RNA–Protein interactions for RNA: ENST00000373055.5

CDCA8-202, Transcript of cell division cycle associated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA8, Length 2,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8-202ENST00000373055 SYNE2Q8WXH0 6885 aaKnown RBP3.53□□□□□ -1.84
CDCA8-202ENST00000373055 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
CDCA8-202ENST00000373055 KRTAP19-7Q3SYF9 63 aa3.5□□□□□ -1.85
CDCA8-202ENST00000373055 KRTAP9-6A0A140TA67 174 aa3.44□□□□□ -1.86
CDCA8-202ENST00000373055 DSTQ03001 7570 aaKnown RBP3.41□□□□□ -1.86
CDCA8-202ENST00000373055 MT1EP04732 61 aa3.41□□□□□ -1.86
CDCA8-202ENST00000373055 MDN1Q9NU22 5596 aa3.4□□□□□ -1.87
CDCA8-202ENST00000373055 KRTAP19-4Q3LI73 84 aa3.37□□□□□ -1.87
CDCA8-202ENST00000373055 MT1LQ93083 61 aa3.35□□□□□ -1.87
CDCA8-202ENST00000373055 SPRR2FQ96RM1 72 aa3.34□□□□□ -1.87
CDCA8-202ENST00000373055 KRTAP4-7Q9BYR0 210 aa3.34□□□□□ -1.87
CDCA8-202ENST00000373055 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.3□□□□□ -1.88
CDCA8-202ENST00000373055 KRTAP5-9P26371 169 aa3.27□□□□□ -1.89
CDCA8-202ENST00000373055 KRTAP19-3Q7Z4W3 81 aa3.26□□□□□ -1.89
CDCA8-202ENST00000373055 KRTAP4-3Q9BYR4 195 aa3.24□□□□□ -1.89
CDCA8-202ENST00000373055 MT1GP13640 62 aa3.22□□□□□ -1.89
CDCA8-202ENST00000373055 LCE5AQ5TCM9 118 aa3.21□□□□□ -1.89
CDCA8-202ENST00000373055 MT1MQ8N339 61 aa3.21□□□□□ -1.89
CDCA8-202ENST00000373055 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
CDCA8-202ENST00000373055 LCE1AQ5T7P2 110 aa3.19□□□□□ -1.9
CDCA8-202ENST00000373055 KRTAP12-4P60329 112 aa3.19□□□□□ -1.9
CDCA8-202ENST00000373055 LOC100996750A0A140TA64 210 aa3.17□□□□□ -1.9
CDCA8-202ENST00000373055 KRTAP4-6Q9BYQ5 205 aa3.17□□□□□ -1.9
CDCA8-202ENST00000373055 SPRR2EP22531 72 aa3.15□□□□□ -1.9
CDCA8-202ENST00000373055 SPRR2BP35325 72 aa3.15□□□□□ -1.9
CDCA8-202ENST00000373055 SPRR2AP35326 72 aa3.15□□□□□ -1.9
CDCA8-202ENST00000373055 KRTAP9-7A8MTY7 169 aa3.12□□□□□ -1.91
CDCA8-202ENST00000373055 NEBP20929 6669 aa3.04□□□□□ -1.92
CDCA8-202ENST00000373055 SPRR2DP22532 72 aa3.03□□□□□ -1.92
CDCA8-202ENST00000373055 SYNE1Q8NF91 8797 aaKnown RBP3.02□□□□□ -1.93
CDCA8-202ENST00000373055 MT1AP04731 61 aa2.93□□□□□ -1.94
CDCA8-202ENST00000373055 LCE3BQ5TA77 95 aa2.92□□□□□ -1.94
CDCA8-202ENST00000373055 OBSCNQ5VST9 7968 aa2.91□□□□□ -1.94
CDCA8-202ENST00000373055 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
CDCA8-202ENST00000373055 PRM1P04553 51 aa2.86□□□□□ -1.95
CDCA8-202ENST00000373055 KRTAP6-1Q3LI64 71 aa2.85□□□□□ -1.95
CDCA8-202ENST00000373055 KRTAP4-9Q9BYQ8 210 aa2.85□□□□□ -1.95
CDCA8-202ENST00000373055 LCE3EQ5T5B0 92 aa2.84□□□□□ -1.96
CDCA8-202ENST00000373055 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.96
CDCA8-202ENST00000373055 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
CDCA8-202ENST00000373055 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
CDCA8-202ENST00000373055 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
CDCA8-202ENST00000373055 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
CDCA8-202ENST00000373055 KRTAP9-4Q9BYQ2 154 aa2.69□□□□□ -1.98
CDCA8-202ENST00000373055 MT4P47944 62 aa2.67□□□□□ -1.98
CDCA8-202ENST00000373055 KRTAP6-2Q3LI66 62 aa2.67□□□□□ -1.98
CDCA8-202ENST00000373055 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
CDCA8-202ENST00000373055 LCE4AQ5TA78 99 aa2.65□□□□□ -1.99
CDCA8-202ENST00000373055 LCE1EQ5T753 118 aa2.62□□□□□ -1.99
CDCA8-202ENST00000373055 LCE1DQ5T752 114 aa2.61□□□□□ -1.99
CDCA8-202ENST00000373055 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
CDCA8-202ENST00000373055 MT3P25713 68 aa2.54□□□□□ -2
CDCA8-202ENST00000373055 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
CDCA8-202ENST00000373055 KRTAP9-9Q9BYP9 154 aa2.47□□□□□ -2.01
CDCA8-202ENST00000373055 KRTAP4-12Q9BQ66 201 aa2.4□□□□□ -2.03
CDCA8-202ENST00000373055 KRTAP4-2Q9BYR5 136 aa2.36□□□□□ -2.03
CDCA8-202ENST00000373055 LCE1FQ5T754 118 aa2.32□□□□□ -2.04
CDCA8-202ENST00000373055 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
CDCA8-202ENST00000373055 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
CDCA8-202ENST00000373055 KRTAP4-11Q9BYQ6 195 aa2.23□□□□□ -2.05
CDCA8-202ENST00000373055 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
CDCA8-202ENST00000373055 MUC5ACP98088 5654 aa2.17□□□□□ -2.06
CDCA8-202ENST00000373055 KRTAP5-1Q6L8H4 278 aa2.17□□□□□ -2.06
CDCA8-202ENST00000373055 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
CDCA8-202ENST00000373055 KRTAP5-8O75690 187 aa2.15□□□□□ -2.06
CDCA8-202ENST00000373055 LCE1BQ5T7P3 118 aa2.14□□□□□ -2.07
CDCA8-202ENST00000373055 LCE1CQ5T751 118 aa2.06□□□□□ -2.08
CDCA8-202ENST00000373055 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
CDCA8-202ENST00000373055 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.92□□□□□ -2.1
CDCA8-202ENST00000373055 KRTAP21-1Q3LI58 79 aa1.89□□□□□ -2.11
CDCA8-202ENST00000373055 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
CDCA8-202ENST00000373055 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
CDCA8-202ENST00000373055 KRTAP5-11Q6L8G4 156 aa1.81□□□□□ -2.12
CDCA8-202ENST00000373055 AHNAKQ09666 5890 aaKnown RBP1.78□□□□□ -2.12
CDCA8-202ENST00000373055 KRTAP4-4Q9BYR3 166 aa1.76□□□□□ -2.13
CDCA8-202ENST00000373055 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
CDCA8-202ENST00000373055 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 63 ms