RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 KRTAP9-6A0A140TA67 174 aa2.83□□□□□ -1.96
GARNL3-201ENST00000373386 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
GARNL3-201ENST00000373386 KRTAP19-6Q3LI70 58 aa2.83□□□□□ -1.96
GARNL3-201ENST00000373386 KMT2DO14686 5537 aa2.82□□□□□ -1.96
GARNL3-201ENST00000373386 LCE1EQ5T753 118 aa2.82□□□□□ -1.96
GARNL3-201ENST00000373386 KRTAP9-6A8MVA2 160 aa2.79□□□□□ -1.96
GARNL3-201ENST00000373386 KRTAP4-8A0A0G2JLE6 195 aa2.79□□□□□ -1.96
GARNL3-201ENST00000373386 KRTAP4-8Q9BYQ9 185 aa2.79□□□□□ -1.96
GARNL3-201ENST00000373386 MT1EP04732 61 aa2.77□□□□□ -1.97
GARNL3-201ENST00000373386 CRCT1Q9UGL9 99 aa2.77□□□□□ -1.97
GARNL3-201ENST00000373386 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
GARNL3-201ENST00000373386 MT1LQ93083 61 aa2.76□□□□□ -1.97
GARNL3-201ENST00000373386 LCE1DQ5T752 114 aa2.71□□□□□ -1.98
GARNL3-201ENST00000373386 KRTAP4-7Q9BYR0 210 aa2.7□□□□□ -1.98
GARNL3-201ENST00000373386 MACF1Q9UPN3 7388 aaKnown RBP2.69□□□□□ -1.98
GARNL3-201ENST00000373386 SYNE2Q8WXH0 6885 aaKnown RBP2.63□□□□□ -1.99
GARNL3-201ENST00000373386 MT1GP13640 62 aa2.62□□□□□ -1.99
GARNL3-201ENST00000373386 MUC12Q9UKN1 5478 aa2.61□□□□□ -1.99
GARNL3-201ENST00000373386 LOC100996750A0A140TA64 210 aa2.6□□□□□ -1.99
GARNL3-201ENST00000373386 KRTAP4-6Q9BYQ5 205 aa2.6□□□□□ -1.99
GARNL3-201ENST00000373386 KRTAP19-3Q7Z4W3 81 aa2.6□□□□□ -1.99
GARNL3-201ENST00000373386 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.58□□□□□ -2
GARNL3-201ENST00000373386 MT1MQ8N339 61 aa2.57□□□□□ -2
GARNL3-201ENST00000373386 MDN1Q9NU22 5596 aa2.54□□□□□ -2
GARNL3-201ENST00000373386 KRTAP9-4Q9BYQ2 154 aa2.53□□□□□ -2
GARNL3-201ENST00000373386 PRM1P04553 51 aa2.52□□□□□ -2.01
GARNL3-201ENST00000373386 KRTAP5-9P26371 169 aa2.51□□□□□ -2.01
GARNL3-201ENST00000373386 KRTAP4-3Q9BYR4 195 aa2.5□□□□□ -2.01
GARNL3-201ENST00000373386 SPRR2FQ96RM1 72 aa2.5□□□□□ -2.01
GARNL3-201ENST00000373386 MT3P25713 68 aa2.48□□□□□ -2.01
GARNL3-201ENST00000373386 KRTAP9-7A8MTY7 169 aa2.44□□□□□ -2.02
GARNL3-201ENST00000373386 MT1AP04731 61 aa2.41□□□□□ -2.02
GARNL3-201ENST00000373386 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
GARNL3-201ENST00000373386 SPRR2EP22531 72 aa2.37□□□□□ -2.03
GARNL3-201ENST00000373386 SPRR2BP35325 72 aa2.37□□□□□ -2.03
GARNL3-201ENST00000373386 SPRR2AP35326 72 aa2.37□□□□□ -2.03
GARNL3-201ENST00000373386 DSTQ03001 7570 aaKnown RBP2.37□□□□□ -2.03
GARNL3-201ENST00000373386 LCE3BQ5TA77 95 aa2.35□□□□□ -2.03
GARNL3-201ENST00000373386 NEBP20929 6669 aa2.35□□□□□ -2.03
GARNL3-201ENST00000373386 KRTAP5-5Q701N2 237 aaPredicted RBP2.34□□□□□ -2.03
