEM54-202ENST00000373463 KRTAP4-6Q9BYQ5 205 aa6.92□□□□□ -1.3
TMEM54-202ENST00000373463 KRTAP19-4Q3LI73 84 aa6.91□□□□□ -1.3
TMEM54-202ENST00000373463 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
TMEM54-202ENST00000373463 LCE3CQ5T5A8 94 aa6.84□□□□□ -1.31
TMEM54-202ENST00000373463 GPR98Q8WXG9 6306 aa6.78□□□□□ -1.32
TMEM54-202ENST00000373463 KRTAP20-2Q3LI61 65 aa6.67□□□□□ -1.34
TMEM54-202ENST00000373463 AHNAK2Q8IVF2 5795 aa6.64□□□□□ -1.35
TMEM54-202ENST00000373463 SPRR5A0A1B0GTR4 108 aa6.62□□□□□ -1.35
TMEM54-202ENST00000373463 KRTAP12-4P60329 112 aa6.57□□□□□ -1.36
TMEM54-202ENST00000373463 KRTAP9-6A8MVA2 160 aa6.56□□□□□ -1.36
TMEM54-202ENST00000373463 SYNE1Q8NF91 8797 aaKnown RBP6.55□□□□□ -1.36
TMEM54-202ENST00000373463 KRTAP5-10Q6L8G5 202 aa6.55□□□□□ -1.36
TMEM54-202ENST00000373463 KRTAP5-3Q6L8H2 238 aa6.49□□□□□ -1.37
TMEM54-202ENST00000373463 MT1AP04731 61 aa6.45□□□□□ -1.38
TMEM54-202ENST00000373463 BRK1Q8WUW1 75 aa6.44□□□□□ -1.38
TMEM54-202ENST00000373463 KRTAP6-1Q3LI64 71 aa6.43□□□□□ -1.38
TMEM54-202ENST00000373463 KRTAP5-2Q701N4 177 aa6.26□□□□□ -1.41
TMEM54-202ENST00000373463 KRTAP5-7Q6L8G8 165 aa6.25□□□□□ -1.41
TMEM54-202ENST00000373463 KRTAP9-4Q9BYQ2 154 aa6.21□□□□□ -1.42
TMEM54-202ENST00000373463 KRTAP6-2Q3LI66 62 aa6.09□□□□□ -1.43
TMEM54-202ENST00000373463 PMAIP1Q13794 54 aa6.04□□□□□ -1.44
TMEM54-202ENST00000373463 KRTAP4-11Q9BYQ6 195 aa6.02□□□□□ -1.45
TMEM54-202ENST00000373463 PRAC1Q96KF2 57 aa5.89□□□□□ -1.47
TMEM54-202ENST00000373463 KRTAP5-8O75690 187 aa5.86□□□□□ -1.47
TMEM54-202ENST00000373463 MT3P25713 68 aa5.85□□□□□ -1.47
TMEM54-202ENST00000373463 OBSCNQ5VST9 7968 aa5.72□□□□□ -1.49
TMEM54-202ENST00000373463 PRO0628Q9UI54 55 aa5.69□□□□□ -1.5
TMEM54-202ENST00000373463 KRTAP5-1Q6L8H4 278 aa5.58□□□□□ -1.52
TMEM54-202ENST00000373463 KTN1-AS1Q86SY8 53 aa5.43□□□□□ -1.54
TMEM54-202ENST00000373463 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
TMEM54-202ENST00000373463 MUC5BQ9HC84 5762 aaPredicted RBP5.41□□□□□ -1.54
TMEM54-202ENST00000373463 MUC5ACP98088 5654 aa5.39□□□□□ -1.55
TMEM54-202ENST00000373463 LCE1EQ5T753 118 aa5.35□□□□□ -1.55
TMEM54-202ENST00000373463 AHNAKQ09666 5890 aaKnown RBP5.35□□□□□ -1.55
TMEM54-202ENST00000373463 SVIPQ8NHG7 77 aa5.16□□□□□ -1.58
TMEM54-202ENST00000373463 KRTAP4-2Q9BYR5 136 aa5.11□□□□□ -1.59
TMEM54-202ENST00000373463 LCE1BQ5T7P3 118 aa5.02□□□□□ -1.61
TMEM54-202ENST00000373463 LCE1CQ5T751 118 aa4.97□□□□□ -1.61
TMEM54-202ENST00000373463 LCE3DQ9BYE3 92 aa4.93□□□□□ -1.62
TMEM54-202ENST00000373463 LUZP6Q538Z0 58 aa4.79□□□□□ -1.64
TMEM54-202ENST00000373463 LCE3EQ5T5B0 92 aa4.67□□□□□ -1.66
TMEM54-202ENST00000373463 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.57□□□□□ -1.68
TMEM54-202ENST00000373463 KRTAP4-12Q9BQ66 201 aa4.54□□□□□ -1.68
TMEM54-202ENST00000373463 KRTAP5-11Q6L8G4 156 aa4.5□□□□□ -1.69
TMEM54-202ENST00000373463 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
TMEM54-202ENST00000373463 KRTAP21-2Q3LI59 83 aa4.26□□□□□ -1.73
TMEM54-202ENST00000373463 NDUFAF8A1L188 74 aa4.02□□□□□ -1.77
TMEM54-202ENST00000373463 PHGR1C9JFL3 82 aa3.89□□□□□ -1.79
TMEM54-202ENST00000373463 KRTAP4-4Q9BYR3 166 aa3.86□□□□□ -1.79
TMEM54-202ENST00000373463 PRM1P04553 51 aa3.61□□□□□ -1.83
TMEM54-202ENST00000373463 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.85
TMEM54-202ENST00000373463 INE1O15225 51 aa3.17□□□□□ -1.9
TMEM54-202ENST00000373463 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
TMEM54-202ENST00000373463 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
TMEM54-202ENST00000373463 H3BS24 57 aa2.81□□□□□ -1.96
TMEM54-202ENST00000373463 MUC16Q8WXI7 14507 aa2.51□□□□□ -2.01
Retrieved 77 of 20,778 RNA–protein pairs in 14.5 ms