GARNL3-201ENST00000373386 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
GARNL3-201ENST00000373386 KRTAP4-12Q9BQ66 201 aa2.32□□□□□ -2.04
GARNL3-201ENST00000373386 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
GARNL3-201ENST00000373386 KRTAP9-9Q9BYP9 154 aa2.31□□□□□ -2.04
GARNL3-201ENST00000373386 KRTAP6-1Q3LI64 71 aa2.29□□□□□ -2.04
GARNL3-201ENST00000373386 SPRR2DP22532 72 aa2.28□□□□□ -2.04
GARNL3-201ENST00000373386 KRTAP4-9Q9BYQ8 210 aa2.28□□□□□ -2.04
GARNL3-201ENST00000373386 OBSCNQ5VST9 7968 aa2.26□□□□□ -2.05
GARNL3-201ENST00000373386 KRTAP6-2Q3LI66 62 aa2.17□□□□□ -2.06
GARNL3-201ENST00000373386 KRTAP20-1Q3LI63 56 aa2.13□□□□□ -2.07
GARNL3-201ENST00000373386 KRTAP5-4Q6L8H1 288 aa2.09□□□□□ -2.08
GARNL3-201ENST00000373386 LCE4AQ5TA78 99 aa2.08□□□□□ -2.08
GARNL3-201ENST00000373386 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
GARNL3-201ENST00000373386 HMCN1Q96RW7 5635 aa2.03□□□□□ -2.08
GARNL3-201ENST00000373386 MT4P47944 62 aa2.02□□□□□ -2.09
GARNL3-201ENST00000373386 KRTAP5-3Q6L8H2 238 aa2□□□□□ -2.09
GARNL3-201ENST00000373386 KRTAP4-11Q9BYQ6 195 aa2□□□□□ -2.09
GARNL3-201ENST00000373386 KRTAP4-2Q9BYR5 136 aa1.99□□□□□ -2.09
GARNL3-201ENST00000373386 KRTAP5-2Q701N4 177 aa1.96□□□□□ -2.1
GARNL3-201ENST00000373386 KRTAP20-2Q3LI61 65 aa1.95□□□□□ -2.1
GARNL3-201ENST00000373386 LCE1CQ5T751 118 aa1.86□□□□□ -2.11
GARNL3-201ENST00000373386 LCE1BQ5T7P3 118 aa1.86□□□□□ -2.11
GARNL3-201ENST00000373386 AHNAK2Q8IVF2 5795 aa1.81□□□□□ -2.12
GARNL3-201ENST00000373386 GPR98Q8WXG9 6306 aa1.77□□□□□ -2.13
GARNL3-201ENST00000373386 KRTAP5-10Q6L8G5 202 aa1.71□□□□□ -2.14
GARNL3-201ENST00000373386 KRTAP5-1Q6L8H4 278 aa1.7□□□□□ -2.14
GARNL3-201ENST00000373386 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
GARNL3-201ENST00000373386 MUC5ACP98088 5654 aa1.69□□□□□ -2.14
GARNL3-201ENST00000373386 KRTAP5-8O75690 187 aa1.66□□□□□ -2.14
GARNL3-201ENST00000373386 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.64□□□□□ -2.15
GARNL3-201ENST00000373386 MUC5BQ9HC84 5762 aaPredicted RBP1.6□□□□□ -2.15
GARNL3-201ENST00000373386 KRTAP5-7Q6L8G8 165 aa1.6□□□□□ -2.15
GARNL3-201ENST00000373386 KRTAP21-2Q3LI59 83 aa1.53□□□□□ -2.17
GARNL3-201ENST00000373386 AHNAKQ09666 5890 aaKnown RBP1.46□□□□□ -2.18
GARNL3-201ENST00000373386 KRTAP5-11Q6L8G4 156 aa1.45□□□□□ -2.18
GARNL3-201ENST00000373386 KRTAP4-4Q9BYR3 166 aa1.31□□□□□ -2.2
GARNL3-201ENST00000373386 PHGR1C9JFL3 82 aa1.23□□□□□ -2.21
GARNL3-201ENST00000373386 MUC16Q8WXI7 14507 aa0.86□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 42.4 ms